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Mouse SNP Summary
Symbol
Name
ID 		Cpgi22933
CpG island 22933
MGI:5688001

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Showing SNP(s) 1 - 35 of 35

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232253406
MGI SNP Detail		 ChrX:132486837 Cpgi22933 1929 bp proximal
Pcdh19 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs257019322
MGI SNP Detail		 ChrX:132487129 Cpgi22933 1637 bp proximal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs33848822
MGI SNP Detail		 ChrX:132487615 Cpgi22933 1151 bp proximal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs224960585
MGI SNP Detail		 ChrX:132487766 Cpgi22933 1000 bp proximal
Pcdh19 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33848821
MGI SNP Detail		 ChrX:132487871 Cpgi22933 895 bp proximal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G G G A G G
rs211708475
MGI SNP Detail		 ChrX:132487909 Cpgi22933 857 bp proximal
Pcdh19 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230344453
MGI SNP Detail		 ChrX:132487930 Cpgi22933 836 bp proximal
Pcdh19 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263013766
MGI SNP Detail		 ChrX:132488720 Cpgi22933 46 bp proximal
Pcdh19 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs220469232
MGI SNP Detail		 ChrX:132488730 Cpgi22933 36 bp proximal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231930981
MGI SNP Detail		 ChrX:132488817 Cpgi22933 within coordinates of
Pcdh19 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs33848820
MGI SNP Detail		 ChrX:132488872 Cpgi22933 within coordinates of
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs33848819
MGI SNP Detail		 ChrX:132489367 Cpgi22933 312 bp distal
Pcdh19 within coordinates of
 SNP C/T T T T T T T T T T T C T T C T
rs33848818
MGI SNP Detail		 ChrX:132489379 Cpgi22933 324 bp distal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G A G A G
rs264001302
MGI SNP Detail		 ChrX:132489466 Cpgi22933 411 bp distal
Pcdh19 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33848817
MGI SNP Detail		 ChrX:132489518 Cpgi22933 463 bp distal
Pcdh19 within coordinates of
 SNP A/T T T T T T T T A A T A A
rs225085426
MGI SNP Detail		 ChrX:132489556 Cpgi22933 501 bp distal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245026920
MGI SNP Detail		 ChrX:132489611 Cpgi22933 556 bp distal
Pcdh19 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33848816
MGI SNP Detail		 ChrX:132489686 Cpgi22933 631 bp distal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs225058490
MGI SNP Detail		 ChrX:132489689 Cpgi22933 634 bp distal
Pcdh19 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs33848815
MGI SNP Detail		 ChrX:132489729 Cpgi22933 674 bp distal
Pcdh19 within coordinates of
 SNP C/T T T T T T T T C T C C C C
rs253614981
MGI SNP Detail		 ChrX:132489811 Cpgi22933 756 bp distal
Pcdh19 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33848814
MGI SNP Detail		 ChrX:132489812 Cpgi22933 757 bp distal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G A G A A A A
rs260570075
MGI SNP Detail		 ChrX:132490045 Cpgi22933 990 bp distal
Pcdh19 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218542392
MGI SNP Detail		 ChrX:132490317 Cpgi22933 1262 bp distal
Pcdh19 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241528676
MGI SNP Detail		 ChrX:132490346 Cpgi22933 1291 bp distal
Pcdh19 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252582430
MGI SNP Detail		 ChrX:132490441 Cpgi22933 1386 bp distal
Pcdh19 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214625429
MGI SNP Detail		 ChrX:132490614 Cpgi22933 1559 bp distal
Pcdh19 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T
rs231991222
MGI SNP Detail		 ChrX:132490667 Cpgi22933 1612 bp distal
Pcdh19 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs250614596
MGI SNP Detail		 ChrX:132490819 Cpgi22933 1764 bp distal
Pcdh19 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs218263056
MGI SNP Detail		 ChrX:132490863 Cpgi22933 1808 bp distal
Pcdh19 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33848593
MGI SNP Detail		 ChrX:132490954 Cpgi22933 1899 bp distal
Pcdh19 within coordinates of
 SNP A/C A A A A A A A A A A C A C A
rs33848592
MGI SNP Detail		 ChrX:132490978 Cpgi22933 1923 bp distal
Pcdh19 within coordinates of
 SNP C/T T T T T T T T T T T C T T C T
rs33848591
MGI SNP Detail		 ChrX:132490995 Cpgi22933 1940 bp distal
Pcdh19 within coordinates of
 SNP A/G A A A A A A A A A A G A A G A
rs247724519
MGI SNP Detail		 ChrX:132491004 Cpgi22933 1949 bp distal
Pcdh19 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250377055
MGI SNP Detail		 ChrX:132491011 Cpgi22933 1956 bp distal
Pcdh19 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 35 of 35
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory