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Mouse SNP Summary
Symbol
Name
ID 		Cpgi23008
CpG island 23008
MGI:5688076

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29292331
MGI SNP Detail		 ChrX:151920827 Cpgi23008 1994 bp proximal
 SNP G/T G G G G G G T G G G T G G T G
rs217491943
MGI SNP Detail		 ChrX:151920828 Cpgi23008 1993 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238017325
MGI SNP Detail		 ChrX:151921050 Cpgi23008 1771 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264323372
MGI SNP Detail		 ChrX:151921052 Cpgi23008 1769 bp proximal
 SNP C/G C C C C G C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C G C
rs29292330
MGI SNP Detail		 ChrX:151921123 Cpgi23008 1698 bp proximal
 SNP C/T C C T C C C T C C C C C C C C
rs230754828
MGI SNP Detail		 ChrX:151921233 Cpgi23008 1588 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250396903
MGI SNP Detail		 ChrX:151921271 Cpgi23008 1550 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218167219
MGI SNP Detail		 ChrX:151921329 Cpgi23008 1492 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239581267
MGI SNP Detail		 ChrX:151921346 Cpgi23008 1475 bp proximal
 SNP C/T T T T C C C C C C C C C C C C C C C C C C C C C C C C C T T C T C C C C C C C C C C T C C C C C C C T C C
rs256912911
MGI SNP Detail		 ChrX:151921474 Cpgi23008 1347 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225062246
MGI SNP Detail		 ChrX:151921575 Cpgi23008 1246 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C T C C C C
rs244880160
MGI SNP Detail		 ChrX:151921843 Cpgi23008 978 bp proximal
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G
rs266086242
MGI SNP Detail		 ChrX:151921910 Cpgi23008 911 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29292329
MGI SNP Detail		 ChrX:151922283 Cpgi23008 538 bp proximal
 SNP C/T T T T T T T C T T T T T T T T
rs236397307
MGI SNP Detail		 ChrX:151922289 Cpgi23008 532 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254244124
MGI SNP Detail		 ChrX:151922385 Cpgi23008 436 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226405764
MGI SNP Detail		 ChrX:151922412 Cpgi23008 409 bp proximal
Rr8384 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29292328
MGI SNP Detail		 ChrX:151922495 Cpgi23008 326 bp proximal
Rr8384 within coordinates of
 SNP C/T C C C C C C T C C C T C C T C
rs29292327
MGI SNP Detail		 ChrX:151922519 Cpgi23008 302 bp proximal
Rr8384 within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
rs232474480
MGI SNP Detail		 ChrX:151922549 Cpgi23008 272 bp proximal
Rr8384 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs254850739
MGI SNP Detail		 ChrX:151922686 Cpgi23008 135 bp proximal
Rr8384 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs216868337
MGI SNP Detail		 ChrX:151923095 Cpgi23008 within coordinates of
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230665061
MGI SNP Detail		 ChrX:151923172 Cpgi23008 within coordinates of
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs243636180
MGI SNP Detail		 ChrX:151923248 Cpgi23008 within coordinates of
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C
rs29292326
MGI SNP Detail		 ChrX:151923261 Cpgi23008 within coordinates of
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/G G G G G G G G G G G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236931187
MGI SNP Detail		 ChrX:151923648 Cpgi23008 326 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262017497
MGI SNP Detail		 ChrX:151923965 Cpgi23008 643 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224835076
MGI SNP Detail		 ChrX:151924015 Cpgi23008 693 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239864583
MGI SNP Detail		 ChrX:151924016 Cpgi23008 694 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260706951
MGI SNP Detail		 ChrX:151924118 Cpgi23008 796 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs29292325
MGI SNP Detail		 ChrX:151924139 Cpgi23008 817 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/G A A A A A A G A A A G A A G A
rs236460805
MGI SNP Detail		 ChrX:151924266 Cpgi23008 944 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580979503
MGI SNP Detail		 ChrX:151924285 Cpgi23008 963 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/T C C C T C T T T T C T T T T T T T T T T T T T T T C C T C T T T T T C T T T T C C T T T T T T C
rs29292324
MGI SNP Detail		 ChrX:151924337 Cpgi23008 1015 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/T T C T C C C T C C T T C C T T
rs29292093
MGI SNP Detail		 ChrX:151924408 Cpgi23008 1086 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/C C C C C C C A C C C A C C A C
rs243573088
MGI SNP Detail		 ChrX:151924427 Cpgi23008 1105 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs29292092
MGI SNP Detail		 ChrX:151924453 Cpgi23008 1131 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/G A G A G G G A G G A A G G A A
rs29292091
MGI SNP Detail		 ChrX:151924512 Cpgi23008 1190 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP C/T T C T C C C C C T C C C C T
rs260502298
MGI SNP Detail		 ChrX:151924540 Cpgi23008 1218 bp distal
Rr8384 within coordinates of
Rragb within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260770836
MGI SNP Detail		 ChrX:151924672 Cpgi23008 1350 bp distal
Rragb within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs225094589
MGI SNP Detail		 ChrX:151924809 Cpgi23008 1487 bp distal
Rr9381 within coordinates of
Rragb within coordinates of
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G
rs29292090
MGI SNP Detail		 ChrX:151924882 Cpgi23008 1560 bp distal
Rr9381 within coordinates of
Rragb within coordinates of
 SNP A/C C C C C C C A C C C C C C C C
rs29292089
MGI SNP Detail		 ChrX:151924983 Cpgi23008 1661 bp distal
Rr9381 within coordinates of
Rragb within coordinates of
 SNP A/C A C A A A C A A C C A A C C
rs29292088
MGI SNP Detail		 ChrX:151924999 Cpgi23008 1677 bp distal
Rr9381 within coordinates of
Rragb within coordinates of
 SNP A/T A T T T A T T A T T T T
rs29292087
MGI SNP Detail		 ChrX:151925057 Cpgi23008 1735 bp distal
Rragb within coordinates of
 SNP A/G A G G G G A G G A A G G A
rs217196241
MGI SNP Detail		 ChrX:151925059 Cpgi23008 1737 bp distal
Rragb within coordinates of
 SNP A/G A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A G A
rs29292086
MGI SNP Detail		 ChrX:151925070 Cpgi23008 1748 bp distal
Rragb within coordinates of
 SNP C/T T C C C C C C C T C C C C C
rs253047461
MGI SNP Detail		 ChrX:151925096 Cpgi23008 1774 bp distal
Rragb within coordinates of
 SNP A/G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G
rs29292085
MGI SNP Detail		 ChrX:151925127 Cpgi23008 1805 bp distal
Rragb within coordinates of
 SNP A/G G G G G G A G G G A G G A A
rs583503356
MGI SNP Detail		 ChrX:151925182 Cpgi23008 1860 bp distal
Rragb within coordinates of
 SNP C/T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230483511
MGI SNP Detail		 ChrX:151925207 Cpgi23008 1885 bp distal
Rragb within coordinates of
 SNP A/G G G G G A G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G A G G G G G G G A G
rs247982745
MGI SNP Detail		 ChrX:151925209 Cpgi23008 1887 bp distal
Rragb within coordinates of
 SNP C/T C C T C T T T T T T T T T T T T T C T T C T T T T C C C T T T T C T T C T C T T C T C C C
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Showing SNP(s) 1 - 52 of 52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/17/2024
MGI 6.24 		The Jackson Laboratory
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