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Mouse SNP Summary
Symbol
Name
ID
Tssr1404
transcription start site region 1404
MGI:5929171

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Showing SNP(s) 1 - 100 of 140

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263359154
MGI SNP Detail
Chr4:156075433 B3galt6 within coordinates of
Tssr1404 1963 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs48899276
MGI SNP Detail
Chr4:156075444 B3galt6 within coordinates of
Tssr1404 1952 bp upstream
SNP C/T T T T C T
rs49898170
MGI SNP Detail
Chr4:156075462 B3galt6 within coordinates of
Tssr1404 1934 bp upstream
SNP A/G A A A G A
rs266195336
MGI SNP Detail
Chr4:156075504 B3galt6 within coordinates of
Tssr1404 1892 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223657361
MGI SNP Detail
Chr4:156075510 B3galt6 within coordinates of
Tssr1404 1886 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243202596
MGI SNP Detail
Chr4:156075526 B3galt6 within coordinates of
Tssr1404 1870 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212776481
MGI SNP Detail
Chr4:156075544 B3galt6 within coordinates of
Tssr1404 1852 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580210128
MGI SNP Detail
Chr4:156075608 B3galt6 within coordinates of
Tssr1404 1788 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225099228
MGI SNP Detail
Chr4:156075623 B3galt6 within coordinates of
Tssr1404 1773 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256301842
MGI SNP Detail
Chr4:156075627 B3galt6 within coordinates of
Tssr1404 1769 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215690751
MGI SNP Detail
Chr4:156075639 B3galt6 within coordinates of
Tssr1404 1757 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240624534
MGI SNP Detail
Chr4:156075643 B3galt6 within coordinates of
Tssr1404 1753 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259915309
MGI SNP Detail
Chr4:156075662 B3galt6 within coordinates of
Tssr1404 1734 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218654173
MGI SNP Detail
Chr4:156075668 B3galt6 within coordinates of
Tssr1404 1728 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs52543117
MGI SNP Detail
Chr4:156075814 B3galt6 within coordinates of
Rr606629 within coordinates of
Tssr1404 1582 bp upstream
SNP A/G G A G
rs583326169
MGI SNP Detail
Chr4:156075819 B3galt6 within coordinates of
Rr606629 within coordinates of
Tssr1404 1577 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs52094793
MGI SNP Detail
Chr4:156075820 B3galt6 within coordinates of
Tssr1404 1576 bp upstream
SNP A/T A A T A
rs263130117
MGI SNP Detail
Chr4:156075849 B3galt6 within coordinates of
Tssr1404 1547 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T
rs264472265
MGI SNP Detail
Chr4:156075861 B3galt6 within coordinates of
Tssr1404 1535 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580733038
MGI SNP Detail
Chr4:156075870 B3galt6 within coordinates of
Tssr1404 1526 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs52240739
MGI SNP Detail
Chr4:156075878 B3galt6 within coordinates of
Tssr1404 1518 bp upstream
SNP T T T
rs52279935
MGI SNP Detail
Chr4:156075883 B3galt6 within coordinates of
Tssr1404 1513 bp upstream
SNP T T T
rs225192810
MGI SNP Detail
Chr4:156075895 B3galt6 within coordinates of
Tssr1404 1501 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49105520
MGI SNP Detail
Chr4:156075902 B3galt6 within coordinates of
Tssr1404 1494 bp upstream
SNP T T
rs52386798
MGI SNP Detail
Chr4:156075908 B3galt6 within coordinates of
Tssr1404 1488 bp upstream
SNP C/T C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583188599
MGI SNP Detail
Chr4:156075929 B3galt6 within coordinates of
Tssr1404 1467 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216176663
MGI SNP Detail
Chr4:156075940 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1456 bp upstream
SNP A/G A A A A A G A A G A A A G G G G G G G A A A A A A A A G G A G G G A A G G A G A A A A A G A A A A A
rs259191957
MGI SNP Detail
Chr4:156075943 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1453 bp upstream
SNP A/G G G G G G A G G A G G G A A A A A A A A G G G G G G G A A G A A A G G A A G A G G G G G G A G G A G G G G
rs217107443
MGI SNP Detail
Chr4:156075945 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1451 bp upstream
SNP C/G G G G G G C G G C G G G C C C C C C C G G G G G G G G C C G C C C G G C C G C G G G G G G C G G G G G G G
rs33213407
MGI SNP Detail
Chr4:156076006 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1390 bp upstream
SNP C/T C C C T C T T T C
rs250245710
MGI SNP Detail
Chr4:156076032 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1364 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213425124
MGI SNP Detail
Chr4:156076061 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1335 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239346663
MGI SNP Detail
Chr4:156076078 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1318 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C A C C C C C A C C C C
rs258939166
MGI SNP Detail
Chr4:156076079 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1317 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33213410
MGI SNP Detail
Chr4:156076080 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1316 bp upstream
SNP A/G A A A A G G G A
rs247966611
MGI SNP Detail
Chr4:156076095 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1301 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264403238
MGI SNP Detail
Chr4:156076104 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1292 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218064169
MGI SNP Detail
Chr4:156076201 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1195 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33213413
MGI SNP Detail
Chr4:156076312 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1084 bp upstream
SNP A/G A A A G A A G G G A
rs33214226
MGI SNP Detail
Chr4:156076387 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 1009 bp upstream
SNP C/T T T T T C T C C C T
rs47862655
MGI SNP Detail
Chr4:156076446 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 950 bp upstream
SNP A/G G G A G
rs247971006
MGI SNP Detail
Chr4:156076483 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 913 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263122279
MGI SNP Detail
Chr4:156076513 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 883 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232886343
MGI SNP Detail
Chr4:156076540 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 856 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250187952
MGI SNP Detail
Chr4:156076564 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 832 bp upstream
SNP C/T C T
rs253893415
MGI SNP Detail
Chr4:156076567 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 829 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222486762
MGI SNP Detail
Chr4:156076609 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 787 bp upstream
SNP C/G G C
rs223948412
MGI SNP Detail
Chr4:156076618 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 778 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243955967
MGI SNP Detail
Chr4:156076666 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Tssr1404 730 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213311121
MGI SNP Detail
Chr4:156076678 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 718 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32477160
MGI SNP Detail
Chr4:156076729 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 667 bp upstream
SNP C/T T C T C T
rs256925822
MGI SNP Detail
Chr4:156076744 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 652 bp upstream
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C T C C C
rs217101596
MGI SNP Detail
Chr4:156076747 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 649 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs242413653
MGI SNP Detail
Chr4:156076759 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 637 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253554078
MGI SNP Detail
Chr4:156076823 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 573 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218273589
MGI SNP Detail
Chr4:156076824 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 572 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230813510
MGI SNP Detail
Chr4:156076841 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 555 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249796617
MGI SNP Detail
Chr4:156076860 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 536 bp upstream
Tssr40748 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T
rs220060251
MGI SNP Detail
Chr4:156076963 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 433 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245507952
MGI SNP Detail
Chr4:156077007 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 389 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C T C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265747080
MGI SNP Detail
Chr4:156077011 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Tssr1404 385 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224896386
MGI SNP Detail
Chr4:156077036 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606630 within coordinates of
Tssr1404 360 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249965460
MGI SNP Detail
Chr4:156077098 B3galt6 within coordinates of
Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 298 bp upstream
Tssr44988 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261273853
MGI SNP Detail
Chr4:156077113 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606632 within coordinates of
Tssr1404 283 bp upstream
Tssr44988 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224209648
MGI SNP Detail
Chr4:156077139 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606632 within coordinates of
Tssr1404 257 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C
rs244223181
MGI SNP Detail
Chr4:156077140 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606632 within coordinates of
Tssr1404 256 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587339522
MGI SNP Detail
Chr4:156077167 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 229 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581611279
MGI SNP Detail
Chr4:156077194 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 202 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs585005376
MGI SNP Detail
Chr4:156077225 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 171 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587213450
MGI SNP Detail
Chr4:156077252 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 144 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581332075
MGI SNP Detail
Chr4:156077253 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 143 bp upstream
SNP A/G A A A A A A A A A A A A A A A G G A A A A A G A A G G A A A A A A A A G A A A A A A
rs257241083
MGI SNP Detail
Chr4:156077280 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Tssr1404 116 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs387380447
MGI SNP Detail
Chr4:156077355 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606633 within coordinates of
Sdf4 within coordinates of
Tssr1404 41 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G G G G G G G G G G A A G
rs581862919
MGI SNP Detail
Chr4:156077382 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606633 within coordinates of
Sdf4 within coordinates of
Tssr1404 14 bp upstream
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252100742
MGI SNP Detail
Chr4:156077413 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606633 within coordinates of
Sdf4 within coordinates of
Tssr1404 10 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C G C C C G C C C C G C C G G C G C C C C C C C C G C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216888985
MGI SNP Detail
Chr4:156077414 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Rr606633 within coordinates of
Sdf4 within coordinates of
Tssr1404 11 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G A G G G G G G G G G G A G G G G G
rs247687601
MGI SNP Detail
Chr4:156077448 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 45 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212329728
MGI SNP Detail
Chr4:156077454 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 51 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231058928
MGI SNP Detail
Chr4:156077496 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 93 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262851330
MGI SNP Detail
Chr4:156077504 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 101 bp downstream
SNP C/T T C
rs223509102
MGI SNP Detail
Chr4:156077558 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 155 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240061752
MGI SNP Detail
Chr4:156077561 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 158 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G G A A G A A A A G A G G G G A G A A A A G A A A A G A A A A A A
rs224917747
MGI SNP Detail
Chr4:156077606 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 203 bp downstream
Tssr40749 within coordinates of
SNP G/T T G
rs226368431
MGI SNP Detail
Chr4:156077613 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 210 bp downstream
Tssr40749 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242908264
MGI SNP Detail
Chr4:156077661 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 258 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261186599
MGI SNP Detail
Chr4:156077702 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 299 bp downstream
Tssr40750 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G
rs245957700
MGI SNP Detail
Chr4:156077803 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 400 bp downstream
SNP A/G A G
rs238042024
MGI SNP Detail
Chr4:156077811 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606631 within coordinates of
Sdf4 within coordinates of
Tssr1404 408 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257517877
MGI SNP Detail
Chr4:156077848 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 445 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230661511
MGI SNP Detail
Chr4:156077868 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 465 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247393944
MGI SNP Detail
Chr4:156077873 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 470 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263467464
MGI SNP Detail
Chr4:156077985 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 582 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233822383
MGI SNP Detail
Chr4:156078021 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 618 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247192068
MGI SNP Detail
Chr4:156078082 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 679 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212369287
MGI SNP Detail
Chr4:156078093 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 690 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262384424
MGI SNP Detail
Chr4:156078104 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 701 bp downstream
SNP C/G C G
rs578535823
MGI SNP Detail
Chr4:156078123 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 720 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226166141
MGI SNP Detail
Chr4:156078127 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 724 bp downstream
SNP G G G
rs215615514
MGI SNP Detail
Chr4:156078190 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 787 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T A A T T A T T T T A T T A A A A T A T T T T A T T T T A T T T T T T T
rs237988027
MGI SNP Detail
Chr4:156078191 Cpgi15496 within coordinates of
Rr377473 within coordinates of
Rr606635 within coordinates of
Sdf4 within coordinates of
Tssr1404 788 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C A A C C A C C C C A C C A A A A C A C C C C A C C C C A C C C C C C C
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Showing SNP(s) 1 - 100 of 140

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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