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Mouse SNP Summary
Symbol
Name
ID 		Cpgi22654
CpG island 22654
MGI:5687726

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Showing SNP(s) 1 - 63 of 63

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246973950
MGI SNP Detail		 ChrX:21225053 Cpgi22654 1978 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs213370898
MGI SNP Detail		 ChrX:21225054 Cpgi22654 1977 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233302325
MGI SNP Detail		 ChrX:21225270 Cpgi22654 1761 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253462992
MGI SNP Detail		 ChrX:21225387 Cpgi22654 1644 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213073431
MGI SNP Detail		 ChrX:21225437 Cpgi22654 1594 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs242422447
MGI SNP Detail		 ChrX:21225629 Cpgi22654 1402 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261001843
MGI SNP Detail		 ChrX:21225803 Cpgi22654 1228 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs220933090
MGI SNP Detail		 ChrX:21225850 Cpgi22654 1181 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs233761156
MGI SNP Detail		 ChrX:21225876 Cpgi22654 1155 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T
rs249748176
MGI SNP Detail		 ChrX:21225881 Cpgi22654 1150 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs220139702
MGI SNP Detail		 ChrX:21225904 Cpgi22654 1127 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs244086365
MGI SNP Detail		 ChrX:21225925 Cpgi22654 1106 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs29692044
MGI SNP Detail		 ChrX:21226139 Cpgi22654 892 bp proximal
 SNP C/T T T T T T T T T T T T T C T
rs221263137
MGI SNP Detail		 ChrX:21226207 Cpgi22654 824 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29692047
MGI SNP Detail		 ChrX:21226209 Cpgi22654 822 bp proximal
 SNP C/T C C C C C C C C C C C C T
rs261065996
MGI SNP Detail		 ChrX:21226216 Cpgi22654 815 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs227115322
MGI SNP Detail		 ChrX:21226219 Cpgi22654 812 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs247078491
MGI SNP Detail		 ChrX:21226256 Cpgi22654 775 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257223821
MGI SNP Detail		 ChrX:21226334 Cpgi22654 697 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230821040
MGI SNP Detail		 ChrX:21226361 Cpgi22654 670 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs249421772
MGI SNP Detail		 ChrX:21226362 Cpgi22654 669 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T T T T T T T T T G T
rs213732189
MGI SNP Detail		 ChrX:21226371 Cpgi22654 660 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs239741295
MGI SNP Detail		 ChrX:21226372 Cpgi22654 659 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs29692050
MGI SNP Detail		 ChrX:21226409 Cpgi22654 622 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs215481651
MGI SNP Detail		 ChrX:21226437 Cpgi22654 594 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29692053
MGI SNP Detail		 ChrX:21226461 Cpgi22654 570 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs29693016
MGI SNP Detail		 ChrX:21226463 Cpgi22654 568 bp proximal
 SNP C/T T T T T T T T T T T T T T C T
rs249913422
MGI SNP Detail		 ChrX:21226957 Cpgi22654 74 bp proximal
Rr8526 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29693019
MGI SNP Detail		 ChrX:21227144 Cpgi22654 within coordinates of
Rr8526 within coordinates of
Tssr160704 within coordinates of
 SNP C/T C C C C C C C C C C T C C T C
rs220053385
MGI SNP Detail		 ChrX:21227459 Cpgi22654 129 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29693022
MGI SNP Detail		 ChrX:21227520 Cpgi22654 190 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/T T T T T T T C T T T T T T T T
rs255446761
MGI SNP Detail		 ChrX:21227551 Cpgi22654 221 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29693885
MGI SNP Detail		 ChrX:21227571 Cpgi22654 241 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP G/T T T T T T T T T T T G T T G T
rs247456844
MGI SNP Detail		 ChrX:21227622 Cpgi22654 292 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29693888
MGI SNP Detail		 ChrX:21227690 Cpgi22654 360 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/G G G G G G G C G G G G G G G G
rs220949966
MGI SNP Detail		 ChrX:21227795 Cpgi22654 465 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs241068278
MGI SNP Detail		 ChrX:21227808 Cpgi22654 478 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29693891
MGI SNP Detail		 ChrX:21227889 Cpgi22654 559 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/T C C C C C C C C C T C C T C
rs29694704
MGI SNP Detail		 ChrX:21227923 Cpgi22654 593 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G G G G G G G G G G G G G G A
rs230604455
MGI SNP Detail		 ChrX:21228000 Cpgi22654 670 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252044918
MGI SNP Detail		 ChrX:21228038 Cpgi22654 708 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29694707
MGI SNP Detail		 ChrX:21228047 Cpgi22654 717 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G G G G G G G A G G G A G G A A
rs29694710
MGI SNP Detail		 ChrX:21228089 Cpgi22654 759 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/T T T T T T T T T T T C T T C T
rs247826421
MGI SNP Detail		 ChrX:21228159 Cpgi22654 829 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A G A
rs215445939
MGI SNP Detail		 ChrX:21228162 Cpgi22654 832 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G C G G G G G G C G G G G G G G G G G C G
rs29694713
MGI SNP Detail		 ChrX:21228192 Cpgi22654 862 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/C A A A A A A C A A A C A A C C
rs243952331
MGI SNP Detail		 ChrX:21228247 Cpgi22654 917 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29695346
MGI SNP Detail		 ChrX:21228327 Cpgi22654 997 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G A A A A A A A A A A A A A G A
rs29695349
MGI SNP Detail		 ChrX:21228351 Cpgi22654 1021 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/C C C C C C C C C C C C C C A C
rs261599294
MGI SNP Detail		 ChrX:21228397 Cpgi22654 1067 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218179271
MGI SNP Detail		 ChrX:21228426 Cpgi22654 1096 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs242048451
MGI SNP Detail		 ChrX:21228534 Cpgi22654 1204 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255285186
MGI SNP Detail		 ChrX:21228594 Cpgi22654 1264 bp distal
Gm5124 within coordinates of
Rr8526 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29695352
MGI SNP Detail		 ChrX:21228605 Cpgi22654 1275 bp distal
Gm5124 within coordinates of
 SNP C/G G G G G G G C G G G G G G C G
rs29696155
MGI SNP Detail		 ChrX:21228624 Cpgi22654 1294 bp distal
Gm5124 within coordinates of
 SNP A/G A A A A A A A A A A A A A A G
rs250981887
MGI SNP Detail		 ChrX:21228782 Cpgi22654 1452 bp distal
Gm5124 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29696158
MGI SNP Detail		 ChrX:21228787 Cpgi22654 1457 bp distal
Gm5124 within coordinates of
 SNP A/T A A A A A A A A A A T A A T A
rs582106971
MGI SNP Detail		 ChrX:21228849 Cpgi22654 1519 bp distal
Gm5124 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs240936080
MGI SNP Detail		 ChrX:21228887 Cpgi22654 1557 bp distal
Gm5124 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29696161
MGI SNP Detail		 ChrX:21228975 Cpgi22654 1645 bp distal
Gm5124 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs29688056
MGI SNP Detail		 ChrX:21228992 Cpgi22654 1662 bp distal
Gm5124 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs241871152
MGI SNP Detail		 ChrX:21229109 Cpgi22654 1779 bp distal
Gm5124 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29688059
MGI SNP Detail		 ChrX:21229113 Cpgi22654 1783 bp distal
Gm5124 within coordinates of
 SNP A/T A A A A A A T A A A A A A A T
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Showing SNP(s) 1 - 63 of 63
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory