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Mouse SNP Summary
Symbol
Name
ID
Cpgi22884
CpG island 22884
MGI:5687956

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234231792
MGI SNP Detail
ChrX:102363457 Cpgi22884 1991 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256273504
MGI SNP Detail
ChrX:102363491 Cpgi22884 1957 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219908184
MGI SNP Detail
ChrX:102363559 Cpgi22884 1889 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244015123
MGI SNP Detail
ChrX:102363616 Cpgi22884 1832 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262536065
MGI SNP Detail
ChrX:102363617 Cpgi22884 1831 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219755063
MGI SNP Detail
ChrX:102363654 Cpgi22884 1794 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241326366
MGI SNP Detail
ChrX:102363678 Cpgi22884 1770 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs259124330
MGI SNP Detail
ChrX:102363721 Cpgi22884 1727 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs229298218
MGI SNP Detail
ChrX:102363770 Cpgi22884 1678 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs250581982
MGI SNP Detail
ChrX:102363798 Cpgi22884 1650 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31822590
MGI SNP Detail
ChrX:102363844 Cpgi22884 1604 bp proximal
SNP A/G A A A A A G A A G A A G A
rs228580846
MGI SNP Detail
ChrX:102363861 Cpgi22884 1587 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251818184
MGI SNP Detail
ChrX:102363872 Cpgi22884 1576 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255133758
MGI SNP Detail
ChrX:102363874 Cpgi22884 1574 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227321268
MGI SNP Detail
ChrX:102363876 Cpgi22884 1572 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs583189690
MGI SNP Detail
ChrX:102363916 Cpgi22884 1532 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs245067338
MGI SNP Detail
ChrX:102363919 Cpgi22884 1529 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs217069152
MGI SNP Detail
ChrX:102363953 Cpgi22884 1495 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs586497913
MGI SNP Detail
ChrX:102363959 Cpgi22884 1489 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580929403
MGI SNP Detail
ChrX:102363989 Cpgi22884 1459 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584699136
MGI SNP Detail
ChrX:102364023 Cpgi22884 1425 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs239181172
MGI SNP Detail
ChrX:102364062 Cpgi22884 1386 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29079521
MGI SNP Detail
ChrX:102364134 Cpgi22884 1314 bp proximal
SNP A/G G G G G G G G G G G G G G A G
rs212054257
MGI SNP Detail
ChrX:102364177 Cpgi22884 1271 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs29079520
MGI SNP Detail
ChrX:102364219 Cpgi22884 1229 bp proximal
SNP C/T C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238916394
MGI SNP Detail
ChrX:102364236 Cpgi22884 1212 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257001265
MGI SNP Detail
ChrX:102364268 Cpgi22884 1180 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs587245740
MGI SNP Detail
ChrX:102364306 Cpgi22884 1142 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581371070
MGI SNP Detail
ChrX:102364318 Cpgi22884 1130 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221703226
MGI SNP Detail
ChrX:102364410 Cpgi22884 1038 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29079519
MGI SNP Detail
ChrX:102364459 Cpgi22884 989 bp proximal
SNP C/T T T T T T T T T T C T T C T
rs253048450
MGI SNP Detail
ChrX:102364504 Cpgi22884 944 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs223513464
MGI SNP Detail
ChrX:102364635 Cpgi22884 813 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs29079518
MGI SNP Detail
ChrX:102364688 Cpgi22884 760 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs264958142
MGI SNP Detail
ChrX:102364735 Cpgi22884 713 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29079517
MGI SNP Detail
ChrX:102364816 Cpgi22884 632 bp proximal
SNP C/G C C C C C C G C C C G C C G C
rs247314280
MGI SNP Detail
ChrX:102364858 Cpgi22884 590 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255650417
MGI SNP Detail
ChrX:102364864 Cpgi22884 584 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29079516
MGI SNP Detail
ChrX:102365072 Cdx4 within coordinates of
Cpgi22884 376 bp proximal
SNP A/G G G G G G G A G G G A G G A G
rs31822589
MGI SNP Detail
ChrX:102365138 Cdx4 within coordinates of
Cpgi22884 310 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs259668570
MGI SNP Detail
ChrX:102365330 Cdx4 within coordinates of
Cpgi22884 118 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T
rs233655953
MGI SNP Detail
ChrX:102365416 Cdx4 within coordinates of
Cpgi22884 32 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249619051
MGI SNP Detail
ChrX:102365573 Cdx4 within coordinates of
Cpgi22884 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs212205079
MGI SNP Detail
ChrX:102365576 Cdx4 within coordinates of
Cpgi22884 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs236933309
MGI SNP Detail
ChrX:102365699 Cdx4 within coordinates of
Cpgi22884 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs244983260
MGI SNP Detail
ChrX:102365713 Cdx4 within coordinates of
Cpgi22884 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29079515
MGI SNP Detail
ChrX:102365733 Cdx4 within coordinates of
Cpgi22884 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs233805216
MGI SNP Detail
ChrX:102365736 Cdx4 within coordinates of
Cpgi22884 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29079514
MGI SNP Detail
ChrX:102365988 Cdx4 within coordinates of
Cpgi22884 209 bp distal
SNP C/T T T T T T T C T T T C T T C T
rs223668121
MGI SNP Detail
ChrX:102366116 Cdx4 within coordinates of
Cpgi22884 337 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242170520
MGI SNP Detail
ChrX:102366380 Cdx4 within coordinates of
Cpgi22884 601 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs256308906
MGI SNP Detail
ChrX:102366399 Cdx4 within coordinates of
Cpgi22884 620 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs220207529
MGI SNP Detail
ChrX:102366402 Cdx4 within coordinates of
Cpgi22884 623 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs585248566
MGI SNP Detail
ChrX:102366432 Cdx4 within coordinates of
Cpgi22884 653 bp distal
SNP A A A A A A A A A A A
rs579412956
MGI SNP Detail
ChrX:102366433 Cdx4 within coordinates of
Cpgi22884 654 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244565942
MGI SNP Detail
ChrX:102366530 Cdx4 within coordinates of
Cpgi22884 751 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs255826781
MGI SNP Detail
ChrX:102366751 Cdx4 within coordinates of
Cpgi22884 972 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221614370
MGI SNP Detail
ChrX:102366768 Cdx4 within coordinates of
Cpgi22884 989 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239528538
MGI SNP Detail
ChrX:102366837 Cdx4 within coordinates of
Cpgi22884 1058 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs259635298
MGI SNP Detail
ChrX:102366909 Cdx4 within coordinates of
Cpgi22884 1130 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29079173
MGI SNP Detail
ChrX:102367205 Cdx4 within coordinates of
Cpgi22884 1426 bp distal
SNP A/G A A A A A G A A A G A A G A
rs244772453
MGI SNP Detail
ChrX:102367265 Cdx4 within coordinates of
Cpgi22884 1486 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261216042
MGI SNP Detail
ChrX:102367267 Cdx4 within coordinates of
Cpgi22884 1488 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581732354
MGI SNP Detail
ChrX:102367384 Cdx4 within coordinates of
Cpgi22884 1605 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230806924
MGI SNP Detail
ChrX:102367431 Cdx4 within coordinates of
Cpgi22884 1652 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244950083
MGI SNP Detail
ChrX:102367534 Cdx4 within coordinates of
Cpgi22884 1755 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215910326
MGI SNP Detail
ChrX:102367632 Cdx4 within coordinates of
Cpgi22884 1853 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227222362
MGI SNP Detail
ChrX:102367649 Cdx4 within coordinates of
Cpgi22884 1870 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs248717830
MGI SNP Detail
ChrX:102367679 Cdx4 within coordinates of
Cpgi22884 1900 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217976206
MGI SNP Detail
ChrX:102367709 Cdx4 within coordinates of
Cpgi22884 1930 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239618330
MGI SNP Detail
ChrX:102367729 Cdx4 within coordinates of
Cpgi22884 1950 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584318151
MGI SNP Detail
ChrX:102367763 Cdx4 within coordinates of
Cpgi22884 1984 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 72 of 72

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory