About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Cpgi21464
CpG island 21464
MGI:5686536

<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232223352
MGI SNP Detail		 Chr9:21869756 Cpgi21464 1981 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs583199589
MGI SNP Detail		 Chr9:21869800 Cpgi21464 1937 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs8270110
MGI SNP Detail		 Chr9:21869831 Cpgi21464 1906 bp proximal
 SNP A/G A A A A A A A G A A A A A A A A A A A
rs214326861
MGI SNP Detail		 Chr9:21870030 Cpgi21464 1707 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224165203
MGI SNP Detail		 Chr9:21870041 Cpgi21464 1696 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45719424
MGI SNP Detail		 Chr9:21870105 Cpgi21464 1632 bp proximal
 SNP C/G C C C C C C C C C C G C C G C
rs218073873
MGI SNP Detail		 Chr9:21870168 Cpgi21464 1569 bp proximal
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580698099
MGI SNP Detail		 Chr9:21870249 Cpgi21464 1488 bp proximal
Epor within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs49137938
MGI SNP Detail		 Chr9:21870277 Cpgi21464 1460 bp proximal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C T C
rs46913239
MGI SNP Detail		 Chr9:21870294 Cpgi21464 1443 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs217386217
MGI SNP Detail		 Chr9:21870375 Cpgi21464 1362 bp proximal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231608323
MGI SNP Detail		 Chr9:21870472 Cpgi21464 1265 bp proximal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250739242
MGI SNP Detail		 Chr9:21870553 Cpgi21464 1184 bp proximal
Epor within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs46633627
MGI SNP Detail		 Chr9:21870589 Cpgi21464 1148 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs237059632
MGI SNP Detail		 Chr9:21870759 Cpgi21464 978 bp proximal
Epor within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs8270114
MGI SNP Detail		 Chr9:21870859 Cpgi21464 878 bp proximal
Epor within coordinates of
 SNP G/T G G G G T T
rs225384451
MGI SNP Detail		 Chr9:21870869 Cpgi21464 868 bp proximal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8270113
MGI SNP Detail		 Chr9:21870907 Cpgi21464 830 bp proximal
Epor within coordinates of
 SNP A/G G G G G A G G G G A G G A A A A A A
rs263034933
MGI SNP Detail		 Chr9:21870919 Cpgi21464 818 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs8270112
MGI SNP Detail		 Chr9:21871015 Cpgi21464 722 bp proximal
Epor within coordinates of
 SNP C/T T T T T T C T T T T C T T T C C C C T C
rs238654541
MGI SNP Detail		 Chr9:21871081 Cpgi21464 656 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258202965
MGI SNP Detail		 Chr9:21871223 Cpgi21464 514 bp proximal
Epor within coordinates of
 SNP A/T A A A A A A A A T A A A A A A A A A T A A A A A A T A A A A T T A T A T A T A A A A T T A A A A A T T A
rs8270111
MGI SNP Detail		 Chr9:21871249 Cpgi21464 488 bp proximal
Epor within coordinates of
 SNP A/G A A A A A A A G G
rs244223535
MGI SNP Detail		 Chr9:21871264 Cpgi21464 473 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs265918259
MGI SNP Detail		 Chr9:21871268 Cpgi21464 469 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233899707
MGI SNP Detail		 Chr9:21871302 Cpgi21464 435 bp proximal
Epor within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs8236772
MGI SNP Detail		 Chr9:21871322 Cpgi21464 415 bp proximal
Epor within coordinates of
 SNP A/T T T T T T T T T T T A T T T T T T T T T T T
rs216845186
MGI SNP Detail		 Chr9:21871380 Cpgi21464 357 bp proximal
Epor within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A T T T T T T A T T T T T T T A T T T A
rs8236773
MGI SNP Detail		 Chr9:21871511 Cpgi21464 226 bp proximal
Epor within coordinates of
 SNP C/T C C C C C C C C C C T C C C T C C C C C T C
rs244741743
MGI SNP Detail		 Chr9:21871523 Cpgi21464 214 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212326091
MGI SNP Detail		 Chr9:21871641 Cpgi21464 96 bp proximal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230966098
MGI SNP Detail		 Chr9:21871677 Cpgi21464 60 bp proximal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260528520
MGI SNP Detail		 Chr9:21871801 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs8270115
MGI SNP Detail		 Chr9:21871857 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP C/T C C C C C T C C C C T C C C T T T T C T
rs238299333
MGI SNP Detail		 Chr9:21871976 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs262706286
MGI SNP Detail		 Chr9:21872068 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs8236774
MGI SNP Detail		 Chr9:21872191 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP A/G G G G G G G G G A G G G G
rs8270126
MGI SNP Detail		 Chr9:21872199 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP A/G G G G G G G G A A
rs581887186
MGI SNP Detail		 Chr9:21872206 Cpgi21464 within coordinates of
Epor within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258140796
MGI SNP Detail		 Chr9:21872257 Cpgi21464 51 bp distal
Epor within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217995737
MGI SNP Detail		 Chr9:21872270 Cpgi21464 64 bp distal
Epor within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244891504
MGI SNP Detail		 Chr9:21872328 Cpgi21464 122 bp distal
Epor within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8236775
MGI SNP Detail		 Chr9:21872336 Cpgi21464 130 bp distal
Epor within coordinates of
 SNP A/C C C C C C C C A C C A C A C A C A A A A A A
rs234954573
MGI SNP Detail		 Chr9:21872380 Cpgi21464 174 bp distal
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45714559
MGI SNP Detail		 Chr9:21872431 Cpgi21464 225 bp distal
Epor within coordinates of
 SNP C/G C C C C C C C C C C G C C G C
rs258165727
MGI SNP Detail		 Chr9:21872553 Cpgi21464 347 bp distal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225395962
MGI SNP Detail		 Chr9:21872560 Cpgi21464 354 bp distal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244671395
MGI SNP Detail		 Chr9:21872594 Cpgi21464 388 bp distal
Epor within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212269049
MGI SNP Detail		 Chr9:21872618 Cpgi21464 412 bp distal
Epor within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230913006
MGI SNP Detail		 Chr9:21872619 Cpgi21464 413 bp distal
Epor within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259502155
MGI SNP Detail		 Chr9:21872694 Cpgi21464 488 bp distal
Epor within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219654422
MGI SNP Detail		 Chr9:21872735 Cpgi21464 529 bp distal
Epor within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240422288
MGI SNP Detail		 Chr9:21872737 Cpgi21464 531 bp distal
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs259856886
MGI SNP Detail		 Chr9:21872756 Cpgi21464 550 bp distal
Epor within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221461596
MGI SNP Detail		 Chr9:21872774 Cpgi21464 568 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231268546
MGI SNP Detail		 Chr9:21872904 Cpgi21464 698 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251736295
MGI SNP Detail		 Chr9:21873072 Cpgi21464 866 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217943295
MGI SNP Detail		 Chr9:21873140 Cpgi21464 934 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241982619
MGI SNP Detail		 Chr9:21873211 Cpgi21464 1005 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265885219
MGI SNP Detail		 Chr9:21873223 Cpgi21464 1017 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs226600783
MGI SNP Detail		 Chr9:21873246 Cpgi21464 1040 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8270072
MGI SNP Detail		 Chr9:21873274 Cpgi21464 1068 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP G/T G G G G G G G G T G G G G G G G G G G G
rs258095793
MGI SNP Detail		 Chr9:21873287 Cpgi21464 1081 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225329270
MGI SNP Detail		 Chr9:21873288 Cpgi21464 1082 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238434990
MGI SNP Detail		 Chr9:21873356 Cpgi21464 1150 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254005346
MGI SNP Detail		 Chr9:21873407 Cpgi21464 1201 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229425230
MGI SNP Detail		 Chr9:21873459 Cpgi21464 1253 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs8270073
MGI SNP Detail		 Chr9:21873465 Cpgi21464 1259 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/C A A A A A A A C C
rs8236776
MGI SNP Detail		 Chr9:21873595 Cpgi21464 1389 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/G G G G G G G G G G G A G G G G G G G G G G G
rs50774224
MGI SNP Detail		 Chr9:21873713 Cpgi21464 1507 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs258667956
MGI SNP Detail		 Chr9:21873788 Cpgi21464 1582 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214003558
MGI SNP Detail		 Chr9:21874048 Cpgi21464 1842 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/T A A A A A A A A T A A A A A A A A A T T A A T A A T A T A T A T T T T A T A T A T A A T T A A T A T T T
rs233380618
MGI SNP Detail		 Chr9:21874071 Cpgi21464 1865 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251658995
MGI SNP Detail		 Chr9:21874092 Cpgi21464 1886 bp distal
Cpgi21465 within coordinates of
Epor within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...