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Mouse SNP Summary
Symbol
Name
ID 		Cpgi20683
CpG island 20683
MGI:5685757

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229884780
MGI SNP Detail		 Chr8:84924996 Cpgi20682 within coordinates of
Cpgi20683 1775 bp proximal
Gm26887 within coordinates of
Gm56830 within coordinates of
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50760771
MGI SNP Detail		 Chr8:84925090 Cpgi20682 within coordinates of
Cpgi20683 1681 bp proximal
Gm26887 within coordinates of
Gm56830 within coordinates of
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP G G
rs251439795
MGI SNP Detail		 Chr8:84925295 Cpgi20682 within coordinates of
Cpgi20683 1476 bp proximal
Gm26887 within coordinates of
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32554302
MGI SNP Detail		 Chr8:84925378 Cpgi20682 within coordinates of
Cpgi20683 1393 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP A/G A A G A G
rs228764469
MGI SNP Detail		 Chr8:84925503 Cpgi20683 1268 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33413400
MGI SNP Detail		 Chr8:84925552 Cpgi20683 1219 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP G/T G G T G G T
rs217283696
MGI SNP Detail		 Chr8:84925581 Cpgi20683 1190 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32994546
MGI SNP Detail		 Chr8:84925615 Cpgi20683 1156 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP C/T T T C T T C
rs251966516
MGI SNP Detail		 Chr8:84925623 Cpgi20683 1148 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32657538
MGI SNP Detail		 Chr8:84925664 Cpgi20683 1107 bp proximal
Gm56836 within coordinates of
Rr186982 within coordinates of
 SNP A/G A A G A A G
rs239172817
MGI SNP Detail		 Chr8:84925862 Cpgi20683 909 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33207359
MGI SNP Detail		 Chr8:84925865 Cpgi20683 906 bp proximal
 SNP A/G G G A G G A
rs221384038
MGI SNP Detail		 Chr8:84926107 Cpgi20683 664 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3700582
MGI SNP Detail		 Chr8:84926151 Cpgi20683 620 bp proximal
 SNP C/G C G
rs255640744
MGI SNP Detail		 Chr8:84926171 Cpgi20683 600 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221331805
MGI SNP Detail		 Chr8:84926400 Cpgi20683 371 bp proximal
Rr186983 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240203601
MGI SNP Detail		 Chr8:84926474 Cpgi20683 297 bp proximal
Rr186983 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259591259
MGI SNP Detail		 Chr8:84926530 Cpgi20683 241 bp proximal
Rr186983 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33364609
MGI SNP Detail		 Chr8:84926688 Cpgi20683 83 bp proximal
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/G A G A A G
rs33021197
MGI SNP Detail		 Chr8:84926703 Cpgi20683 68 bp proximal
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/G G A G G A
rs33570559
MGI SNP Detail		 Chr8:84926842 Cpgi20683 within coordinates of
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/G A G A A G
rs229108893
MGI SNP Detail		 Chr8:84927021 Cpgi20683 within coordinates of
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246549441
MGI SNP Detail		 Chr8:84927109 Cpgi20683 within coordinates of
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs256056325
MGI SNP Detail		 Chr8:84927189 Cpgi20683 within coordinates of
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/G G A
rs226821239
MGI SNP Detail		 Chr8:84927204 Cpgi20683 within coordinates of
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32975009
MGI SNP Detail		 Chr8:84927222 Cpgi20683 within coordinates of
Gm64014 within coordinates of
Rr186983 within coordinates of
 SNP A/T T A
rs237202282
MGI SNP Detail		 Chr8:84927528 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Rr186983 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs252995945
MGI SNP Detail		 Chr8:84927852 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Gm64130 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212968682
MGI SNP Detail		 Chr8:84927989 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Gm64130 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235835320
MGI SNP Detail		 Chr8:84928074 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Gm64130 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255481318
MGI SNP Detail		 Chr8:84928228 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Gm64130 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33615186
MGI SNP Detail		 Chr8:84928324 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/G A A G A A G
rs32692557
MGI SNP Detail		 Chr8:84928391 Cpgi20683 within coordinates of
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/T A A T A A T
rs259128301
MGI SNP Detail		 Chr8:84928595 Cpgi20683 112 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
Tssr82085 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221669095
MGI SNP Detail		 Chr8:84928616 Cpgi20683 133 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
Tssr82086 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243703447
MGI SNP Detail		 Chr8:84928663 Cpgi20683 180 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/G G G G A G A G G G A A A A A A A A A G A A A A A A A A A G A G A A G G A A A G A G G G A G G A G G G G A
rs264555492
MGI SNP Detail		 Chr8:84928728 Cpgi20683 245 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T A T T T T
rs218425359
MGI SNP Detail		 Chr8:84928756 Cpgi20683 273 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP G/T T T T G T G T T T G G G G G G G G G T G G G G G G G G G T T G T G G T T G G G T G G G T G T T G G T G T G
rs240761167
MGI SNP Detail		 Chr8:84928791 Cpgi20683 308 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259723621
MGI SNP Detail		 Chr8:84928812 Cpgi20683 329 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226851269
MGI SNP Detail		 Chr8:84929026 Cpgi20683 543 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs245937237
MGI SNP Detail		 Chr8:84929054 Cpgi20683 571 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262339722
MGI SNP Detail		 Chr8:84929292 Cpgi20683 809 bp distal
Gm37352 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231280114
MGI SNP Detail		 Chr8:84929459 Cpgi20683 976 bp distal
Gm37352 within coordinates of
Gm56841 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249158352
MGI SNP Detail		 Chr8:84929714 Cpgi20683 1231 bp distal
Gm56841 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213470808
MGI SNP Detail		 Chr8:84929760 Cpgi20683 1277 bp distal
Gm56841 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235689333
MGI SNP Detail		 Chr8:84929811 Cpgi20683 1328 bp distal
Gm56841 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249094764
MGI SNP Detail		 Chr8:84929868 Cpgi20683 1385 bp distal
Gm56841 within coordinates of
Gm65345 within coordinates of
Rr186983 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215432546
MGI SNP Detail		 Chr8:84929974 Cpgi20683 1491 bp distal
Gm56841 within coordinates of
Rr186983 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235202029
MGI SNP Detail		 Chr8:84930048 Cpgi20683 1565 bp distal
Gm56841 within coordinates of
Rr186983 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262224836
MGI SNP Detail		 Chr8:84930070 Cpgi20683 1587 bp distal
Cpgi20684 within coordinates of
Gm56841 within coordinates of
Rr186983 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223798628
MGI SNP Detail		 Chr8:84930322 Cpgi20683 1839 bp distal
Cpgi20684 within coordinates of
Gm56841 within coordinates of
Rr186983 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32732960
MGI SNP Detail		 Chr8:84930437 Cpgi20683 1954 bp distal
Cpgi20684 within coordinates of
Gm56841 within coordinates of
Rr186983 within coordinates of
 SNP C/T T T C T T C C C C T C T
rs32887551
MGI SNP Detail		 Chr8:84930477 Cpgi20683 1994 bp distal
Gm56841 within coordinates of
Rr186983 within coordinates of
 SNP A/G G G A G G A
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Showing SNP(s) 1 - 54 of 54
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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