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Mouse SNP Summary
Symbol
Name
ID 		Cpgi21325
CpG island 21325
MGI:5686399

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Showing SNP(s) 1 - 29 of 29

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CE/J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LG/J
LP/J
MA/MyJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30696581
MGI SNP Detail		 Chr9:3027399 Cpgi21325 1988 bp proximal
Rr673608 within coordinates of
Tssr88021 within coordinates of
 SNP G/T G T
rs30776553
MGI SNP Detail		 Chr9:3027403 Cpgi21325 1984 bp proximal
Rr673608 within coordinates of
Tssr88021 within coordinates of
 SNP G/T T G G
rs33900545
MGI SNP Detail		 Chr9:3027478 Cpgi21325 1909 bp proximal
Rr673608 within coordinates of
Tssr88022 within coordinates of
 SNP A/T T A A
rs33864250
MGI SNP Detail		 Chr9:3027499 Cpgi21325 1888 bp proximal
Rr673608 within coordinates of
 SNP A/C A C
rs30570157
MGI SNP Detail		 Chr9:3027523 Cpgi21325 1864 bp proximal
Rr673608 within coordinates of
 SNP A/T A T T A
rs33866315
MGI SNP Detail		 Chr9:3027533 Cpgi21325 1854 bp proximal
Rr673608 within coordinates of
 SNP G/T G T
rs30917213
MGI SNP Detail		 Chr9:3027547 Cpgi21325 1840 bp proximal
Rr673608 within coordinates of
 SNP A/G A G
rs31016480
MGI SNP Detail		 Chr9:3027591 Cpgi21325 1796 bp proximal
Rr673608 within coordinates of
 SNP A/C A C
rs30572131
MGI SNP Detail		 Chr9:3027593 Cpgi21325 1794 bp proximal
Rr673608 within coordinates of
 SNP A/T T T A
rs30526723
MGI SNP Detail		 Chr9:3027647 Cpgi21325 1740 bp proximal
Rr673608 within coordinates of
 SNP A/C C A
rs31021608
MGI SNP Detail		 Chr9:3027662 Cpgi21325 1725 bp proximal
 SNP A/T T A
rs33900630
MGI SNP Detail		 Chr9:3027666 Cpgi21325 1721 bp proximal
 SNP A/T T A
rs33898982
MGI SNP Detail		 Chr9:3027673 Cpgi21325 1714 bp proximal
 SNP C/T T C
rs30623758
MGI SNP Detail		 Chr9:3027942 Cpgi21325 1445 bp proximal
Rr673609 within coordinates of
 SNP A/T T A
rs30569859
MGI SNP Detail		 Chr9:3028008 Cpgi21325 1379 bp proximal
Rr673609 within coordinates of
 SNP A/T A T
rs587351329
MGI SNP Detail		 Chr9:3028022 Cpgi21325 1365 bp proximal
Rr673609 within coordinates of
 SNP T T T T
rs30671798
MGI SNP Detail		 Chr9:3028061 Cpgi21325 1326 bp proximal
Rr673609 within coordinates of
 SNP A/T A A T
rs30609551
MGI SNP Detail		 Chr9:3028076 Cpgi21325 1311 bp proximal
Rr673609 within coordinates of
 SNP G/T G T G
rs30673013
MGI SNP Detail		 Chr9:3028094 Cpgi21325 1293 bp proximal
Rr673609 within coordinates of
 SNP A/C/G G G C C
rs30619721
MGI SNP Detail		 Chr9:3028111 Cpgi21325 1276 bp proximal
Rr673609 within coordinates of
 SNP A/T A T
rs580975060
MGI SNP Detail		 Chr9:3028308 Cpgi21325 1079 bp proximal
Rr673609 within coordinates of
 SNP A A A A A A A
rs259504166
MGI SNP Detail		 Chr9:3030125 Cpgi21325 415 bp distal
 SNP T T T
rs585297100
MGI SNP Detail		 Chr9:3030144 Cpgi21325 434 bp distal
 SNP C C C
rs580179826
MGI SNP Detail		 Chr9:3030399 Cpgi21325 689 bp distal
Rr673611 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233798233
MGI SNP Detail		 Chr9:3030400 Cpgi21325 690 bp distal
Rr673611 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CE/J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LG/J
LP/J
MA/MyJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30903283
MGI SNP Detail		 Chr9:3030708 Cpgi21325 998 bp distal
Rr673611 within coordinates of
 SNP A/T T T A
rs264942752
MGI SNP Detail		 Chr9:3031139 Cpgi21325 1429 bp distal
Rr673611 within coordinates of
 SNP C/T T C
rs227988105
MGI SNP Detail		 Chr9:3031145 Cpgi21325 1435 bp distal
Rr673611 within coordinates of
 SNP C/G C C C G G
rs30720468
MGI SNP Detail		 Chr9:3031703 Cpgi21325 1993 bp distal
Rr673611 within coordinates of
 SNP C/T T C
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Showing SNP(s) 1 - 29 of 29
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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