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Mouse SNP Summary
Symbol
Name
ID
Cpgi19823
CpG island 19823
MGI:5684897

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Showing SNP(s) 1 - 84 of 84

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46817707
MGI SNP Detail
Chr7:131228070 Cpgi19823 1988 bp proximal
SNP C/T T T T T T T C T T T C T T C T
rs48217631
MGI SNP Detail
Chr7:131228134 Cpgi19823 1924 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs50955129
MGI SNP Detail
Chr7:131228154 Cpgi19823 1904 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs222250969
MGI SNP Detail
Chr7:131228164 Cpgi19823 1894 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs48329917
MGI SNP Detail
Chr7:131228173 Cpgi19823 1885 bp proximal
SNP A/C C C C C C C A C C C A C C A C
rs257354018
MGI SNP Detail
Chr7:131228194 Cpgi19823 1864 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50773913
MGI SNP Detail
Chr7:131228210 Cpgi19823 1848 bp proximal
SNP A/G A A A A A A A A A G A A G A
rs246218991
MGI SNP Detail
Chr7:131228215 Cpgi19823 1843 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs262838289
MGI SNP Detail
Chr7:131228227 Cpgi19823 1831 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs51814408
MGI SNP Detail
Chr7:131228322 Cpgi19823 1736 bp proximal
SNP C C
rs249012907
MGI SNP Detail
Chr7:131228330 Cpgi19823 1728 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31991118
MGI SNP Detail
Chr7:131228331 Cpgi19823 1727 bp proximal
SNP G/T T G
rs228545604
MGI SNP Detail
Chr7:131228374 Cpgi19823 1684 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51694660
MGI SNP Detail
Chr7:131228389 Cpgi19823 1669 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs214911770
MGI SNP Detail
Chr7:131228402 Cpgi19823 1656 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46908922
MGI SNP Detail
Chr7:131228417 Cpgi19823 1641 bp proximal
SNP A/T T T T T T T A T T T A T T A T
rs47996867
MGI SNP Detail
Chr7:131228428 Cpgi19823 1630 bp proximal
SNP G/T T T T T T T T T T T G T T G T
rs214463234
MGI SNP Detail
Chr7:131228493 Cpgi19823 1565 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236617136
MGI SNP Detail
Chr7:131228499 Cpgi19823 1559 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256593196
MGI SNP Detail
Chr7:131228515 Cpgi19823 1543 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48976088
MGI SNP Detail
Chr7:131228533 Cpgi19823 1525 bp proximal
SNP C/T T T T T T T C T T T T T T T T
rs241948925
MGI SNP Detail
Chr7:131228548 Cpgi19823 1510 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251563720
MGI SNP Detail
Chr7:131228555 Cpgi19823 1503 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221487837
MGI SNP Detail
Chr7:131228564 Cpgi19823 1494 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243186967
MGI SNP Detail
Chr7:131228613 Cpgi19823 1445 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265338450
MGI SNP Detail
Chr7:131228690 Cpgi19823 1368 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220600268
MGI SNP Detail
Chr7:131228707 Cpgi19823 1351 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245201561
MGI SNP Detail
Chr7:131228748 Cpgi19823 1310 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256693416
MGI SNP Detail
Chr7:131228754 Cpgi19823 1304 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs228469061
MGI SNP Detail
Chr7:131228760 Cpgi19823 1298 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs248786401
MGI SNP Detail
Chr7:131228792 Cpgi19823 1266 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259029050
MGI SNP Detail
Chr7:131228843 Cpgi19823 1215 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50566019
MGI SNP Detail
Chr7:131228882 Cpgi19823 1176 bp proximal
SNP A/G G G G G G G G G G G G A A G G A G
rs250348683
MGI SNP Detail
Chr7:131228885 Cpgi19823 1173 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214733954
MGI SNP Detail
Chr7:131228907 Cpgi19823 1151 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234483079
MGI SNP Detail
Chr7:131228912 Cpgi19823 1146 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253750694
MGI SNP Detail
Chr7:131228914 Cpgi19823 1144 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216962483
MGI SNP Detail
Chr7:131228915 Cpgi19823 1143 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235395195
MGI SNP Detail
Chr7:131228949 Cpgi19823 1109 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251574119
MGI SNP Detail
Chr7:131229017 Cpgi19823 1041 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51199693
MGI SNP Detail
Chr7:131229020 Cpgi19823 1038 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs50357388
MGI SNP Detail
Chr7:131229028 Cpgi19823 1030 bp proximal
SNP A/G A A A A A A A A A A G G A A G A
rs49373022
MGI SNP Detail
Chr7:131229050 Cpgi19823 1008 bp proximal
SNP A/G A A A A A A A G A A A G G A A G A
rs45965287
MGI SNP Detail
Chr7:131229084 Cpgi19823 974 bp proximal
SNP C/G G G G G G G G C G G G C C G G C G
rs242433649
MGI SNP Detail
Chr7:131229085 Cpgi19823 973 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46793413
MGI SNP Detail
Chr7:131229097 Cpgi19823 961 bp proximal
SNP G/T T T T T T T G T T T T T T T T
rs47545672
MGI SNP Detail
Chr7:131229180 Cpgi19823 878 bp proximal
SNP C/T C C T
rs49392212
MGI SNP Detail
Chr7:131229222 Cpgi19823 836 bp proximal
SNP A/C A A C
rs51810887
MGI SNP Detail
Chr7:131229227 Cpgi19823 831 bp proximal
SNP C/T T T C
rs47550616
MGI SNP Detail
Chr7:131229559 Cpgi19823 499 bp proximal
SNP A/G G G G G G G G G G G G G G G A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47763963
MGI SNP Detail
Chr7:131229594 Cpgi19823 464 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs232375665
MGI SNP Detail
Chr7:131229919 Cpgi19823 139 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46137259
MGI SNP Detail
Chr7:131230066 Cpgi19823 within coordinates of
Rr656477 within coordinates of
SNP A/G G G G G G G G G G G A G G A G
rs49367654
MGI SNP Detail
Chr7:131230107 Cpgi19823 within coordinates of
Rr656477 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs31889964
MGI SNP Detail
Chr7:131230126 Cpgi19823 within coordinates of
Rr656477 within coordinates of
SNP C/G G G C G G G G G G G G G G G G G G
rs242862324
MGI SNP Detail
Chr7:131230157 Cpgi19823 within coordinates of
Rr656477 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216425029
MGI SNP Detail
Chr7:131230215 Cpgi19823 within coordinates of
Rr656477 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46963509
MGI SNP Detail
Chr7:131230872 Cpgi19823 621 bp distal
Rr656477 within coordinates of
SNP C/T C C C C C C C C C C T C C T C
rs31801394
MGI SNP Detail
Chr7:131230890 Cpgi19823 639 bp distal
Rr656477 within coordinates of
SNP A/G G G A A G A A G A A G A A G
rs217463015
MGI SNP Detail
Chr7:131230911 Cpgi19823 660 bp distal
Rr656477 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236594103
MGI SNP Detail
Chr7:131230935 Cpgi19823 684 bp distal
Rr656477 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262654973
MGI SNP Detail
Chr7:131230943 Cpgi19823 692 bp distal
Rr656477 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220561972
MGI SNP Detail
Chr7:131230953 Cpgi19823 702 bp distal
Rr656477 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237318293
MGI SNP Detail
Chr7:131230954 Cpgi19823 703 bp distal
Rr656477 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47515943
MGI SNP Detail
Chr7:131231012 Cpgi19823 761 bp distal
Rr656477 within coordinates of
SNP A/G G G G G G G G G G G A G G A G
rs50522358
MGI SNP Detail
Chr7:131231109 Cpgi19823 858 bp distal
Rr656477 within coordinates of
SNP G/T G G G G G G T G G G T G G T G
rs240673402
MGI SNP Detail
Chr7:131231132 Cpgi19823 881 bp distal
Rr656477 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252730063
MGI SNP Detail
Chr7:131231188 Cpgi19823 937 bp distal
Rr656477 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225032706
MGI SNP Detail
Chr7:131231213 Cpgi19823 962 bp distal
Rr656477 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs243169070
MGI SNP Detail
Chr7:131231323 Cpgi19823 1072 bp distal
Rr656477 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48439319
MGI SNP Detail
Chr7:131231738 Cpgi19823 1487 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs47257118
MGI SNP Detail
Chr7:131231753 Cpgi19823 1502 bp distal
SNP C/T T T T T T T C T T T T T T T T
rs236319243
MGI SNP Detail
Chr7:131231795 Cpgi19823 1544 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583001547
MGI SNP Detail
Chr7:131231859 Cpgi19823 1608 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258747375
MGI SNP Detail
Chr7:131231922 Cpgi19823 1671 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229055859
MGI SNP Detail
Chr7:131231956 Cpgi19823 1705 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs245051636
MGI SNP Detail
Chr7:131231980 Cpgi19823 1729 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs217160979
MGI SNP Detail
Chr7:131232032 Cpgi19823 1781 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230534024
MGI SNP Detail
Chr7:131232036 Cpgi19823 1785 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251881721
MGI SNP Detail
Chr7:131232133 Cpgi19823 1882 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs212678860
MGI SNP Detail
Chr7:131232175 Cpgi19823 1924 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230751139
MGI SNP Detail
Chr7:131232185 Cpgi19823 1934 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45883785
MGI SNP Detail
Chr7:131232204 Cpgi19823 1953 bp distal
SNP A/T A A A A A A T A A A T A A T A
rs46030907
MGI SNP Detail
Chr7:131232245 Cpgi19823 1994 bp distal
SNP A/G A A A A A A G A A A G A A G A
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Showing SNP(s) 1 - 84 of 84

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory