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Mouse SNP Summary
Symbol
Name
ID 		Cpgi21598
CpG island 21598
MGI:5686670

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29589621
MGI SNP Detail		 Chr9:40640046 Clmp within coordinates of
Cpgi21598 1966 bp proximal
Gm68229 within coordinates of
 SNP C/G G G G C G G G
rs215584767
MGI SNP Detail		 Chr9:40640057 Clmp within coordinates of
Cpgi21598 1955 bp proximal
Gm68229 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239064846
MGI SNP Detail		 Chr9:40640059 Clmp within coordinates of
Cpgi21598 1953 bp proximal
Gm68229 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263953460
MGI SNP Detail		 Chr9:40640147 Clmp within coordinates of
Cpgi21598 1865 bp proximal
Gm68229 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs226803856
MGI SNP Detail		 Chr9:40640263 Clmp within coordinates of
Cpgi21598 1749 bp proximal
Gm68229 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs38436919
MGI SNP Detail		 Chr9:40640275 Clmp within coordinates of
Cpgi21598 1737 bp proximal
Gm68229 within coordinates of
 SNP A/G A A A A A A A G A A A A G A A G A G
rs250639000
MGI SNP Detail		 Chr9:40640417 Clmp within coordinates of
Cpgi21598 1595 bp proximal
Gm68229 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs219701564
MGI SNP Detail		 Chr9:40640468 Clmp within coordinates of
Cpgi21598 1544 bp proximal
Gm68229 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs238775097
MGI SNP Detail		 Chr9:40640470 Clmp within coordinates of
Cpgi21598 1542 bp proximal
Gm68229 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs258217075
MGI SNP Detail		 Chr9:40640471 Clmp within coordinates of
Cpgi21598 1541 bp proximal
Gm68229 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs223985453
MGI SNP Detail		 Chr9:40640514 Clmp within coordinates of
Cpgi21598 1498 bp proximal
Gm68229 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs50777254
MGI SNP Detail		 Chr9:40640560 Clmp within coordinates of
Cpgi21598 1452 bp proximal
Gm68229 within coordinates of
 SNP G G G G G
rs45758355
MGI SNP Detail		 Chr9:40640572 Clmp within coordinates of
Cpgi21598 1440 bp proximal
Gm68229 within coordinates of
 SNP C C C C C
rs51433706
MGI SNP Detail		 Chr9:40640659 Clmp within coordinates of
Cpgi21598 1353 bp proximal
Gm68229 within coordinates of
 SNP A/G A A G A
rs241988387
MGI SNP Detail		 Chr9:40640689 Clmp within coordinates of
Cpgi21598 1323 bp proximal
Gm68229 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36703596
MGI SNP Detail		 Chr9:40640745 Clmp within coordinates of
Cpgi21598 1267 bp proximal
Gm68229 within coordinates of
 SNP C/T T T T T T T T C T T T T C T T C T
rs49280676
MGI SNP Detail		 Chr9:40640819 Clmp within coordinates of
Cpgi21598 1193 bp proximal
Gm68229 within coordinates of
 SNP G G G G G
rs244323353
MGI SNP Detail		 Chr9:40640838 Clmp within coordinates of
Cpgi21598 1174 bp proximal
Gm68229 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs50031374
MGI SNP Detail		 Chr9:40640900 Clmp within coordinates of
Cpgi21598 1112 bp proximal
Gm68229 within coordinates of
 SNP G G G G G
rs49517911
MGI SNP Detail		 Chr9:40640921 Clmp within coordinates of
Cpgi21598 1091 bp proximal
Gm68229 within coordinates of
 SNP G G G G G
rs254299608
MGI SNP Detail		 Chr9:40641005 Clmp within coordinates of
Cpgi21598 1007 bp proximal
Gm68229 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219546621
MGI SNP Detail		 Chr9:40641149 Clmp within coordinates of
Cpgi21598 863 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs229977548
MGI SNP Detail		 Chr9:40641153 Clmp within coordinates of
Cpgi21598 859 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs38084665
MGI SNP Detail		 Chr9:40641278 Clmp within coordinates of
Cpgi21598 734 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP C/G C C C C C C G C C C C G C G C G
rs49678349
MGI SNP Detail		 Chr9:40641295 Clmp within coordinates of
Cpgi21598 717 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46624566
MGI SNP Detail		 Chr9:40641298 Clmp within coordinates of
Cpgi21598 714 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A A
rs586102296
MGI SNP Detail		 Chr9:40641358 Clmp within coordinates of
Cpgi21598 654 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs213864666
MGI SNP Detail		 Chr9:40641425 Clmp within coordinates of
Cpgi21598 587 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs579989510
MGI SNP Detail		 Chr9:40641433 Clmp within coordinates of
Cpgi21598 579 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs584155604
MGI SNP Detail		 Chr9:40641434 Clmp within coordinates of
Cpgi21598 578 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs233073411
MGI SNP Detail		 Chr9:40641557 Clmp within coordinates of
Cpgi21598 455 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587518085
MGI SNP Detail		 Chr9:40641564 Clmp within coordinates of
Cpgi21598 448 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252985293
MGI SNP Detail		 Chr9:40641571 Clmp within coordinates of
Cpgi21598 441 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580912756
MGI SNP Detail		 Chr9:40641587 Clmp within coordinates of
Cpgi21598 425 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs52564276
MGI SNP Detail		 Chr9:40641672 Clmp within coordinates of
Cpgi21598 340 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/C A A C A
rs248757832
MGI SNP Detail		 Chr9:40641711 Clmp within coordinates of
Cpgi21598 301 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36899338
MGI SNP Detail		 Chr9:40641719 Clmp within coordinates of
Cpgi21598 293 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP C/T C C C C C C T C C C C T C C T C
rs227105690
MGI SNP Detail		 Chr9:40641728 Clmp within coordinates of
Cpgi21598 284 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235635753
MGI SNP Detail		 Chr9:40641741 Clmp within coordinates of
Cpgi21598 271 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs49286376
MGI SNP Detail		 Chr9:40641770 Clmp within coordinates of
Cpgi21598 242 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP T T T T T
rs224880351
MGI SNP Detail		 Chr9:40641786 Clmp within coordinates of
Cpgi21598 226 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238175580
MGI SNP Detail		 Chr9:40641830 Clmp within coordinates of
Cpgi21598 182 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs50373866
MGI SNP Detail		 Chr9:40641833 Clmp within coordinates of
Cpgi21598 179 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A A A A A
rs232657288
MGI SNP Detail		 Chr9:40641948 Clmp within coordinates of
Cpgi21598 64 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs254817140
MGI SNP Detail		 Chr9:40641984 Clmp within coordinates of
Cpgi21598 28 bp proximal
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A A A
rs219817465
MGI SNP Detail		 Chr9:40642062 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224570837
MGI SNP Detail		 Chr9:40642083 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244582438
MGI SNP Detail		 Chr9:40642114 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs29695102
MGI SNP Detail		 Chr9:40642162 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A/G G A G G G
rs232890158
MGI SNP Detail		 Chr9:40642187 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258837955
MGI SNP Detail		 Chr9:40642189 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs29736226
MGI SNP Detail		 Chr9:40642234 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Rr1916 within coordinates of
Rr676903 within coordinates of
 SNP A/G A G A A G
rs38273883
MGI SNP Detail		 Chr9:40642341 Clmp within coordinates of
Cpgi21598 within coordinates of
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP C/T T T T T T T C T T T C T T T T
rs36411701
MGI SNP Detail		 Chr9:40642450 Clmp within coordinates of
Cpgi21598 49 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP C/T C C C C C C T C C C T C C
rs226504551
MGI SNP Detail		 Chr9:40642484 Clmp within coordinates of
Cpgi21598 83 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs235839689
MGI SNP Detail		 Chr9:40642495 Clmp within coordinates of
Cpgi21598 94 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs37023168
MGI SNP Detail		 Chr9:40642535 Clmp within coordinates of
Cpgi21598 134 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP G/T T T T T T T T T T T T T T G T
rs219111226
MGI SNP Detail		 Chr9:40642655 Clmp within coordinates of
Cpgi21598 254 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs29839704
MGI SNP Detail		 Chr9:40642738 Clmp within coordinates of
Cpgi21598 337 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP A/T A A T A A A
rs30471181
MGI SNP Detail		 Chr9:40642781 Clmp within coordinates of
Cpgi21598 380 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP A/T A A T A A
rs232799020
MGI SNP Detail		 Chr9:40642800 Clmp within coordinates of
Cpgi21598 399 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247872523
MGI SNP Detail		 Chr9:40642809 Clmp within coordinates of
Cpgi21598 408 bp distal
Gm68229 within coordinates of
Gm68234 within coordinates of
Rr1916 within coordinates of
Rr676904 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266216739
MGI SNP Detail		 Chr9:40643043 Clmp within coordinates of
Cpgi21598 642 bp distal
Rr1916 within coordinates of
Rr676905 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs583136923
MGI SNP Detail		 Chr9:40643081 Clmp within coordinates of
Cpgi21598 680 bp distal
Rr1916 within coordinates of
Rr676905 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs586147603
MGI SNP Detail		 Chr9:40643091 Clmp within coordinates of
Cpgi21598 690 bp distal
Rr1916 within coordinates of
Rr676905 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs257888171
MGI SNP Detail		 Chr9:40643129 Clmp within coordinates of
Cpgi21598 728 bp distal
Rr1916 within coordinates of
Rr676905 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs226657325
MGI SNP Detail		 Chr9:40643135 Clmp within coordinates of
Cpgi21598 734 bp distal
Rr1916 within coordinates of
Rr676905 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs257324802
MGI SNP Detail		 Chr9:40643233 Clmp within coordinates of
Cpgi21598 832 bp distal
Rr1916 within coordinates of
Rr676905 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49546128
MGI SNP Detail		 Chr9:40643270 Clmp within coordinates of
Cpgi21598 869 bp distal
Rr1916 within coordinates of
 SNP A A A A A A
rs242313399
MGI SNP Detail		 Chr9:40643299 Clmp within coordinates of
Cpgi21598 898 bp distal
Rr1916 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs52345311
MGI SNP Detail		 Chr9:40643300 Clmp within coordinates of
Cpgi21598 899 bp distal
Rr1916 within coordinates of
 SNP A A A A A A
rs387158623
MGI SNP Detail		 Chr9:40643324 Clmp within coordinates of
Cpgi21598 923 bp distal
Rr1916 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G T T G G G T G G T T G G G G G G
rs217245404
MGI SNP Detail		 Chr9:40643397 Clmp within coordinates of
Cpgi21598 996 bp distal
Rr1916 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs52258143
MGI SNP Detail		 Chr9:40643400 Clmp within coordinates of
Cpgi21598 999 bp distal
Rr1916 within coordinates of
 SNP A/G G A G
rs248917059
MGI SNP Detail		 Chr9:40643405 Clmp within coordinates of
Cpgi21598 1004 bp distal
Rr1916 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C A A C C C A C A A C A A C C C C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30419679
MGI SNP Detail		 Chr9:40643449 Clmp within coordinates of
Cpgi21598 1048 bp distal
Rr1916 within coordinates of
 SNP A/G A G A A A
rs33653729
MGI SNP Detail		 Chr9:40643496 Clmp within coordinates of
Cpgi21598 1095 bp distal
Rr1916 within coordinates of
 SNP A/G G A A A
rs46144020
MGI SNP Detail		 Chr9:40643533 Clmp within coordinates of
Cpgi21598 1132 bp distal
Rr1916 within coordinates of
 SNP T T T T
rs49795296
MGI SNP Detail		 Chr9:40643647 Clmp within coordinates of
Cpgi21598 1246 bp distal
Rr1916 within coordinates of
 SNP C C C C C C
rs50042263
MGI SNP Detail		 Chr9:40643707 Clmp within coordinates of
Cpgi21598 1306 bp distal
Rr676906 within coordinates of
 SNP T T T
rs249873421
MGI SNP Detail		 Chr9:40643798 Clmp within coordinates of
Cpgi21598 1397 bp distal
Rr676906 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs49586837
MGI SNP Detail		 Chr9:40643834 Clmp within coordinates of
Cpgi21598 1433 bp distal
Rr676906 within coordinates of
 SNP T T T T T T
rs218418089
MGI SNP Detail		 Chr9:40643907 Clmp within coordinates of
Cpgi21598 1506 bp distal
Rr676906 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs51754547
MGI SNP Detail		 Chr9:40643932 Clmp within coordinates of
Cpgi21598 1531 bp distal
Rr676906 within coordinates of
 SNP T T T T T T
rs49120755
MGI SNP Detail		 Chr9:40643950 Clmp within coordinates of
Cpgi21598 1549 bp distal
Rr676906 within coordinates of
 SNP T T T T
rs226940387
MGI SNP Detail		 Chr9:40643951 Clmp within coordinates of
Cpgi21598 1550 bp distal
Rr676906 within coordinates of
 SNP G/T G G G T G G G G G G T T T T T T T G G G T G G G G T G G G G G G G G G G G G G G G G G G G G G G
rs46019579
MGI SNP Detail		 Chr9:40643956 Clmp within coordinates of
Cpgi21598 1555 bp distal
Rr676906 within coordinates of
 SNP T T T T
rs48380190
MGI SNP Detail		 Chr9:40643970 Clmp within coordinates of
Cpgi21598 1569 bp distal
 SNP T T T T T T
rs47029589
MGI SNP Detail		 Chr9:40643978 Clmp within coordinates of
Cpgi21598 1577 bp distal
 SNP C C C C C C
rs260392160
MGI SNP Detail		 Chr9:40644008 Clmp within coordinates of
Cpgi21598 1607 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs45992908
MGI SNP Detail		 Chr9:40644073 Clmp within coordinates of
Cpgi21598 1672 bp distal
 SNP C C C C C C
rs229913459
MGI SNP Detail		 Chr9:40644128 Clmp within coordinates of
Cpgi21598 1727 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251871356
MGI SNP Detail		 Chr9:40644142 Clmp within coordinates of
Cpgi21598 1741 bp distal
 SNP A/G A G
rs242949388
MGI SNP Detail		 Chr9:40644190 Clmp within coordinates of
Cpgi21598 1789 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213665891
MGI SNP Detail		 Chr9:40644211 Clmp within coordinates of
Cpgi21598 1810 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs238980993
MGI SNP Detail		 Chr9:40644219 Clmp within coordinates of
Cpgi21598 1818 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs50722083
MGI SNP Detail		 Chr9:40644248 Clmp within coordinates of
Cpgi21598 1847 bp distal
 SNP A A A A A A
rs224804736
MGI SNP Detail		 Chr9:40644258 Clmp within coordinates of
Cpgi21598 1857 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs239135784
MGI SNP Detail		 Chr9:40644270 Clmp within coordinates of
Cpgi21598 1869 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs255064303
MGI SNP Detail		 Chr9:40644337 Clmp within coordinates of
Cpgi21598 1936 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 100 of 100
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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