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Mouse SNP Summary
Symbol
Name
ID
Cpgi19545
CpG island 19545
MGI:5684619

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255701124
MGI SNP Detail
Chr7:105434085 Cpgi19545 1946 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230617112
MGI SNP Detail
Chr7:105434156 Cpgi19545 1875 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255006412
MGI SNP Detail
Chr7:105434159 Cpgi19545 1872 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216397424
MGI SNP Detail
Chr7:105434179 Cpgi19545 1852 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs240372882
MGI SNP Detail
Chr7:105434332 Cpgi19545 1699 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247664539
MGI SNP Detail
Chr7:105434366 Cpgi19545 1665 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs217012226
MGI SNP Detail
Chr7:105434367 Cpgi19545 1664 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231014205
MGI SNP Detail
Chr7:105434383 Cpgi19545 1648 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248250192
MGI SNP Detail
Chr7:105434451 Cpgi19545 1580 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs255940886
MGI SNP Detail
Chr7:105434504 Cpgi19545 1527 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G G A
rs236265768
MGI SNP Detail
Chr7:105434690 Cpgi19545 1341 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263487292
MGI SNP Detail
Chr7:105434696 Cpgi19545 1335 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224335086
MGI SNP Detail
Chr7:105434703 Cpgi19545 1328 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs247665281
MGI SNP Detail
Chr7:105434751 Cpgi19545 1280 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261147072
MGI SNP Detail
Chr7:105434779 Cpgi19545 1252 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G T G G G G G G G G G G G G
rs222671456
MGI SNP Detail
Chr7:105434846 Cpgi19545 1185 bp proximal
Dchs1 within coordinates of
Gm57787 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238066958
MGI SNP Detail
Chr7:105434905 Cpgi19545 1126 bp proximal
Dchs1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226422373
MGI SNP Detail
Chr7:105434942 Cpgi19545 1089 bp proximal
Dchs1 within coordinates of
SNP A/G A G
rs230829078
MGI SNP Detail
Chr7:105435056 Cpgi19545 975 bp proximal
Dchs1 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs244803817
MGI SNP Detail
Chr7:105435115 Cpgi19545 916 bp proximal
Dchs1 within coordinates of
SNP C/T T C
rs265655672
MGI SNP Detail
Chr7:105435333 Cpgi19545 698 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231410305
MGI SNP Detail
Chr7:105435361 Cpgi19545 670 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247719259
MGI SNP Detail
Chr7:105435364 Cpgi19545 667 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215669060
MGI SNP Detail
Chr7:105435475 Cpgi19545 556 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP G/T T G
rs230942234
MGI SNP Detail
Chr7:105435484 Cpgi19545 547 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242699720
MGI SNP Detail
Chr7:105435616 Cpgi19545 415 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215182980
MGI SNP Detail
Chr7:105435625 Cpgi19545 406 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs239579016
MGI SNP Detail
Chr7:105435750 Cpgi19545 281 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G A G
rs259503401
MGI SNP Detail
Chr7:105435905 Cpgi19545 126 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254427838
MGI SNP Detail
Chr7:105435940 Cpgi19545 91 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G G A
rs217702062
MGI SNP Detail
Chr7:105435972 Cpgi19545 59 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T T C
rs254581984
MGI SNP Detail
Chr7:105435973 Cpgi19545 58 bp proximal
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222575893
MGI SNP Detail
Chr7:105436125 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237933202
MGI SNP Detail
Chr7:105436287 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256046198
MGI SNP Detail
Chr7:105436410 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235819854
MGI SNP Detail
Chr7:105436445 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C T
rs223300064
MGI SNP Detail
Chr7:105436532 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245593850
MGI SNP Detail
Chr7:105436597 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263389718
MGI SNP Detail
Chr7:105436645 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T C T C C T T T C T T T T C C T T C T T C T T T T T T C C T C C C
rs231885228
MGI SNP Detail
Chr7:105436678 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A G A A A A A G A A A A A A A G A A A A
rs241367251
MGI SNP Detail
Chr7:105436685 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258700867
MGI SNP Detail
Chr7:105436702 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224751618
MGI SNP Detail
Chr7:105436733 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs586457507
MGI SNP Detail
Chr7:105436761 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
Tssr74107 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C T C C C C C C C C C C C C C T
rs578337908
MGI SNP Detail
Chr7:105436839 Cpgi19545 within coordinates of
Dchs1 within coordinates of
Rr652815 within coordinates of
Tssr74108 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C
rs242529836
MGI SNP Detail
Chr7:105437024 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215654499
MGI SNP Detail
Chr7:105437027 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230427213
MGI SNP Detail
Chr7:105437058 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258375668
MGI SNP Detail
Chr7:105437168 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215853710
MGI SNP Detail
Chr7:105437187 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236441185
MGI SNP Detail
Chr7:105437210 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254642337
MGI SNP Detail
Chr7:105437253 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G C G G G G G G G G G G G G
rs213046436
MGI SNP Detail
Chr7:105437254 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230487333
MGI SNP Detail
Chr7:105437277 Cpgi19545 within coordinates of
Rr652816 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582051913
MGI SNP Detail
Chr7:105437525 Cpgi19545 246 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261181558
MGI SNP Detail
Chr7:105437583 Cpgi19545 304 bp distal
SNP C/T T C
rs223141436
MGI SNP Detail
Chr7:105437610 Cpgi19545 331 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31650207
MGI SNP Detail
Chr7:105437651 Cpgi19545 372 bp distal
SNP G/T T T G T T G
rs263325577
MGI SNP Detail
Chr7:105437737 Cpgi19545 458 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220489197
MGI SNP Detail
Chr7:105437895 Cpgi19545 616 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241246682
MGI SNP Detail
Chr7:105438122 Cpgi19545 843 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs258724410
MGI SNP Detail
Chr7:105438287 Cpgi19545 1008 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224043817
MGI SNP Detail
Chr7:105438314 Cpgi19545 1035 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236166925
MGI SNP Detail
Chr7:105438412 Cpgi19545 1133 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262897558
MGI SNP Detail
Chr7:105438559 Cpgi19545 1280 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230514391
MGI SNP Detail
Chr7:105438736 Cpgi19545 1457 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231635584
MGI SNP Detail
Chr7:105438742 Cpgi19545 1463 bp distal
SNP C/T T C
rs216626138
MGI SNP Detail
Chr7:105438768 Cpgi19545 1489 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229335087
MGI SNP Detail
Chr7:105438796 Cpgi19545 1517 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs248047673
MGI SNP Detail
Chr7:105438980 Cpgi19545 1701 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213064642
MGI SNP Detail
Chr7:105439053 Cpgi19545 1774 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230008069
MGI SNP Detail
Chr7:105439179 Cpgi19545 1900 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260808468
MGI SNP Detail
Chr7:105439223 Cpgi19545 1944 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252103923
MGI SNP Detail
Chr7:105439233 Cpgi19545 1954 bp distal
SNP A/T T A
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Showing SNP(s) 1 - 74 of 74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory