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Mouse SNP Summary
Symbol
Name
ID
Cpgi23060
CpG island 23060
MGI:5688128

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Showing SNP(s) 1 - 93 of 93

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221072725
MGI SNP Detail
ChrX:168660659 Cpgi23060 1936 bp proximal
Mid1 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233670927
MGI SNP Detail
ChrX:168660686 Cpgi23060 1909 bp proximal
Mid1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C C T C C C
rs252675354
MGI SNP Detail
ChrX:168660687 Cpgi23060 1908 bp proximal
Mid1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A G A A A
rs222923943
MGI SNP Detail
ChrX:168660739 Cpgi23060 1856 bp proximal
Mid1 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236004101
MGI SNP Detail
ChrX:168660766 Cpgi23060 1829 bp proximal
Mid1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264832163
MGI SNP Detail
ChrX:168660969 Cpgi23060 1626 bp proximal
Mid1 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222410861
MGI SNP Detail
ChrX:168661043 Cpgi23060 1552 bp proximal
Mid1 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246702235
MGI SNP Detail
ChrX:168661096 Cpgi23060 1499 bp proximal
Mid1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs263181740
MGI SNP Detail
ChrX:168661236 Cpgi23060 1359 bp proximal
Mid1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228073900
MGI SNP Detail
ChrX:168661284 Cpgi23060 1311 bp proximal
Mid1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247737045
MGI SNP Detail
ChrX:168661359 Cpgi23060 1236 bp proximal
Mid1 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs260976861
MGI SNP Detail
ChrX:168661391 Cpgi23060 1204 bp proximal
Mid1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224023716
MGI SNP Detail
ChrX:168661396 Cpgi23060 1199 bp proximal
Mid1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249633780
MGI SNP Detail
ChrX:168661654 Cpgi23060 941 bp proximal
Mid1 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31808080
MGI SNP Detail
ChrX:168661746 Cpgi23060 849 bp proximal
Mid1 within coordinates of
SNP C/T C C C C C C T C C C C C C C
rs236491637
MGI SNP Detail
ChrX:168661885 Cpgi23060 710 bp proximal
Mid1 within coordinates of
SNP A/T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T
rs252684896
MGI SNP Detail
ChrX:168661923 Cpgi23060 672 bp proximal
Mid1 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222729225
MGI SNP Detail
ChrX:168661931 Cpgi23060 664 bp proximal
Mid1 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236494730
MGI SNP Detail
ChrX:168661981 Cpgi23060 614 bp proximal
Mid1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31808082
MGI SNP Detail
ChrX:168662001 Cpgi23060 594 bp proximal
Mid1 within coordinates of
SNP C/T T T T T T T C T T T T T T T
rs222306301
MGI SNP Detail
ChrX:168662007 Cpgi23060 588 bp proximal
Mid1 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244019410
MGI SNP Detail
ChrX:168662056 Cpgi23060 539 bp proximal
Mid1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31809155
MGI SNP Detail
ChrX:168662115 Cpgi23060 480 bp proximal
Mid1 within coordinates of
SNP A/G A A A A A A A A A A A A A G
rs221817857
MGI SNP Detail
ChrX:168662191 Cpgi23060 404 bp proximal
Mid1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586156781
MGI SNP Detail
ChrX:168662212 Cpgi23060 383 bp proximal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31809156
MGI SNP Detail
ChrX:168662214 Cpgi23060 381 bp proximal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T C T T T T T T T T
rs261026106
MGI SNP Detail
ChrX:168662248 Cpgi23060 347 bp proximal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223888710
MGI SNP Detail
ChrX:168662368 Cpgi23060 227 bp proximal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244603041
MGI SNP Detail
ChrX:168662397 Cpgi23060 198 bp proximal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs31809159
MGI SNP Detail
ChrX:168662502 Cpgi23060 93 bp proximal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A G A A A A A A A
rs230894838
MGI SNP Detail
ChrX:168662630 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
Tssr162728 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31809162
MGI SNP Detail
ChrX:168662691 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A G A A A A A A A
rs215407587
MGI SNP Detail
ChrX:168662712 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs227915170
MGI SNP Detail
ChrX:168662737 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs247020621
MGI SNP Detail
ChrX:168662749 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs31810194
MGI SNP Detail
ChrX:168662779 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G C G G G G G G G
rs31810197
MGI SNP Detail
ChrX:168662798 Cpgi23060 within coordinates of
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T C T T T T T T T
rs578550797
MGI SNP Detail
ChrX:168662870 Cpgi23060 13 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs261602032
MGI SNP Detail
ChrX:168662915 Cpgi23060 58 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214078066
MGI SNP Detail
ChrX:168662925 Cpgi23060 68 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T T T T T T T T T T T T T T
rs239126473
MGI SNP Detail
ChrX:168662963 Cpgi23060 106 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252698057
MGI SNP Detail
ChrX:168662972 Cpgi23060 115 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G G G G G G G G G A G G G G
rs221654931
MGI SNP Detail
ChrX:168663015 Cpgi23060 158 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241996332
MGI SNP Detail
ChrX:168663017 Cpgi23060 160 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31810200
MGI SNP Detail
ChrX:168663020 Cpgi23060 163 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G C C C C C C G C C C C C C C
rs220061493
MGI SNP Detail
ChrX:168663026 Cpgi23060 169 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241859357
MGI SNP Detail
ChrX:168663100 Cpgi23060 243 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264984653
MGI SNP Detail
ChrX:168663133 Cpgi23060 276 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230695527
MGI SNP Detail
ChrX:168663157 Cpgi23060 300 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31810202
MGI SNP Detail
ChrX:168663192 Cpgi23060 335 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257560292
MGI SNP Detail
ChrX:168663198 Cpgi23060 341 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31811134
MGI SNP Detail
ChrX:168663366 Cpgi23060 509 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G A G G G G G G G
rs246931121
MGI SNP Detail
ChrX:168663409 Cpgi23060 552 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217626006
MGI SNP Detail
ChrX:168663464 Cpgi23060 607 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs228732268
MGI SNP Detail
ChrX:168663465 Cpgi23060 608 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249967572
MGI SNP Detail
ChrX:168663550 Cpgi23060 693 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs582255306
MGI SNP Detail
ChrX:168663592 Cpgi23060 735 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs31811137
MGI SNP Detail
ChrX:168663601 Cpgi23060 744 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C T C C C C C C C
rs237189508
MGI SNP Detail
ChrX:168663641 Cpgi23060 784 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs252994950
MGI SNP Detail
ChrX:168663704 Cpgi23060 847 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216057158
MGI SNP Detail
ChrX:168663744 Cpgi23060 887 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235456209
MGI SNP Detail
ChrX:168663801 Cpgi23060 944 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255136198
MGI SNP Detail
ChrX:168663815 Cpgi23060 958 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220445347
MGI SNP Detail
ChrX:168663838 Cpgi23060 981 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244945045
MGI SNP Detail
ChrX:168663865 Cpgi23060 1008 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256778615
MGI SNP Detail
ChrX:168663869 Cpgi23060 1012 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C A C A C C
rs222701842
MGI SNP Detail
ChrX:168663873 Cpgi23060 1016 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239023974
MGI SNP Detail
ChrX:168663922 Cpgi23060 1065 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C T C C C C
rs257886706
MGI SNP Detail
ChrX:168664012 Cpgi23060 1155 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs221807289
MGI SNP Detail
ChrX:168664035 Cpgi23060 1178 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241118053
MGI SNP Detail
ChrX:168664054 Cpgi23060 1197 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266201492
MGI SNP Detail
ChrX:168664055 Cpgi23060 1198 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs228159879
MGI SNP Detail
ChrX:168664061 Cpgi23060 1204 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31811140
MGI SNP Detail
ChrX:168664072 Cpgi23060 1215 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C T C C C C C C C
rs262418632
MGI SNP Detail
ChrX:168664097 Cpgi23060 1240 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231294986
MGI SNP Detail
ChrX:168664098 Cpgi23060 1241 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246546287
MGI SNP Detail
ChrX:168664107 Cpgi23060 1250 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216118383
MGI SNP Detail
ChrX:168664124 Cpgi23060 1267 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235689250
MGI SNP Detail
ChrX:168664136 Cpgi23060 1279 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G G G G G G T G G G G
rs585923244
MGI SNP Detail
ChrX:168664145 Cpgi23060 1288 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C
rs579463440
MGI SNP Detail
ChrX:168664150 Cpgi23060 1293 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C C C C C C C C C A C C C
rs583173562
MGI SNP Detail
ChrX:168664157 Cpgi23060 1300 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248680363
MGI SNP Detail
ChrX:168664183 Cpgi23060 1326 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs212007346
MGI SNP Detail
ChrX:168664287 Cpgi23060 1430 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235448032
MGI SNP Detail
ChrX:168664315 Cpgi23060 1458 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261987501
MGI SNP Detail
ChrX:168664349 Cpgi23060 1492 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223339014
MGI SNP Detail
ChrX:168664406 Cpgi23060 1549 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232597169
MGI SNP Detail
ChrX:168664544 Cpgi23060 1687 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs251646837
MGI SNP Detail
ChrX:168664597 Cpgi23060 1740 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221816994
MGI SNP Detail
ChrX:168664745 Cpgi23060 1888 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs241303426
MGI SNP Detail
ChrX:168664787 Cpgi23060 1930 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs264566353
MGI SNP Detail
ChrX:168664815 Cpgi23060 1958 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220394245
MGI SNP Detail
ChrX:168664821 Cpgi23060 1964 bp distal
Mid1 within coordinates of
Rr8476 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 93 of 93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory