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Mouse SNP Summary
Symbol
Name
ID 		Tssr2119
transcription start site region 2119
MGI:5929886

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3726844
MGI SNP Detail		 Chr7:19428782 Tssr2119 1983 bp downstream
 SNP C/T C T T T C C T C T T T C C C C T
rs248389711
MGI SNP Detail		 Chr7:19428838 Tssr2119 1927 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216263178
MGI SNP Detail		 Chr7:19429024 Tssr2119 1741 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237988292
MGI SNP Detail		 Chr7:19429055 Tssr2119 1710 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262482810
MGI SNP Detail		 Chr7:19429164 Tssr2119 1601 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222782449
MGI SNP Detail		 Chr7:19429213 Tssr2119 1552 bp downstream
 SNP G/T T T T G G G G G T G T G G G G G G G G T G T G G G G T G G G T G T T G T G T G T G G T G G T G G G G G G
rs32422496
MGI SNP Detail		 Chr7:19429237 Tssr2119 1528 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs32024003
MGI SNP Detail		 Chr7:19429414 Tssr2119 1351 bp downstream
 SNP C/G G C C C G G C G C C G
rs31482598
MGI SNP Detail		 Chr7:19429456 Tssr2119 1309 bp downstream
 SNP C/G G G C G C G G C G G G G G G G G G G G
rs217866497
MGI SNP Detail		 Chr7:19429472 Tssr2119 1293 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579494380
MGI SNP Detail		 Chr7:19429506 Tssr2119 1259 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32422500
MGI SNP Detail		 Chr7:19429528 Tssr2119 1237 bp downstream
 SNP A/G G A G A G G G G G G G G G G G G G
rs252629561
MGI SNP Detail		 Chr7:19429593 Tssr2119 1172 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225149835
MGI SNP Detail		 Chr7:19429672 Tssr2119 1093 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244834681
MGI SNP Detail		 Chr7:19429697 Tssr2119 1068 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581976597
MGI SNP Detail		 Chr7:19429736 Tssr2119 1029 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265196496
MGI SNP Detail		 Chr7:19429779 Tssr2119 986 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585977080
MGI SNP Detail		 Chr7:19429821 Tssr2119 944 bp downstream
 SNP C/G C G G G G G C G C G G G G G G G G C G G G G G G C G G G C G G C G C G C G G G G C G G C G G G G G G
rs229370379
MGI SNP Detail		 Chr7:19429834 Tssr2119 931 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237851371
MGI SNP Detail		 Chr7:19429889 Tssr2119 876 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255790904
MGI SNP Detail		 Chr7:19429903 Tssr2119 862 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229493793
MGI SNP Detail		 Chr7:19429907 Tssr2119 858 bp downstream
 SNP A/T T T A A A A A T A T A A A A A A A A T A T A A A A T A A A T A T T A T A T A T A A T A A T A A A A A A
rs248254944
MGI SNP Detail		 Chr7:19429909 Tssr2119 856 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232570468
MGI SNP Detail		 Chr7:19429980 Tssr2119 785 bp downstream
 SNP A/G G G G G G A G A G G G G G G G A G A G G G G A G G G A G A A G A G A G A G G A G G A G G G G
rs587230273
MGI SNP Detail		 Chr7:19429995 Tssr2119 770 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579835451
MGI SNP Detail		 Chr7:19430012 Rr155346 within coordinates of
Tssr2119 753 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583387074
MGI SNP Detail		 Chr7:19430023 Rr155346 within coordinates of
Tssr2119 742 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587006147
MGI SNP Detail		 Chr7:19430047 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 718 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251637003
MGI SNP Detail		 Chr7:19430081 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 684 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214298787
MGI SNP Detail		 Chr7:19430157 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 608 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32422502
MGI SNP Detail		 Chr7:19430251 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 514 bp downstream
Tssr64881 within coordinates of
Tssr70973 within coordinates of
 SNP A/G G A A A G G A A A G G G A
rs248348952
MGI SNP Detail		 Chr7:19430283 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 482 bp downstream
Tssr70974 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584362425
MGI SNP Detail		 Chr7:19430317 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 448 bp downstream
Tssr64882 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217423654
MGI SNP Detail		 Chr7:19430322 Apoe within coordinates of
Rr155346 within coordinates of
Tssr2119 443 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6252328
MGI SNP Detail		 Chr7:19430635 Apoe within coordinates of
Cpgi18507 within coordinates of
Rr167194 within coordinates of
Tssr2116 within coordinates of
Tssr2119 130 bp downstream
 SNP A/G G A A A G A G G A A G G A
rs252532901
MGI SNP Detail		 Chr7:19430680 Apoe within coordinates of
Cpgi18507 within coordinates of
Rr167194 within coordinates of
Tssr2117 within coordinates of
Tssr2119 85 bp downstream
Tssr70988 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13463654
MGI SNP Detail		 Chr7:19430752 Apoe within coordinates of
Cpgi18507 within coordinates of
Rr167194 within coordinates of
Tssr2119 13 bp downstream
 SNP G/T G G T G G G G T T G G G G G T
rs13463662
MGI SNP Detail		 Chr7:19430962 Apoe within coordinates of
Cpgi18507 within coordinates of
Rr167194 within coordinates of
Tssr2119 196 bp upstream
Tssr64893 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579057030
MGI SNP Detail		 Chr7:19431121 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 355 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs257796922
MGI SNP Detail		 Chr7:19431228 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 462 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221727012
MGI SNP Detail		 Chr7:19431247 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 481 bp upstream
 SNP C/G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T G T T T T T T T T T T T T T C T T T T
rs237711936
MGI SNP Detail		 Chr7:19431295 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 529 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255846414
MGI SNP Detail		 Chr7:19431338 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 572 bp upstream
 SNP G/T T T T G G G G G T G T T G G G G G G G T T G T G G G G T G G T G T T G T G T G T G G T G G T T G G G G
rs229012447
MGI SNP Detail		 Chr7:19431378 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 612 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs242303724
MGI SNP Detail		 Chr7:19431578 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 812 bp upstream
Tssr71004 within coordinates of
 SNP A/T A A A T T T T T A T A A T T T T T T T T A T A T T T T A T T T A T A A T A T A T A T T A T T A A T T T T
rs265785350
MGI SNP Detail		 Chr7:19431615 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 849 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231857383
MGI SNP Detail		 Chr7:19431629 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 863 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256734569
MGI SNP Detail		 Chr7:19431701 Apoe within coordinates of
D7Mit57 within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 935 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214232185
MGI SNP Detail		 Chr7:19431829 Apoe within coordinates of
D7Mit57 within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1063 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224503534
MGI SNP Detail		 Chr7:19431845 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1079 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242371385
MGI SNP Detail		 Chr7:19431846 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1080 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217465390
MGI SNP Detail		 Chr7:19431863 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1097 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234528196
MGI SNP Detail		 Chr7:19431878 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1112 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259592488
MGI SNP Detail		 Chr7:19431900 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1134 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31678592
MGI SNP Detail		 Chr7:19432031 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1265 bp upstream
 SNP A/G G G A A A G G A G A A A G G G G A
rs582661799
MGI SNP Detail		 Chr7:19432214 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1448 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs8252878
MGI SNP Detail		 Chr7:19432252 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1486 bp upstream
 SNP A/G G G A A A A A A G A G A A G G G
rs8252877
MGI SNP Detail		 Chr7:19432318 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1552 bp upstream
Tssr71011 within coordinates of
 SNP A/C C C C C C C C C C C C A C C C C C C C C C C C C
rs32423368
MGI SNP Detail		 Chr7:19432550 Apoe within coordinates of
Cpgi18508 within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1784 bp upstream
 SNP C/T C T T T C C C T T C C C C T
rs32423370
MGI SNP Detail		 Chr7:19432664 Apoe within coordinates of
Cpgi18508 within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1898 bp upstream
 SNP C/T T C C C T T C C C C T T T T C
rs32423372
MGI SNP Detail		 Chr7:19432690 Apoe within coordinates of
Cpgi18508 within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1924 bp upstream
 SNP C/T C T T T C C C T T T C C C C T
rs32424374
MGI SNP Detail		 Chr7:19432707 Apoe within coordinates of
Cpgi18508 within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1941 bp upstream
 SNP C/T T T C C C T T T C C C T T T T C
rs581765339
MGI SNP Detail		 Chr7:19432755 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1989 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585472850
MGI SNP Detail		 Chr7:19432759 Apoe within coordinates of
Gm71725 within coordinates of
Rr167194 within coordinates of
Tssr2119 1993 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 64 of 64
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory