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Mouse SNP Summary
Symbol
Name
ID 		Tssr1908
transcription start site region 1908
MGI:5929675

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229604725
MGI SNP Detail		 Chr6:83482070 Dguok within coordinates of
Tssr1908 1993 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30568886
MGI SNP Detail		 Chr6:83482116 Dguok within coordinates of
Tssr1908 1947 bp upstream
 SNP A/G A A G A A
rs30314916
MGI SNP Detail		 Chr6:83482169 Dguok within coordinates of
Tssr1908 1894 bp upstream
 SNP C/T C C T C C
rs225857155
MGI SNP Detail		 Chr6:83482172 Dguok within coordinates of
Tssr1908 1891 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs50165812
MGI SNP Detail		 Chr6:83482209 Dguok within coordinates of
Tssr1908 1854 bp upstream
 SNP A/T A T A
rs48069337
MGI SNP Detail		 Chr6:83482261 Dguok within coordinates of
Tssr1908 1802 bp upstream
 SNP A/G A G A
rs212001984
MGI SNP Detail		 Chr6:83482307 Dguok within coordinates of
Tssr1908 1756 bp upstream
 SNP C/T T T T C T T C C C C T T T T T T C C T T T C T T T C C C C C T T C C C C C C C T C C C T T C C T C T C C C
rs50371645
MGI SNP Detail		 Chr6:83482322 Dguok within coordinates of
Tssr1908 1741 bp upstream
 SNP C/T C T C
rs48772616
MGI SNP Detail		 Chr6:83482336 Dguok within coordinates of
Tssr1908 1727 bp upstream
 SNP A/G G A G
rs214576660
MGI SNP Detail		 Chr6:83482418 Dguok within coordinates of
Tssr1908 1645 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C T T C C T C C C C C C C C C C C C
rs234204989
MGI SNP Detail		 Chr6:83482438 Dguok within coordinates of
Tssr1908 1625 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C T T T T C T T C C T T C T T T T T T T T T T T T
rs253761721
MGI SNP Detail		 Chr6:83482497 Dguok within coordinates of
Tssr1908 1566 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581191444
MGI SNP Detail		 Chr6:83482580 Dguok within coordinates of
Tssr1908 1483 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30568567
MGI SNP Detail		 Chr6:83482648 Dguok within coordinates of
Tssr1908 1415 bp upstream
 SNP A/C C A A A
rs248388171
MGI SNP Detail		 Chr6:83482665 Dguok within coordinates of
Tssr1908 1398 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36630400
MGI SNP Detail		 Chr6:83482702 Dguok within coordinates of
Tssr1908 1361 bp upstream
 SNP C/T C T C T C C C C T T T T T T T
rs584064393
MGI SNP Detail		 Chr6:83482729 Dguok within coordinates of
Tssr1908 1334 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs38097940
MGI SNP Detail		 Chr6:83482809 Dguok within coordinates of
Tssr1908 1254 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs246288941
MGI SNP Detail		 Chr6:83483033 Dguok within coordinates of
Tssr1908 1030 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587500065
MGI SNP Detail		 Chr6:83483232 Dguok within coordinates of
Tssr1908 831 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256574493
MGI SNP Detail		 Chr6:83483241 Dguok within coordinates of
Tssr1908 822 bp upstream
Tssr61663 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G
rs227087274
MGI SNP Detail		 Chr6:83483301 Dguok within coordinates of
Tssr1908 762 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239042032
MGI SNP Detail		 Chr6:83483411 Dguok within coordinates of
Tssr1908 652 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257840058
MGI SNP Detail		 Chr6:83483443 Dguok within coordinates of
Tssr1908 620 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233718784
MGI SNP Detail		 Chr6:83483591 Cpgi17605 within coordinates of
Dguok within coordinates of
Tssr1908 472 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254351960
MGI SNP Detail		 Chr6:83483607 Cpgi17605 within coordinates of
Dguok within coordinates of
Tssr1908 456 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38075169
MGI SNP Detail		 Chr6:83483845 Cpgi17605 within coordinates of
Dguok within coordinates of
Tssr1908 218 bp upstream
 SNP A/T A A A A A A A A A T T A A A A
rs38629602
MGI SNP Detail		 Chr6:83483925 Cpgi17605 within coordinates of
Rr399724 within coordinates of
Tssr1908 138 bp upstream
 SNP A/G A A A A A A G A A G G A A G A
rs244879513
MGI SNP Detail		 Chr6:83483981 Cpgi17605 within coordinates of
Rr399724 within coordinates of
Tssr1908 82 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T T G G G T G G T T G G G G G G G G G G G G G G
rs36593041
MGI SNP Detail		 Chr6:83483988 Cpgi17605 within coordinates of
Rr399724 within coordinates of
Tssr1908 75 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs580817222
MGI SNP Detail		 Chr6:83483996 Cpgi17605 within coordinates of
Rr399724 within coordinates of
Tssr1908 67 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30121741
MGI SNP Detail		 Chr6:83484054 Cpgi17605 within coordinates of
Rr399724 within coordinates of
Tssr1908 9 bp upstream
 SNP A/G G A A A
rs36947817
MGI SNP Detail		 Chr6:83484146 Cpgi17605 within coordinates of
Rr399724 within coordinates of
Tssr1908 58 bp downstream
 SNP C/T C C C C C C C C T T C C T C
rs218240709
MGI SNP Detail		 Chr6:83484241 Cpgi17605 within coordinates of
Tssr1908 153 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243157436
MGI SNP Detail		 Chr6:83484356 Cpgi17605 within coordinates of
Tssr1908 268 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255521578
MGI SNP Detail		 Chr6:83484366 Cpgi17605 within coordinates of
Tssr1908 278 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221559755
MGI SNP Detail		 Chr6:83484459 Tssr1908 371 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243674648
MGI SNP Detail		 Chr6:83484465 Tssr1908 377 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36514564
MGI SNP Detail		 Chr6:83484619 Tssr1908 531 bp downstream
 SNP A/G G G G G G G G G G A A G G A G
rs221038053
MGI SNP Detail		 Chr6:83484719 Tssr1908 631 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30314098
MGI SNP Detail		 Chr6:83484730 Tssr1908 642 bp downstream
 SNP A/T T T A T A A T T T T A T T A A T A
rs257877521
MGI SNP Detail		 Chr6:83484750 Tssr1908 662 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232880596
MGI SNP Detail		 Chr6:83484758 Tssr1908 670 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs38250895
MGI SNP Detail		 Chr6:83484815 Tssr1908 727 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs261217371
MGI SNP Detail		 Chr6:83484828 Tssr1908 740 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228837684
MGI SNP Detail		 Chr6:83484834 Tssr1908 746 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36870532
MGI SNP Detail		 Chr6:83484848 Tssr1908 760 bp downstream
 SNP A/C A A A A A A C A A C C A A C A
rs36389502
MGI SNP Detail		 Chr6:83484855 Tssr1908 767 bp downstream
 SNP C/T C C C C C C C C C T C C C C
rs227245644
MGI SNP Detail		 Chr6:83484884 Tssr1908 796 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247109881
MGI SNP Detail		 Chr6:83484915 Tssr1908 827 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218332784
MGI SNP Detail		 Chr6:83484923 Tssr1908 835 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240444667
MGI SNP Detail		 Chr6:83484931 Tssr1908 843 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252940434
MGI SNP Detail		 Chr6:83485042 Tssr1908 954 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212947672
MGI SNP Detail		 Chr6:83485098 Tssr1908 1010 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A G G A A G A A A A A A A G A A A A
rs38076237
MGI SNP Detail		 Chr6:83485207 Tssr1908 1119 bp downstream
 SNP A/C C C C C C C A C C A A C C A C
rs250872003
MGI SNP Detail		 Chr6:83485421 Tssr1908 1333 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A A C C C C A C C A A C C A C C C C C C C C C C C C
rs221069495
MGI SNP Detail		 Chr6:83485424 Tssr1908 1336 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233830451
MGI SNP Detail		 Chr6:83485440 Tssr1908 1352 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260454217
MGI SNP Detail		 Chr6:83485478 Tssr1908 1390 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578406056
MGI SNP Detail		 Chr6:83485510 Tssr1908 1422 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581062424
MGI SNP Detail		 Chr6:83485522 Tssr1908 1434 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C T C C T T C C T C C C C C C C C C C C C
rs584417637
MGI SNP Detail		 Chr6:83485544 Tssr1908 1456 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T T G G G G T G G T T G G T G G G G G G G G G G G G
rs225935361
MGI SNP Detail		 Chr6:83485547 Tssr1908 1459 bp downstream
 SNP A/G A A A G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G G
rs248167443
MGI SNP Detail		 Chr6:83485588 Tssr1908 1500 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C T T C C T C C C C C C C C C C C C
rs264536908
MGI SNP Detail		 Chr6:83485615 Tssr1908 1527 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A G G A A G A A A A A A A G A A A A
rs578963650
MGI SNP Detail		 Chr6:83485636 Tssr1908 1548 bp downstream
 SNP A/T A A A T T T T T T T T T T T T T T T A T T T T T T A A T T A T A T T A A T T A A T T T T A T T T
rs221096655
MGI SNP Detail		 Chr6:83485730 Tssr1908 1642 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238512326
MGI SNP Detail		 Chr6:83485852 Tssr1908 1764 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258323643
MGI SNP Detail		 Chr6:83485868 Tssr1908 1780 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T T G G G G T G G T T G G T G G G G G G G G G G G G
rs227277938
MGI SNP Detail		 Chr6:83485901 Tssr1908 1813 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247143028
MGI SNP Detail		 Chr6:83485956 Tssr1908 1868 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263979851
MGI SNP Detail		 Chr6:83485957 Tssr1908 1869 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234829505
MGI SNP Detail		 Chr6:83485963 Tssr1908 1875 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249300394
MGI SNP Detail		 Chr6:83485967 Tssr1908 1879 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30952329
MGI SNP Detail		 Chr6:83485976 Tssr1908 1888 bp downstream
 SNP A/T A T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231504805
MGI SNP Detail		 Chr6:83486034 Tssr1908 1946 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244595669
MGI SNP Detail		 Chr6:83486083 Tssr1908 1995 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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