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Mouse SNP Summary
Symbol
Name
ID 		Tssr2946
transcription start site region 2946
MGI:5930713

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29744667
MGI SNP Detail		 Chr9:78238610 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1977 bp upstream
 SNP C/T T C C C T C T T C C C T C T T
rs219921982
MGI SNP Detail		 Chr9:78238627 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1960 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240083215
MGI SNP Detail		 Chr9:78238628 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1959 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs6304518
MGI SNP Detail		 Chr9:78238631 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1956 bp upstream
 SNP C/T T T T T T T T C C T T T C T C C T
rs580569543
MGI SNP Detail		 Chr9:78238741 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1846 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6305082
MGI SNP Detail		 Chr9:78238766 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1821 bp upstream
 SNP A/G G A
rs6305136
MGI SNP Detail		 Chr9:78238790 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1797 bp upstream
 SNP G/T T G G G T G T G G G G G G G G G G G G
rs582823594
MGI SNP Detail		 Chr9:78238802 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1785 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586171669
MGI SNP Detail		 Chr9:78238893 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1694 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247641441
MGI SNP Detail		 Chr9:78238910 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1677 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579957408
MGI SNP Detail		 Chr9:78238916 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1671 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G G G G A A G A A A G G A A A A A G A A A A G A G A A A A A A A G A A A A
rs583423325
MGI SNP Detail		 Chr9:78238917 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1670 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586474065
MGI SNP Detail		 Chr9:78238935 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1652 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266173642
MGI SNP Detail		 Chr9:78238936 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1651 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G G G A A A G A A A G G A A A A A G A A A A G A G A A A A A A A G A A A A
rs50258077
MGI SNP Detail		 Chr9:78238995 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1592 bp upstream
 SNP A/T A A A A A A A A A A T A T T A
rs242994942
MGI SNP Detail		 Chr9:78239009 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1578 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs49290153
MGI SNP Detail		 Chr9:78239139 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1448 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs8257503
MGI SNP Detail		 Chr9:78239204 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1383 bp upstream
 SNP C/G C C C C G
rs48790393
MGI SNP Detail		 Chr9:78239247 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1340 bp upstream
 SNP G/T G G G G G G G G G G G T T G
rs49801201
MGI SNP Detail		 Chr9:78239308 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1279 bp upstream
 SNP C/T T T T T T T C T T T C T C C T
rs216315036
MGI SNP Detail		 Chr9:78239316 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1271 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G A A G G G G G G A G G G G G A G G G G G G G G G G G G G G G G
rs241643039
MGI SNP Detail		 Chr9:78239332 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1255 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254495682
MGI SNP Detail		 Chr9:78239333 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1254 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29987330
MGI SNP Detail		 Chr9:78239361 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1226 bp upstream
 SNP A/G A G A G
rs33662980
MGI SNP Detail		 Chr9:78239362 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1225 bp upstream
 SNP A/G G A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578393496
MGI SNP Detail		 Chr9:78239388 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1199 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582861900
MGI SNP Detail		 Chr9:78239398 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1189 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227516941
MGI SNP Detail		 Chr9:78239407 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1180 bp upstream
 SNP A/G G A
rs585883219
MGI SNP Detail		 Chr9:78239423 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1164 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48726955
MGI SNP Detail		 Chr9:78239431 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1156 bp upstream
 SNP C/G C C C C C C G C C C G C G G C
rs580202187
MGI SNP Detail		 Chr9:78239515 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1072 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G
rs33621611
MGI SNP Detail		 Chr9:78239518 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1069 bp upstream
 SNP A/T T T A A A T A T A A A A A A A T A A
rs582426165
MGI SNP Detail		 Chr9:78239570 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 1017 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585993055
MGI SNP Detail		 Chr9:78239604 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 983 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580065178
MGI SNP Detail		 Chr9:78239619 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 968 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs583435955
MGI SNP Detail		 Chr9:78239626 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 961 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586657022
MGI SNP Detail		 Chr9:78239627 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 960 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T C C C C T T C T T T C C T T T T T C T T T T C T C T T C T T C T T T T
rs579451179
MGI SNP Detail		 Chr9:78239655 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 932 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584009306
MGI SNP Detail		 Chr9:78239698 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 889 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs587031459
MGI SNP Detail		 Chr9:78239722 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 865 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs581540012
MGI SNP Detail		 Chr9:78239736 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 851 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584697741
MGI SNP Detail		 Chr9:78239790 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 797 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587320663
MGI SNP Detail		 Chr9:78239806 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 781 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A C C C A A A C A A A C C A A A A A C A A A A C A C A A A A A A A C A A A A
rs581205678
MGI SNP Detail		 Chr9:78239833 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 754 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs584508418
MGI SNP Detail		 Chr9:78239841 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 746 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578433236
MGI SNP Detail		 Chr9:78239842 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 745 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581873560
MGI SNP Detail		 Chr9:78239859 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 728 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584177438
MGI SNP Detail		 Chr9:78239889 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 698 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579346288
MGI SNP Detail		 Chr9:78239891 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 696 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254615803
MGI SNP Detail		 Chr9:78239916 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 671 bp upstream
 SNP C/T C C C T T C T T C T T T C C C C T T T T T T T T C T C T T T T T T T T C T T T C T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582751297
MGI SNP Detail		 Chr9:78239920 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 667 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585822440
MGI SNP Detail		 Chr9:78239951 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 636 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578836648
MGI SNP Detail		 Chr9:78239962 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 625 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582304028
MGI SNP Detail		 Chr9:78239969 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 618 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30184683
MGI SNP Detail		 Chr9:78239975 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 612 bp upstream
 SNP G/T G T T G
rs585696207
MGI SNP Detail		 Chr9:78239999 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 588 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs579730391
MGI SNP Detail		 Chr9:78240062 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 525 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs108700752
MGI SNP Detail		 Chr9:78240065 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 522 bp upstream
 SNP T T
rs108746280
MGI SNP Detail		 Chr9:78240087 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 500 bp upstream
 SNP A A
rs583001729
MGI SNP Detail		 Chr9:78240097 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 490 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs108524899
MGI SNP Detail		 Chr9:78240147 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 440 bp upstream
 SNP G G
rs8255654
MGI SNP Detail		 Chr9:78240161 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 426 bp upstream
 SNP C/T T T C C C C C T C T T C C C C C T T C
rs8255655
MGI SNP Detail		 Chr9:78240210 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 377 bp upstream
 SNP A/T T T T T T T T T T T T A T T T T T T T T T T T T T
rs585399445
MGI SNP Detail		 Chr9:78240215 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 372 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs16799404
MGI SNP Detail		 Chr9:78240224 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 363 bp upstream
 SNP C/G G G G G G G G G G G G C G G G G G C G G C C C G G
rs8255656
MGI SNP Detail		 Chr9:78240236 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 351 bp upstream
 SNP G/T G G G G G G G G G G G T G G G G G T G G T T T G G
rs8255657
MGI SNP Detail		 Chr9:78240251 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 336 bp upstream
 SNP C/T C C C C C C C C C T C C C C T C
rs8255658
MGI SNP Detail		 Chr9:78240258 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 329 bp upstream
 SNP C/T T C C C T C C C T T C C T C C T T
rs8255659
MGI SNP Detail		 Chr9:78240264 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 323 bp upstream
 SNP C/T C C C C C C C C T C C C C C C
rs580497861
MGI SNP Detail		 Chr9:78240380 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 207 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs8255640
MGI SNP Detail		 Chr9:78240482 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 105 bp upstream
 SNP A/G G G G G G G G G G G G A G G G G G G G G G G G G G
rs51385820
MGI SNP Detail		 Chr9:78240531 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 56 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs583949343
MGI SNP Detail		 Chr9:78240564 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 23 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587348749
MGI SNP Detail		 Chr9:78240565 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 22 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581242008
MGI SNP Detail		 Chr9:78240566 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 21 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583526927
MGI SNP Detail		 Chr9:78240570 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 17 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs8255641
MGI SNP Detail		 Chr9:78240621 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 32 bp downstream
 SNP A/T A A A A A A A A A T A A A A A A A T
rs8255642
MGI SNP Detail		 Chr9:78240622 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 33 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T C
rs8255643
MGI SNP Detail		 Chr9:78240628 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 39 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T C
rs8255644
MGI SNP Detail		 Chr9:78240631 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 42 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T
rs16799403
MGI SNP Detail		 Chr9:78240658 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 69 bp downstream
 SNP C/T T T C C C T C C T C T T C C C C T T C C T T T C
rs585410934
MGI SNP Detail		 Chr9:78240663 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 74 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs8255645
MGI SNP Detail		 Chr9:78240669 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 80 bp downstream
 SNP A/T A A T T T A T A T A A T T T A A T A A A A
rs233094102
MGI SNP Detail		 Chr9:78240705 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 116 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs16798599
MGI SNP Detail		 Chr9:78240723 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 134 bp downstream
 SNP A/G A A A A A A A A A A A G A A A A A G A A A G G G A A A
rs578404128
MGI SNP Detail		 Chr9:78240763 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 174 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs581506962
MGI SNP Detail		 Chr9:78240773 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 184 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8257480
MGI SNP Detail		 Chr9:78240793 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 204 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G T
rs8257481
MGI SNP Detail		 Chr9:78240795 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 206 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T G
rs16798602
MGI SNP Detail		 Chr9:78240815 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 226 bp downstream
 SNP A/G A G G G A G G G ? ? G G G G G G A
rs8257482
MGI SNP Detail		 Chr9:78240823 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 234 bp downstream
 SNP C/T C C C C C C C C C C C C C C T
rs585010035
MGI SNP Detail		 Chr9:78240835 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 246 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs8257484
MGI SNP Detail		 Chr9:78240836 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 247 bp downstream
 SNP A/T T A A T T A A ? ? ? T A A A ? T
rs8257485
MGI SNP Detail		 Chr9:78240844 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 255 bp downstream
 SNP A/G G G ? G A G G G ? ? ? A G G G ? A
rs8257486
MGI SNP Detail		 Chr9:78240851 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 262 bp downstream
 SNP G/T T T T T T T T T T T T T T T G
rs8257487
MGI SNP Detail		 Chr9:78240858 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 269 bp downstream
 SNP A/G A A A A A A A A A A A A A G
rs213923742
MGI SNP Detail		 Chr9:78240915 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 326 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582494622
MGI SNP Detail		 Chr9:78241068 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 479 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs8257488
MGI SNP Detail		 Chr9:78241079 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 490 bp downstream
 SNP A/G A A A A A G A A G A
rs8257489
MGI SNP Detail		 Chr9:78241171 Gm70238 within coordinates of
Gsta2 within coordinates of
Tssr2946 582 bp downstream
 SNP A/T A A A A A T A A A T A
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Showing SNP(s) 1 - 100 of 166
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory