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Mouse SNP Summary
Symbol
Name
ID 		Cpgi19616
CpG island 19616
MGI:5684690

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232661916
MGI SNP Detail		 Chr7:117840285 Cpgi19616 1826 bp proximal
Smg1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586637774
MGI SNP Detail		 Chr7:117840358 Cpgi19616 1753 bp proximal
Smg1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A
rs32499311
MGI SNP Detail		 Chr7:117840451 Cpgi19616 1660 bp proximal
Smg1 within coordinates of
 SNP G/T T T G
rs221779134
MGI SNP Detail		 Chr7:117840452 Cpgi19616 1659 bp proximal
Smg1 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580516662
MGI SNP Detail		 Chr7:117840466 Cpgi19616 1645 bp proximal
Smg1 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242655219
MGI SNP Detail		 Chr7:117840467 Cpgi19616 1644 bp proximal
Smg1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255500673
MGI SNP Detail		 Chr7:117840537 Cpgi19616 1574 bp proximal
Smg1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221012466
MGI SNP Detail		 Chr7:117840550 Cpgi19616 1561 bp proximal
Smg1 within coordinates of
 SNP A/G G A A G G G G G G G A A G G G G G G G G A G A A A G G A G G G A G G G G G G G G A G G G G G G G G G G G G
rs243074756
MGI SNP Detail		 Chr7:117840561 Cpgi19616 1550 bp proximal
Smg1 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31920220
MGI SNP Detail		 Chr7:117840683 Cpgi19616 1428 bp proximal
Smg1 within coordinates of
 SNP A/G A G G A A
rs32066126
MGI SNP Detail		 Chr7:117840713 Cpgi19616 1398 bp proximal
Smg1 within coordinates of
 SNP C/T C T T C
rs240695878
MGI SNP Detail		 Chr7:117840797 Cpgi19616 1314 bp proximal
Smg1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs260095178
MGI SNP Detail		 Chr7:117840811 Cpgi19616 1300 bp proximal
Smg1 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228610683
MGI SNP Detail		 Chr7:117840822 Cpgi19616 1289 bp proximal
Smg1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583976866
MGI SNP Detail		 Chr7:117840911 Cpgi19616 1200 bp proximal
Smg1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260276637
MGI SNP Detail		 Chr7:117840959 Cpgi19616 1152 bp proximal
Smg1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261745833
MGI SNP Detail		 Chr7:117841061 Cpgi19616 1050 bp proximal
Smg1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229707294
MGI SNP Detail		 Chr7:117841119 Cpgi19616 992 bp proximal
Smg1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32112063
MGI SNP Detail		 Chr7:117841174 Cpgi19616 937 bp proximal
Smg1 within coordinates of
 SNP C/T T T C C T
rs214675352
MGI SNP Detail		 Chr7:117841308 Cpgi19616 803 bp proximal
Smg1 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs233093346
MGI SNP Detail		 Chr7:117841419 Cpgi19616 692 bp proximal
Smg1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245812623
MGI SNP Detail		 Chr7:117841761 Cpgi19616 350 bp proximal
Smg1 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216447434
MGI SNP Detail		 Chr7:117842086 Cpgi19616 25 bp proximal
Smg1 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240008358
MGI SNP Detail		 Chr7:117842163 Cpgi19616 within coordinates of
Smg1 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs260639827
MGI SNP Detail		 Chr7:117842217 Cpgi19616 within coordinates of
Smg1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212460885
MGI SNP Detail		 Chr7:117842244 Cpgi19616 within coordinates of
Smg1 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238051885
MGI SNP Detail		 Chr7:117842270 Cpgi19616 within coordinates of
Smg1 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs251983750
MGI SNP Detail		 Chr7:117842655 Cpgi19616 within coordinates of
Smg1 within coordinates of
 SNP A/G A G G G G G G A G G G G G G G A A G A A A G G A G G A G A G G G G G G A G G G G G G G G G G G
rs220951450
MGI SNP Detail		 Chr7:117842793 Cpgi19616 within coordinates of
Smg1 within coordinates of
Tssr74430 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs241146388
MGI SNP Detail		 Chr7:117842939 Cpgi19616 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs253803903
MGI SNP Detail		 Chr7:117843047 Cpgi19616 within coordinates of
Rr400585 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs226370500
MGI SNP Detail		 Chr7:117843060 Cpgi19616 within coordinates of
Rr400585 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A
rs248492649
MGI SNP Detail		 Chr7:117843066 Cpgi19616 within coordinates of
Rr400585 within coordinates of
 SNP A/T T A A T A A T T T A A A A A A A A A A A A A A A A A A A A A A A A A A T T A T A A T T A A A A A A T A
rs264676255
MGI SNP Detail		 Chr7:117843158 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
Rr400585 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228780831
MGI SNP Detail		 Chr7:117843176 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
Rr400585 within coordinates of
 SNP A/G A G G A A A A A A A G A A A A A A A G G G G G G A A G A A G A G A A A A A A G A A A A A A G A A A A
rs238004500
MGI SNP Detail		 Chr7:117843271 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
Rr400585 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256731021
MGI SNP Detail		 Chr7:117843381 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
 SNP C/T C T T C C C C C C C T C C C C C C C C T C T T T C C T C C T C C C C C C C C T C C C C C C C C C C C
rs227115562
MGI SNP Detail		 Chr7:117843430 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
 SNP A/G G A A G G G G G G G A G G G G G G G G A G A A A G G A G G A G G G G G G G G A G G G G G G G G G G G
rs246209563
MGI SNP Detail		 Chr7:117843516 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
 SNP C/G C G G C C C C C C C G G C C C C C C C C G C G G G C C G C C G C C C C C C C C G C C C C C C C C C C C
rs32298206
MGI SNP Detail		 Chr7:117843525 4930583K01Rik within coordinates of
Cpgi19616 within coordinates of
 SNP A/G A G A
rs234738899
MGI SNP Detail		 Chr7:117843876 4930583K01Rik within coordinates of
Cpgi19616 266 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248916331
MGI SNP Detail		 Chr7:117843961 4930583K01Rik within coordinates of
Cpgi19616 351 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212858563
MGI SNP Detail		 Chr7:117844319 4930583K01Rik within coordinates of
Cpgi19616 709 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235875511
MGI SNP Detail		 Chr7:117844329 4930583K01Rik within coordinates of
Cpgi19616 719 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31932333
MGI SNP Detail		 Chr7:117844347 4930583K01Rik within coordinates of
Cpgi19616 737 bp distal
 SNP G/T G T T G
rs215142532
MGI SNP Detail		 Chr7:117844400 4930583K01Rik within coordinates of
Cpgi19616 790 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs234682690
MGI SNP Detail		 Chr7:117844663 4930583K01Rik within coordinates of
Cpgi19616 1053 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31650541
MGI SNP Detail		 Chr7:117844744 4930583K01Rik within coordinates of
Cpgi19616 1134 bp distal
 SNP A/G A G G A
rs226524730
MGI SNP Detail		 Chr7:117844748 4930583K01Rik within coordinates of
Cpgi19616 1138 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251621985
MGI SNP Detail		 Chr7:117844807 Cpgi19616 1197 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255655152
MGI SNP Detail		 Chr7:117844824 Cpgi19616 1214 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32348281
MGI SNP Detail		 Chr7:117844905 Cpgi19616 1295 bp distal
 SNP A/G A G G A
rs237637847
MGI SNP Detail		 Chr7:117844964 Cpgi19616 1354 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256781686
MGI SNP Detail		 Chr7:117845135 Cpgi19616 1525 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227197401
MGI SNP Detail		 Chr7:117845165 Cpgi19616 1555 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32422135
MGI SNP Detail		 Chr7:117845186 Cpgi19616 1576 bp distal
 SNP A/G G G G A G
rs31801656
MGI SNP Detail		 Chr7:117845188 Cpgi19616 1578 bp distal
 SNP A/G G G A A G
rs234089048
MGI SNP Detail		 Chr7:117845201 Cpgi19616 1591 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs252274564
MGI SNP Detail		 Chr7:117845256 Cpgi19616 1646 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581408857
MGI SNP Detail		 Chr7:117845304 Cpgi19616 1694 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212592408
MGI SNP Detail		 Chr7:117845324 Cpgi19616 1714 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229855595
MGI SNP Detail		 Chr7:117845436 Cpgi19616 1826 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245419013
MGI SNP Detail		 Chr7:117845445 Cpgi19616 1835 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32114133
MGI SNP Detail		 Chr7:117845500 Cpgi19616 1890 bp distal
 SNP A/C C C A A C
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory