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Mouse SNP Summary
Symbol
Name
ID 		Cpgi22977
CpG island 22977
MGI:5688045

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584353807
MGI SNP Detail		 ChrX:141171353 Acsl4 within coordinates of
Cpgi22977 1797 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578414375
MGI SNP Detail		 ChrX:141171370 Acsl4 within coordinates of
Cpgi22977 1780 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262515320
MGI SNP Detail		 ChrX:141171397 Acsl4 within coordinates of
Cpgi22977 1753 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs231495158
MGI SNP Detail		 ChrX:141171405 Acsl4 within coordinates of
Cpgi22977 1745 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248990171
MGI SNP Detail		 ChrX:141171411 Acsl4 within coordinates of
Cpgi22977 1739 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs212647082
MGI SNP Detail		 ChrX:141171423 Acsl4 within coordinates of
Cpgi22977 1727 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs228023018
MGI SNP Detail		 ChrX:141171430 Acsl4 within coordinates of
Cpgi22977 1720 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247149270
MGI SNP Detail		 ChrX:141171462 Acsl4 within coordinates of
Cpgi22977 1688 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs214836885
MGI SNP Detail		 ChrX:141171766 Acsl4 within coordinates of
Cpgi22977 1384 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238665127
MGI SNP Detail		 ChrX:141171828 Acsl4 within coordinates of
Cpgi22977 1322 bp proximal
Rr8330 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262002214
MGI SNP Detail		 ChrX:141171920 Acsl4 within coordinates of
Cpgi22977 1230 bp proximal
Rr8330 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29288767
MGI SNP Detail		 ChrX:141171964 Acsl4 within coordinates of
Cpgi22977 1186 bp proximal
Rr8330 within coordinates of
 SNP A/G G G G A
rs236053473
MGI SNP Detail		 ChrX:141171995 Acsl4 within coordinates of
Cpgi22977 1155 bp proximal
Rr8330 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249818835
MGI SNP Detail		 ChrX:141172332 Acsl4 within coordinates of
Cpgi22977 818 bp proximal
Rr8330 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs13484042
MGI SNP Detail		 ChrX:141172444 Acsl4 within coordinates of
Cpgi22977 706 bp proximal
Rr8330 within coordinates of
 SNP A/G G G G A G A A A A A A A A A A A A A A A G A A G A G A A A A G G A G A A A G A A A G A A G G
rs242137432
MGI SNP Detail		 ChrX:141172456 Acsl4 within coordinates of
Cpgi22977 694 bp proximal
Rr8330 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255354186
MGI SNP Detail		 ChrX:141172649 Acsl4 within coordinates of
Cpgi22977 501 bp proximal
Rr8330 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224234427
MGI SNP Detail		 ChrX:141172762 Acsl4 within coordinates of
Cpgi22977 388 bp proximal
Rr8330 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582184844
MGI SNP Detail		 ChrX:141172853 Acsl4 within coordinates of
Cpgi22977 297 bp proximal
Rr8330 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs246931429
MGI SNP Detail		 ChrX:141172865 Acsl4 within coordinates of
Cpgi22977 285 bp proximal
Rr8330 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265167803
MGI SNP Detail		 ChrX:141173062 Acsl4 within coordinates of
Cpgi22977 88 bp proximal
Rr8330 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs29288766
MGI SNP Detail		 ChrX:141173105 Acsl4 within coordinates of
Cpgi22977 45 bp proximal
Rr8330 within coordinates of
 SNP A/G A A A G
rs584484584
MGI SNP Detail		 ChrX:141173122 Acsl4 within coordinates of
Cpgi22977 28 bp proximal
Rr8330 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs236125982
MGI SNP Detail		 ChrX:141173167 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C G C C C C C C C C C C C
rs254837870
MGI SNP Detail		 ChrX:141173223 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228125887
MGI SNP Detail		 ChrX:141173226 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247179623
MGI SNP Detail		 ChrX:141173236 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs214928303
MGI SNP Detail		 ChrX:141173289 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs29288765
MGI SNP Detail		 ChrX:141173322 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
 SNP C/T T T T C
rs250716644
MGI SNP Detail		 ChrX:141173511 Acsl4 within coordinates of
Cpgi22977 within coordinates of
Rr8330 within coordinates of
Tssr164297 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs215088279
