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Mouse SNP Summary
Symbol
Name
ID 		Tssr3902
transcription start site region 3902
MGI:5931669

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254295037
MGI SNP Detail		 Chr12:86878544 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1993 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs234088714
MGI SNP Detail		 Chr12:86878604 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1933 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs254686019
MGI SNP Detail		 Chr12:86878702 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1835 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265481492
MGI SNP Detail		 Chr12:86878904 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1633 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232268451
MGI SNP Detail		 Chr12:86878925 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1612 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244835539
MGI SNP Detail		 Chr12:86878985 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1552 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs387891194
MGI SNP Detail		 Chr12:86879018 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1519 bp downstream
 SNP A/C A A A A A A A A A C A A A A A A A A A A A A A A A C A A A A A A A A A C A A A A A A A A A A C A A
rs213837630
MGI SNP Detail		 Chr12:86879020 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1517 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs47259571
MGI SNP Detail		 Chr12:86879047 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1490 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs243625817
MGI SNP Detail		 Chr12:86879068 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1469 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212886023
MGI SNP Detail		 Chr12:86879071 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1466 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46217675
MGI SNP Detail		 Chr12:86879105 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1432 bp downstream
 SNP A/C C C C C C C A C C C A C C A C
rs261171703
MGI SNP Detail		 Chr12:86879184 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1353 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224623134
MGI SNP Detail		 Chr12:86879187 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1350 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238960220
MGI SNP Detail		 Chr12:86879236 Cpgi4924 within coordinates of
Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1301 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249948942
MGI SNP Detail		 Chr12:86879321 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1216 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219886281
MGI SNP Detail		 Chr12:86879399 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1138 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs50459731
MGI SNP Detail		 Chr12:86879421 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1116 bp downstream
 SNP A/G A A A A A A G A G A G G A G A
rs254382097
MGI SNP Detail		 Chr12:86879518 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1019 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G C G C
rs225428754
MGI SNP Detail		 Chr12:86879572 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 965 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250720316
MGI SNP Detail		 Chr12:86879589 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 948 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263167101
MGI SNP Detail		 Chr12:86879597 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 940 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233023885
MGI SNP Detail		 Chr12:86879601 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 936 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244888502
MGI SNP Detail		 Chr12:86879666 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 871 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45965058
MGI SNP Detail		 Chr12:86879691 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 846 bp downstream
 SNP C/T T T T T T T T T C T C C T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585727937
MGI SNP Detail		 Chr12:86879739 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 798 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578824221
MGI SNP Detail		 Chr12:86879766 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 771 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226751753
MGI SNP Detail		 Chr12:86879850 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 687 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243688364
MGI SNP Detail		 Chr12:86879881 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 656 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213399555
MGI SNP Detail		 Chr12:86879975 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 562 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46708689
MGI SNP Detail		 Chr12:86880010 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 527 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs260238451
MGI SNP Detail		 Chr12:86880083 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 454 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs216200726
MGI SNP Detail		 Chr12:86880099 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 438 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233876999
MGI SNP Detail		 Chr12:86880112 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 425 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250013668
MGI SNP Detail		 Chr12:86880113 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 424 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220257301
MGI SNP Detail		 Chr12:86880145 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 392 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs387133469
MGI SNP Detail		 Chr12:86880180 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 357 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C C C C T C C C
rs229791921
MGI SNP Detail		 Chr12:86880181 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 356 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256059224
MGI SNP Detail		 Chr12:86880209 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 328 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs49521558
MGI SNP Detail		 Chr12:86880210 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 327 bp downstream
 SNP C/T T T T T T T C T C T C C T C T
rs248059717
MGI SNP Detail		 Chr12:86880260 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 277 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262696226
MGI SNP Detail		 Chr12:86880335 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 202 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224983298
MGI SNP Detail		 Chr12:86880380 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 157 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238810419
MGI SNP Detail		 Chr12:86880436 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 101 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs585717312
MGI SNP Detail		 Chr12:86880455 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 82 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs258262773
MGI SNP Detail		 Chr12:86880512 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 25 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs47016778
MGI SNP Detail		 Chr12:86880523 Gm40491 within coordinates of
Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 14 bp downstream
 SNP A/T T T T T T T T T T T A T T A T
rs237902265
MGI SNP Detail		 Chr12:86880587 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 15 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262035293
MGI SNP Detail		 Chr12:86880607 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 35 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234255456
MGI SNP Detail		 Chr12:86880732 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 160 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254793703
MGI SNP Detail		 Chr12:86880790 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 218 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs580287162
MGI SNP Detail		 Chr12:86880804 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 232 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50178039
MGI SNP Detail		 Chr12:86880824 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 252 bp upstream
 SNP A A A
rs583810952
MGI SNP Detail		 Chr12:86880962 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 390 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs585326886
MGI SNP Detail		 Chr12:86881000 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 428 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs227928632
MGI SNP Detail		 Chr12:86881011 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 439 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T T T T T T T A T T T T
rs244170555
MGI SNP Detail		 Chr12:86881064 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 492 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214732722
MGI SNP Detail		 Chr12:86881091 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 519 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs230248788
MGI SNP Detail		 Chr12:86881113 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 541 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261698579
MGI SNP Detail		 Chr12:86881127 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 555 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217703355
MGI SNP Detail		 Chr12:86881162 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 590 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47334560
MGI SNP Detail		 Chr12:86881171 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 599 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs51697569
MGI SNP Detail		 Chr12:86881216 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 644 bp upstream
 SNP A/G A A A A A G A A A G A A G A
rs221481176
MGI SNP Detail		 Chr12:86881243 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 671 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs46885145
MGI SNP Detail		 Chr12:86881255 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 683 bp upstream
 SNP A/T A A A A A A T A A A A A A
rs252040909
MGI SNP Detail		 Chr12:86881291 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 719 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs50857140
MGI SNP Detail		 Chr12:86881334 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 762 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs237963350
MGI SNP Detail		 Chr12:86881349 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr117129 within coordinates of
Tssr3902 777 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs265882533
MGI SNP Detail		 Chr12:86881366 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr117129 within coordinates of
Tssr3902 794 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233311047
MGI SNP Detail		 Chr12:86881441 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 869 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251587154
MGI SNP Detail		 Chr12:86881443 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 871 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263241493
MGI SNP Detail		 Chr12:86881452 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 880 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs227649312
MGI SNP Detail		 Chr12:86881453 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 881 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243856497
MGI SNP Detail		 Chr12:86881543 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 971 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs214797389
MGI SNP Detail		 Chr12:86881556 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 984 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223810865
MGI SNP Detail		 Chr12:86881558 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 986 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250198118
MGI SNP Detail		 Chr12:86881560 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 988 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T
rs218416218
MGI SNP Detail		 Chr12:86881562 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 990 bp upstream
 SNP A/T T T T T T T T T A T T T T T T T T T T T T T A T T T T T A T T T T T T T T T T A A T A
rs579540985
MGI SNP Detail		 Chr12:86881573 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1001 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583236954
MGI SNP Detail		 Chr12:86881574 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1002 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587042361
MGI SNP Detail		 Chr12:86881576 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1004 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581099146
MGI SNP Detail		 Chr12:86881577 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1005 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240128378
MGI SNP Detail		 Chr12:86881583 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1011 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262770094
MGI SNP Detail		 Chr12:86881595 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1023 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs215655139
MGI SNP Detail		 Chr12:86881598 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1026 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs583538631
MGI SNP Detail		 Chr12:86881604 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1032 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs231275929
MGI SNP Detail		 Chr12:86881610 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1038 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251631896
MGI SNP Detail		 Chr12:86881612 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1040 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218148796
MGI SNP Detail		 Chr12:86881615 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1043 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs237224748
MGI SNP Detail		 Chr12:86881620 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1048 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260169176
MGI SNP Detail		 Chr12:86881639 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1067 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs226993778
MGI SNP Detail		 Chr12:86881642 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1070 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245000601
MGI SNP Detail		 Chr12:86881644 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1072 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs257426346
MGI SNP Detail		 Chr12:86881666 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1094 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs221534181
MGI SNP Detail		 Chr12:86881667 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1095 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237670403
MGI SNP Detail		 Chr12:86881698 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1126 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256378578
MGI SNP Detail		 Chr12:86881708 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1136 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223887113
MGI SNP Detail		 Chr12:86881722 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1150 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs254663423
MGI SNP Detail		 Chr12:86881771 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1199 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs264179656
MGI SNP Detail		 Chr12:86881780 Gm51955 within coordinates of
Gm56533 within coordinates of
Tssr3902 1208 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 100 of 124
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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