About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Cpgi22738
CpG island 22738
MGI:5687810

<< first < prev1 next > last >>
Showing SNP(s) 1 - 58 of 58

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216454463
MGI SNP Detail
ChrX:58177461 Cpgi22738 1749 bp proximal
Fgf13 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A
rs241805793
MGI SNP Detail
ChrX:58177510 Cpgi22738 1700 bp proximal
Fgf13 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C G C C C C C C C C
rs248520118
MGI SNP Detail
ChrX:58177520 Cpgi22738 1690 bp proximal
Fgf13 within coordinates of
SNP A/G A A A A A A A A A A A A A A G G G G A A G A A A A G A A A A A A A A A G A A A A A A G
rs211698166
MGI SNP Detail
ChrX:58177524 Cpgi22738 1686 bp proximal
Fgf13 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A G A A A A A A A A A
rs230579618
MGI SNP Detail
ChrX:58177536 Cpgi22738 1674 bp proximal
Fgf13 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251171030
MGI SNP Detail
ChrX:58177538 Cpgi22738 1672 bp proximal
Fgf13 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220187393
MGI SNP Detail
ChrX:58177555 Cpgi22738 1655 bp proximal
Fgf13 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A A
rs237784627
MGI SNP Detail
ChrX:58177607 Cpgi22738 1603 bp proximal
Fgf13 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T A T T T T T T T A T T T T
rs263267803
MGI SNP Detail
ChrX:58177764 Cpgi22738 1446 bp proximal
Fgf13 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs226013131
MGI SNP Detail
ChrX:58177790 Cpgi22738 1420 bp proximal
Fgf13 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs251535206
MGI SNP Detail
ChrX:58177842 Cpgi22738 1368 bp proximal
Fgf13 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs253970374
MGI SNP Detail
ChrX:58177912 Cpgi22738 1298 bp proximal
Fgf13 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs218697002
MGI SNP Detail
ChrX:58178036 Cpgi22738 1174 bp proximal
Fgf13 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A C A A A A A C A A A A
rs237977487
MGI SNP Detail
ChrX:58178040 Cpgi22738 1170 bp proximal
Fgf13 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C C C C C A C C C C
rs581791759
MGI SNP Detail
ChrX:58178044 Cpgi22738 1166 bp proximal
Fgf13 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T
rs256781537
MGI SNP Detail
ChrX:58178090 Cpgi22738 1120 bp proximal
Fgf13 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T G T T T T T G T T T T
rs232559833
MGI SNP Detail
ChrX:58178298 Cpgi22738 912 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs253468341
MGI SNP Detail
ChrX:58178329 Cpgi22738 881 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs585212352
MGI SNP Detail
ChrX:58178502 Cpgi22738 708 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C
rs265996806
MGI SNP Detail
ChrX:58178548 Cpgi22738 662 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs232912454
MGI SNP Detail
ChrX:58178561 Cpgi22738 649 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G
rs248534473
MGI SNP Detail
ChrX:58178563 Cpgi22738 647 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T
rs211757488
MGI SNP Detail
ChrX:58178576 Cpgi22738 634 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs230279288
MGI SNP Detail
ChrX:58178646 Cpgi22738 564 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs244683979
MGI SNP Detail
ChrX:58178774 Cpgi22738 436 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214778551
MGI SNP Detail
ChrX:58178827 Cpgi22738 383 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs239929068
MGI SNP Detail
ChrX:58178874 Cpgi22738 336 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259324062
MGI SNP Detail
ChrX:58178991 Cpgi22738 219 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs225993870
MGI SNP Detail
ChrX:58179003 Cpgi22738 207 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579100077
MGI SNP Detail
ChrX:58179059 Cpgi22738 151 bp proximal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs235359711
MGI SNP Detail
ChrX:58179644 Cpgi22738 within coordinates of
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T A A A A A A T A A A A A A A T A A A
rs107825620
MGI SNP Detail
ChrX:58180160 Cpgi22738 within coordinates of
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C C
rs218797516
MGI SNP Detail
ChrX:58180218 Cpgi22738 20 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237689941
MGI SNP Detail
ChrX:58180339 Cpgi22738 141 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs250543431
MGI SNP Detail
ChrX:58180410 Cpgi22738 212 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs224609539
MGI SNP Detail
ChrX:58180571 Cpgi22738 373 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249546101
MGI SNP Detail
ChrX:58180720 Cpgi22738 522 bp distal
Fgf13 within coordinates of
Rr4369 within coordinates of
Rr8657 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G G G G G G G G G G G G
rs264166382
MGI SNP Detail
ChrX:58180723 Cpgi22738 525 bp distal
Fgf13 within coordinates of
Rr4369 within coordinates of
Rr8657 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242576541
MGI SNP Detail
ChrX:58180735 Cpgi22738 537 bp distal
Fgf13 within coordinates of
Rr4369 within coordinates of
Rr8657 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255846275
MGI SNP Detail
ChrX:58180746 Cpgi22738 548 bp distal
Fgf13 within coordinates of
Rr4369 within coordinates of
Rr8657 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224751303
MGI SNP Detail
ChrX:58180768 Cpgi22738 570 bp distal
Fgf13 within coordinates of
Rr4369 within coordinates of
Rr8657 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T
rs244737613
MGI SNP Detail
ChrX:58180858 Cpgi22738 660 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214699974
MGI SNP Detail
ChrX:58180907 Cpgi22738 709 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs231633894
MGI SNP Detail
ChrX:58180959 Cpgi22738 761 bp distal
Fgf13 within coordinates of
Rr8657 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258176236
MGI SNP Detail
ChrX:58181061 Cpgi22738 863 bp distal
Fgf13 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217874654
MGI SNP Detail
ChrX:58181250 Cpgi22738 1052 bp distal
Fgf13 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs235097924
MGI SNP Detail
ChrX:58181254 Cpgi22738 1056 bp distal
Fgf13 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs248054509
MGI SNP Detail
ChrX:58181365 Cpgi22738 1167 bp distal
Fgf13 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213108724
MGI SNP Detail
ChrX:58181367 Cpgi22738 1169 bp distal
Fgf13 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231568558
MGI SNP Detail
ChrX:58181462 Cpgi22738 1264 bp distal
Fgf13 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257944712
MGI SNP Detail
ChrX:58181493 Cpgi22738 1295 bp distal
Fgf13 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs224244136
MGI SNP Detail
ChrX:58181599 Cpgi22738 1401 bp distal
Fgf13 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246900235
MGI SNP Detail
ChrX:58181708 Cpgi22738 1510 bp distal
Fgf13 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263964234
MGI SNP Detail
ChrX:58181810 Cpgi22738 1612 bp distal
Fgf13 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs227130868
MGI SNP Detail
ChrX:58181972 Cpgi22738 1774 bp distal
Fgf13 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs237574170
MGI SNP Detail
ChrX:58182032 Cpgi22738 1834 bp distal
Fgf13 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257032439
MGI SNP Detail
ChrX:58182122 Cpgi22738 1924 bp distal
Fgf13 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224810784
MGI SNP Detail
ChrX:58182195 Cpgi22738 1997 bp distal
Fgf13 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T G T G T T T G T T T T T T G T T T T T T G T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 58 of 58

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory