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Mouse SNP Summary
Symbol
Name
ID 		Cpgi22307
CpG island 22307
MGI:5687379

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33272303
MGI SNP Detail		 Chr9:107565718 Cpgi22307 1980 bp proximal
Sema3f within coordinates of
 SNP C/G G G G G G G C G G G G G G G G
rs239629310
MGI SNP Detail		 Chr9:107565907 Cpgi22307 1791 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257731898
MGI SNP Detail		 Chr9:107565911 Cpgi22307 1787 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227965368
MGI SNP Detail		 Chr9:107566118 Cpgi22307 1580 bp proximal
Sema3f within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247149164
MGI SNP Detail		 Chr9:107566121 Cpgi22307 1577 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261290189
MGI SNP Detail		 Chr9:107566155 Cpgi22307 1543 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228973693
MGI SNP Detail		 Chr9:107566250 Cpgi22307 1448 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250573455
MGI SNP Detail		 Chr9:107566251 Cpgi22307 1447 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29978237
MGI SNP Detail		 Chr9:107566253 Cpgi22307 1445 bp proximal
Sema3f within coordinates of
 SNP C/T C C T C C C
rs233871107
MGI SNP Detail		 Chr9:107566254 Cpgi22307 1444 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247194551
MGI SNP Detail		 Chr9:107566326 Cpgi22307 1372 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216686653
MGI SNP Detail		 Chr9:107566327 Cpgi22307 1371 bp proximal
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235559054
MGI SNP Detail		 Chr9:107566360 Cpgi22307 1338 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264266395
MGI SNP Detail		 Chr9:107566375 Cpgi22307 1323 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212188702
MGI SNP Detail		 Chr9:107566421 Cpgi22307 1277 bp proximal
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584082009
MGI SNP Detail		 Chr9:107566446 Cpgi22307 1252 bp proximal
Sema3f within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580626431
MGI SNP Detail		 Chr9:107566473 Cpgi22307 1225 bp proximal
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237437256
MGI SNP Detail		 Chr9:107566490 Cpgi22307 1208 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257328231
MGI SNP Detail		 Chr9:107566734 Cpgi22307 964 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220307620
MGI SNP Detail		 Chr9:107566786 Cpgi22307 912 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584108023
MGI SNP Detail		 Chr9:107566805 Cpgi22307 893 bp proximal
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239518580
MGI SNP Detail		 Chr9:107567021 Cpgi22307 677 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252255893
MGI SNP Detail		 Chr9:107567064 Cpgi22307 634 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222283670
MGI SNP Detail		 Chr9:107567155 Cpgi22307 543 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30330159
MGI SNP Detail		 Chr9:107567241 Cpgi22307 457 bp proximal
Sema3f within coordinates of
 SNP C/T C C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264511277
MGI SNP Detail		 Chr9:107567289 Cpgi22307 409 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228423180
MGI SNP Detail		 Chr9:107567306 Cpgi22307 392 bp proximal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245742709
MGI SNP Detail		 Chr9:107567492 Cpgi22307 206 bp proximal
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262675337
MGI SNP Detail		 Chr9:107567653 Cpgi22307 45 bp proximal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227201926
MGI SNP Detail		 Chr9:107567753 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247144296
MGI SNP Detail		 Chr9:107567754 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216627911
MGI SNP Detail		 Chr9:107567756 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229242000
MGI SNP Detail		 Chr9:107567788 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254774363
MGI SNP Detail		 Chr9:107567791 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212366294
MGI SNP Detail		 Chr9:107567808 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33273925
MGI SNP Detail		 Chr9:107567824 Cpgi22307 within coordinates of
Sema3f within coordinates of
 SNP C/T T T T C T T C C T T
rs259196008
MGI SNP Detail		 Chr9:107567961 Cpgi22307 112 bp distal
Sema3f within coordinates of
 SNP C/T C T
rs262096367
MGI SNP Detail		 Chr9:107568045 Cpgi22307 196 bp distal
Sema3f within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs52407127
MGI SNP Detail		 Chr9:107568069 Cpgi22307 220 bp distal
Sema3f within coordinates of
 SNP C C C C C
rs233055481
MGI SNP Detail		 Chr9:107568269 Cpgi22307 420 bp distal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252199762
MGI SNP Detail		 Chr9:107568518 Cpgi22307 669 bp distal
Sema3f within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222267333
MGI SNP Detail		 Chr9:107569057 Cpgi22307 1208 bp distal
Sema3f within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251935796
MGI SNP Detail		 Chr9:107569170 Cpgi22307 1321 bp distal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255166346
MGI SNP Detail		 Chr9:107569265 Cpgi22307 1416 bp distal
Sema3f within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220634705
MGI SNP Detail		 Chr9:107569356 Cpgi22307 1507 bp distal
Sema3f within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242773859
MGI SNP Detail		 Chr9:107569475 Cpgi22307 1626 bp distal
Sema3f within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29635361
MGI SNP Detail		 Chr9:107569515 Cpgi22307 1666 bp distal
Sema3f within coordinates of
 SNP A/G A A A G A A A
rs227140680
MGI SNP Detail		 Chr9:107569524 Cpgi22307 1675 bp distal
Sema3f within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241147620
MGI SNP Detail		 Chr9:107569536 Cpgi22307 1687 bp distal
Sema3f within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260575513
MGI SNP Detail		 Chr9:107569546 Cpgi22307 1697 bp distal
Sema3f within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233819511
MGI SNP Detail		 Chr9:107569588 Cpgi22307 1739 bp distal
Sema3f within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30343908
MGI SNP Detail		 Chr9:107569713 Cpgi22307 1864 bp distal
Sema3f within coordinates of
 SNP A/G A A A G A A A
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Showing SNP(s) 1 - 52 of 52
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory