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Mouse SNP Summary
Symbol
Name
ID 		Tssr3954
transcription start site region 3954
MGI:5931721

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50746385
MGI SNP Detail		 Chr12:110949856 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1983 bp upstream
 SNP C/G C C C C C C G C C C C C C C C
rs227041441
MGI SNP Detail		 Chr12:110949942 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1897 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A G G A A A G G A A A A A A G G A A A A A A A A A A G
rs251878952
MGI SNP Detail		 Chr12:110949944 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1895 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214687477
MGI SNP Detail		 Chr12:110950091 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1748 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A A G G G A A G G G G G G A A G G G G G G A G G G A
rs235785755
MGI SNP Detail		 Chr12:110950145 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1694 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T G G T T T T G G T T T G G T T T T T T G G T T T T T T T T T T G
rs252824770
MGI SNP Detail		 Chr12:110950150 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1689 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C C A A A C C A A A A A A C C A A A A A A A A A A A
rs217460068
MGI SNP Detail		 Chr12:110950151 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1688 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235714520
MGI SNP Detail		 Chr12:110950153 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1686 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G A A G G G G G G A A G G G G G G G G G G G
rs253730979
MGI SNP Detail		 Chr12:110950168 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1671 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A A G G A A A G G A A A A A A G G A A A A A A A A A A
rs220919337
MGI SNP Detail		 Chr12:110950193 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1646 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238943172
MGI SNP Detail		 Chr12:110950203 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1636 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C C T T T C C T T T T T T C C T T T T T T C T T T C
rs47928438
MGI SNP Detail		 Chr12:110950212 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1627 bp upstream
 SNP A/G A A A A A A G A A A A A
rs51906939
MGI SNP Detail		 Chr12:110950214 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1625 bp upstream
 SNP C/T C C C C C C C C C T T C C T C
rs50776157
MGI SNP Detail		 Chr12:110950263 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1576 bp upstream
 SNP A/G G G G G G G G G G A A G G A G
rs48827956
MGI SNP Detail		 Chr12:110950314 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1525 bp upstream
 SNP A/G G G G G G G A G G A A G G A G
rs49028179
MGI SNP Detail		 Chr12:110950333 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1506 bp upstream
 SNP C/T C C C C C C T C C T T C C C C
rs239798583
MGI SNP Detail		 Chr12:110950408 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1431 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256924490
MGI SNP Detail		 Chr12:110950429 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1410 bp upstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G A G G G G A A G G G A A G G G G G G A A G G G G G G A G G G G
rs230686220
MGI SNP Detail		 Chr12:110950431 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1408 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G G A A A G G A A A A A A G G A A A A A A G A A A G
rs256657376
MGI SNP Detail		 Chr12:110950456 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1383 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs48084922
MGI SNP Detail		 Chr12:110950501 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1338 bp upstream
 SNP C/G C C C C C C C C C G G C C G C
rs229702205
MGI SNP Detail		 Chr12:110950518 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1321 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs217493336
MGI SNP Detail		 Chr12:110950579 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1260 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235564470
MGI SNP Detail		 Chr12:110950583 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 1256 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247302376
MGI SNP Detail		 Chr12:110950946 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 893 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215396408
MGI SNP Detail		 Chr12:110951042 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 797 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237152878
MGI SNP Detail		 Chr12:110951139 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 700 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225902288
MGI SNP Detail		 Chr12:110951153 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 686 bp upstream
 SNP A/G G A
rs212668068
MGI SNP Detail		 Chr12:110951154 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 685 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236218707
MGI SNP Detail		 Chr12:110951178 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 661 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T C C T T T T T T C C T T T T T T C T T T T
rs253116620
MGI SNP Detail		 Chr12:110951215 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 624 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T C C T T T T T T T C T T T T T T T T T T T
rs221755683
MGI SNP Detail		 Chr12:110951222 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 617 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239734833
MGI SNP Detail		 Chr12:110951230 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 609 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250928625
MGI SNP Detail		 Chr12:110951243 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 596 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs222904766
MGI SNP Detail		 Chr12:110951245 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 594 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47711311
MGI SNP Detail		 Chr12:110951288 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 551 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs228850849
MGI SNP Detail		 Chr12:110951311 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 528 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46824486
MGI SNP Detail		 Chr12:110951320 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 519 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs51101525
MGI SNP Detail		 Chr12:110951347 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 492 bp upstream
 SNP C/T T T T T T T C T T T C T T C T
rs231399854
MGI SNP Detail		 Chr12:110951478 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 361 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250851995
MGI SNP Detail		 Chr12:110951522 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 317 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs213107112
MGI SNP Detail		 Chr12:110951544 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 295 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234507116
MGI SNP Detail		 Chr12:110951588 Gm51959 within coordinates of
Rr259298 within coordinates of
Tssr3954 251 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs253072786
MGI SNP Detail		 Chr12:110951624 Gm51959 within coordinates of
Rr254698 within coordinates of
Tssr3954 215 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48730996
MGI SNP Detail		 Chr12:110951649 Gm51959 within coordinates of
Rr254698 within coordinates of
Tssr3954 190 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs233530299
MGI SNP Detail		 Chr12:110951724 Gm51959 within coordinates of
Rr254698 within coordinates of
Tssr3954 115 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250959517
MGI SNP Detail		 Chr12:110951730 Gm51959 within coordinates of
Rr254698 within coordinates of
Tssr3954 109 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222997842
MGI SNP Detail		 Chr12:110951738 Gm51959 within coordinates of
Rr254698 within coordinates of
Tssr3954 101 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245709032
MGI SNP Detail		 Chr12:110951754 Gm51959 within coordinates of
Rr254698 within coordinates of
Tssr3954 85 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs256011168
MGI SNP Detail		 Chr12:110951825 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 14 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219809115
MGI SNP Detail		 Chr12:110951836 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 3 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs46303154
MGI SNP Detail		 Chr12:110951982 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 131 bp downstream
 SNP A/C C C A C C C C C C C A C A A C C C
rs45862859
MGI SNP Detail		 Chr12:110951994 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 143 bp downstream
 SNP A/G A A A A A A G A A A A A A A A
rs228882837
MGI SNP Detail		 Chr12:110952002 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 151 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs241571698
MGI SNP Detail		 Chr12:110952005 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 154 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265529542
MGI SNP Detail		 Chr12:110952013 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 162 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48308498
MGI SNP Detail		 Chr12:110952062 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 211 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs50806500
MGI SNP Detail		 Chr12:110952076 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 225 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs213050956
MGI SNP Detail		 Chr12:110952126 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 275 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223638716
MGI SNP Detail		 Chr12:110952134 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 283 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47446087
MGI SNP Detail		 Chr12:110952157 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 306 bp downstream
 SNP C/T T T T T T T C T T T T T T C T
rs216541374
MGI SNP Detail		 Chr12:110952164 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 313 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs233574587
MGI SNP Detail		 Chr12:110952186 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 335 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs49710548
MGI SNP Detail		 Chr12:110952187 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 336 bp downstream
 SNP C/T T T T T T T C T T T T T T T
rs214768515
MGI SNP Detail		 Chr12:110952211 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 360 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51754031
MGI SNP Detail		 Chr12:110952213 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 362 bp downstream
 SNP A/G A A A A A A G A A A A A A G A
rs51859643
MGI SNP Detail		 Chr12:110952230 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 379 bp downstream
 SNP A/G A A A A A A G A A A A A A G A
rs50323688
MGI SNP Detail		 Chr12:110952262 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 411 bp downstream
 SNP A/C C C C C C C A C C C C C C C C
rs236139227
MGI SNP Detail		 Chr12:110952270 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 419 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51543895
MGI SNP Detail		 Chr12:110952275 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 424 bp downstream
 SNP C/T C C T C C C T C C C T C T T C C C
rs222936528
MGI SNP Detail		 Chr12:110952305 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 454 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241608003
MGI SNP Detail		 Chr12:110952308 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 457 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs52201340
MGI SNP Detail		 Chr12:110952319 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 468 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs52225452
MGI SNP Detail		 Chr12:110952348 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 497 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs52587267
MGI SNP Detail		 Chr12:110952438 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 587 bp downstream
 SNP A/G A A A A A A G A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264874814
MGI SNP Detail		 Chr12:110952613 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 762 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46058456
MGI SNP Detail		 Chr12:110952615 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 764 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs48511156
MGI SNP Detail		 Chr12:110952632 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 781 bp downstream
 SNP C/G C C C C C G C C C C C C C
rs258854035
MGI SNP Detail		 Chr12:110952676 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 825 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227415522
MGI SNP Detail		 Chr12:110952687 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 836 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G G A A A G G A A A A A A A G A A A A A A G A A A A
rs257089298
MGI SNP Detail		 Chr12:110952711 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 860 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G G A A A G G A A A A A A A G A A A A A A A A A A A
rs214789251
MGI SNP Detail		 Chr12:110952732 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 881 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238005091
MGI SNP Detail		 Chr12:110952733 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 882 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G G A A A G G A A A A A A A G A A A A A A G A A A A
rs249603552
MGI SNP Detail		 Chr12:110952735 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 884 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T T C C C T T C C C C C C C T C C C C C C C C C C C
rs211708772
MGI SNP Detail		 Chr12:110952752 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 901 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236177902
MGI SNP Detail		 Chr12:110952773 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 922 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T T G G G T T G G G G G G G T G G G G G G G G G G G
rs254095422
MGI SNP Detail		 Chr12:110952788 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 937 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222971427
MGI SNP Detail		 Chr12:110952797 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 946 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239004957
MGI SNP Detail		 Chr12:110952815 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 964 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263049791
MGI SNP Detail		 Chr12:110952826 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 975 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223838624
MGI SNP Detail		 Chr12:110952852 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1001 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T T C C C T T C C C C C C C T C C C C C C C C C C C
rs246372535
MGI SNP Detail		 Chr12:110952955 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1104 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G A A G G G G G G G A G G G G G G A G G G G
rs261988722
MGI SNP Detail		 Chr12:110952972 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1121 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217990418
MGI SNP Detail		 Chr12:110952995 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1144 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241741192
MGI SNP Detail		 Chr12:110953024 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1173 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259270780
MGI SNP Detail		 Chr12:110953066 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1215 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227734111
MGI SNP Detail		 Chr12:110953075 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1224 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs48242125
MGI SNP Detail		 Chr12:110953090 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1239 bp downstream
 SNP C/T C C C C C C C C C T T C C C C
rs50510464
MGI SNP Detail		 Chr12:110953146 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1295 bp downstream
 SNP A/C A A A A A A C A A A A A A A
rs51451259
MGI SNP Detail		 Chr12:110953158 Gm48630 within coordinates of
Gm51959 within coordinates of
Gm60603 within coordinates of
Tssr3954 1307 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
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Showing SNP(s) 1 - 100 of 127
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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