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Mouse SNP Summary
Symbol
Name
ID 		Tssr1773
transcription start site region 1773
MGI:5929540

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228898639
MGI SNP Detail		 Chr6:4745491 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1951 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T
rs253624404
MGI SNP Detail		 Chr6:4745577 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1865 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579422848
MGI SNP Detail		 Chr6:4745617 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1825 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs266086250
MGI SNP Detail		 Chr6:4745956 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1486 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231432611
MGI SNP Detail		 Chr6:4746005 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1437 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247025170
MGI SNP Detail		 Chr6:4746021 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1421 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213550467
MGI SNP Detail		 Chr6:4746068 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1374 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581771795
MGI SNP Detail		 Chr6:4746088 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1354 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232572797
MGI SNP Detail		 Chr6:4746281 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1161 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243509774
MGI SNP Detail		 Chr6:4746359 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1083 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs585526216
MGI SNP Detail		 Chr6:4746418 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1024 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212793770
MGI SNP Detail		 Chr6:4746421 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1021 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C
rs237371856
MGI SNP Detail		 Chr6:4746432 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1010 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260312588
MGI SNP Detail		 Chr6:4746438 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1004 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227208065
MGI SNP Detail		 Chr6:4746440 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 1002 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233032016
MGI SNP Detail		 Chr6:4746498 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 944 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252061152
MGI SNP Detail		 Chr6:4746590 Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 852 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219612680
MGI SNP Detail		 Chr6:4746832 Cpgi17126 within coordinates of
Rr146220 within coordinates of
Sgce within coordinates of
Tssr1773 610 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs257550298
MGI SNP Detail		 Chr6:4747462 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 10 bp downstream
 SNP C/T C T
rs238648475
MGI SNP Detail		 Chr6:4747581 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 129 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264763615
MGI SNP Detail		 Chr6:4747805 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 353 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222092940
MGI SNP Detail		 Chr6:4747904 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 452 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249789621
MGI SNP Detail		 Chr6:4748007 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 555 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs264267088
MGI SNP Detail		 Chr6:4748010 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 558 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs578645665
MGI SNP Detail		 Chr6:4748036 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 584 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582155518
MGI SNP Detail		 Chr6:4748039 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 587 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227012981
MGI SNP Detail		 Chr6:4748127 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 675 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247060442
MGI SNP Detail		 Chr6:4748133 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 681 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3712760
MGI SNP Detail		 Chr6:4748196 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 744 bp downstream
 SNP C/T C C C T C C C
rs213272641
MGI SNP Detail		 Chr6:4748197 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 745 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239480738
MGI SNP Detail		 Chr6:4748249 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 797 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260121920
MGI SNP Detail		 Chr6:4748262 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 810 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs219303021
MGI SNP Detail		 Chr6:4748291 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 839 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232885489
MGI SNP Detail		 Chr6:4748295 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 843 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252137764
MGI SNP Detail		 Chr6:4748313 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 861 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219518254
MGI SNP Detail		 Chr6:4748341 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 889 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs232401063
MGI SNP Detail		 Chr6:4748351 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 899 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs255746717
MGI SNP Detail		 Chr6:4748382 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 930 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs221372133
MGI SNP Detail		 Chr6:4748384 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 932 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs247977393
MGI SNP Detail		 Chr6:4748413 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 961 bp downstream
 SNP A/C/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T C T T T T
rs266229559
MGI SNP Detail		 Chr6:4748442 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 990 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220730338
MGI SNP Detail		 Chr6:4748482 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1030 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs240978886
MGI SNP Detail		 Chr6:4748641 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1189 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257371760
MGI SNP Detail		 Chr6:4748668 Cpgi17126 within coordinates of
Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1216 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226330979
MGI SNP Detail		 Chr6:4748810 Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1358 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs243897280
MGI SNP Detail		 Chr6:4748880 Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1428 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261891609
MGI SNP Detail		 Chr6:4749007 Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1555 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs30364470
MGI SNP Detail		 Chr6:4749299 Peg10 within coordinates of
Rr146220 within coordinates of
Tssr1773 1847 bp downstream
 SNP C/T T C T T C
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Showing SNP(s) 1 - 48 of 48
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/17/2024
MGI 6.24 		The Jackson Laboratory
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