MGI SNP Detail		 ChrX:141173740 Cpgi22977 within coordinates of
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs29288764
MGI SNP Detail		 ChrX:141173749 Cpgi22977 within coordinates of
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP A/G G G G G A
rs250323496
MGI SNP Detail		 ChrX:141173802 Cpgi22977 within coordinates of
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs216528367
MGI SNP Detail		 ChrX:141173821 Cpgi22977 within coordinates of
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs235692340
MGI SNP Detail		 ChrX:141174025 Cpgi22977 139 bp distal
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs255429182
MGI SNP Detail		 ChrX:141174049 Cpgi22977 163 bp distal
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224323859
MGI SNP Detail		 ChrX:141174193 Cpgi22977 307 bp distal
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241139176
MGI SNP Detail		 ChrX:141174213 Cpgi22977 327 bp distal
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257470072
MGI SNP Detail		 ChrX:141174214 Cpgi22977 328 bp distal
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223635426
MGI SNP Detail		 ChrX:141174215 Cpgi22977 329 bp distal
Gm61820 within coordinates of
Rr8330 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236220959
MGI SNP Detail		 ChrX:141174313 Cpgi22977 427 bp distal
Rr8330 within coordinates of
 SNP A/G G G G A A A A A A A A A A A A A A A A A A G A A A G A A G A A G A A G A G A A A A A A A G A A A A A A G G
rs29288363
MGI SNP Detail		 ChrX:141174331 Cpgi22977 445 bp distal
Rr8330 within coordinates of
 SNP G/T G G G G T
rs222185879
MGI SNP Detail		 ChrX:141174342 Cpgi22977 456 bp distal
Rr8330 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241382806
MGI SNP Detail		 ChrX:141174390 Cpgi22977 504 bp distal
Rr8330 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265440512
MGI SNP Detail		 ChrX:141174403 Cpgi22977 517 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232110866
MGI SNP Detail		 ChrX:141174579 Cpgi22977 693 bp distal
 SNP C/G G G C C C C C C C C C C C C C C C C C C C C C C G C C G C C G C C G C C C C C C C C C G C C C C C C C C
rs254867961
MGI SNP Detail		 ChrX:141174589 Cpgi22977 703 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262598010
MGI SNP Detail		 ChrX:141174592 Cpgi22977 706 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228153779
MGI SNP Detail		 ChrX:141174615 Cpgi22977 729 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs582613957
MGI SNP Detail		 ChrX:141174632 Cpgi22977 746 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244206453
MGI SNP Detail		 ChrX:141174712 Cpgi22977 826 bp distal
 SNP A/G A A G G G G G G G G G G G G G G G G G G G G A G G A G G A G G A G A G G G G G G G A G G G G G G A
rs236247458
MGI SNP Detail		 ChrX:141174789 Cpgi22977 903 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29288362
MGI SNP Detail		 ChrX:141174808 Cpgi22977 922 bp distal
 SNP C/T T T T T T T C
rs29288361
MGI SNP Detail		 ChrX:141174845 Cpgi22977 959 bp distal
 SNP A/G A A G
rs238814943
MGI SNP Detail		 ChrX:141174888 Cpgi22977 1002 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs262067557
MGI SNP Detail		 ChrX:141175134 Cpgi22977 1248 bp distal
 SNP C/T T T T C C C C C C C C C C C C C C C C C C T C C C T C C T C C T C C T C T C C C C C C C T C C C C C T
rs29288360
MGI SNP Detail		 ChrX:141175135 Cpgi22977 1249 bp distal
 SNP C/G G G G G G G G C G G
rs230376413
MGI SNP Detail		 ChrX:141175177 Cpgi22977 1291 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586049903
MGI SNP Detail		 ChrX:141175384 Cpgi22977 1498 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249271091
MGI SNP Detail		 ChrX:141175446 Cpgi22977 1560 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222217276
MGI SNP Detail		 ChrX:141175506 Cpgi22977 1620 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241800420
MGI SNP Detail		 ChrX:141175552 Cpgi22977 1666 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263299145
MGI SNP Detail		 ChrX:141175646 Cpgi22977 1760 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224932041
MGI SNP Detail		 ChrX:141175792 Cpgi22977 1906 bp distal
 SNP A/G G G A A A A A A A A A A A A A A A G A G G A A G A G G A G A G G A A A A G A A A G A A A G A A G
rs242811628
MGI SNP Detail		 ChrX:141175822 Cpgi22977 1936 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265198278
MGI SNP Detail		 ChrX:141175869 Cpgi22977 1983 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 66 of 66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory