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Mouse SNP Summary
Symbol
Name
ID 		Tssr5584
transcription start site region 5584
MGI:5933351

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255850739
MGI SNP Detail		 ChrX:7276986 Tssr5584 1997 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229445050
MGI SNP Detail		 ChrX:7276996 Tssr5584 1987 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582011833
MGI SNP Detail		 ChrX:7277058 Tssr5584 1925 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33342202
MGI SNP Detail		 ChrX:7277085 Tssr5584 1898 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs217191467
MGI SNP Detail		 ChrX:7277160 Tssr5584 1823 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33343175
MGI SNP Detail		 ChrX:7277612 Tssr5584 1371 bp downstream
 SNP G/T G G G G G G G G G T G G T G
rs251903378
MGI SNP Detail		 ChrX:7277633 Tssr5584 1350 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213715482
MGI SNP Detail		 ChrX:7277636 Tssr5584 1347 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230813760
MGI SNP Detail		 ChrX:7277640 Tssr5584 1343 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248313875
MGI SNP Detail		 ChrX:7277675 Tssr5584 1308 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33343176
MGI SNP Detail		 ChrX:7277723 Tssr5584 1260 bp downstream
 SNP A/G A A A A A A A A A G A A G A
rs240157300
MGI SNP Detail		 ChrX:7277767 Tssr5584 1216 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs33343178
MGI SNP Detail		 ChrX:7277812 Tssr5584 1171 bp downstream
 SNP A/G G G G G G G A G G G G G G G
rs224896256
MGI SNP Detail		 ChrX:7278011 Tssr5584 972 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33343181
MGI SNP Detail		 ChrX:7278123 2010204K13Rik within coordinates of
Tssr5584 860 bp downstream
 SNP C/T T T C T T T C T T T C C C C
rs33343183
MGI SNP Detail		 ChrX:7278217 2010204K13Rik within coordinates of
Tssr5584 766 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs219275597
MGI SNP Detail		 ChrX:7278250 2010204K13Rik within coordinates of
Tssr5584 733 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237757225
MGI SNP Detail		 ChrX:7278294 2010204K13Rik within coordinates of
Tssr5584 689 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255796487
MGI SNP Detail		 ChrX:7278296 2010204K13Rik within coordinates of
Tssr5584 687 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs234726490
MGI SNP Detail		 ChrX:7278870 2010204K13Rik within coordinates of
Tssr5584 113 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247750245
MGI SNP Detail		 ChrX:7278952 2010204K13Rik within coordinates of
Tssr5584 31 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265782764
MGI SNP Detail		 ChrX:7278983 2010204K13Rik within coordinates of
Tssr5584 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231944354
MGI SNP Detail		 ChrX:7279054 2010204K13Rik within coordinates of
Tssr5584 68 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs33344455
MGI SNP Detail		 ChrX:7279273 2010204K13Rik within coordinates of
Tssr5584 287 bp upstream
 SNP A/G G G G G G G A G G G G G G G
rs214020678
MGI SNP Detail		 ChrX:7279284 2010204K13Rik within coordinates of
Tssr5584 298 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224428422
MGI SNP Detail		 ChrX:7279294 2010204K13Rik within coordinates of
Tssr5584 308 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242406464
MGI SNP Detail		 ChrX:7279385 2010204K13Rik within coordinates of
Tssr5584 399 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217409566
MGI SNP Detail		 ChrX:7279414 2010204K13Rik within coordinates of
Tssr5584 428 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242318800
MGI SNP Detail		 ChrX:7279436 2010204K13Rik within coordinates of
Tssr5584 450 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259680567
MGI SNP Detail		 ChrX:7279454 2010204K13Rik within coordinates of
Tssr5584 468 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216987986
MGI SNP Detail		 ChrX:7279547 2010204K13Rik within coordinates of
Tssr5584 561 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs237788327
MGI SNP Detail		 ChrX:7279717 2010204K13Rik within coordinates of
Tssr5584 731 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33344458
MGI SNP Detail		 ChrX:7279732 2010204K13Rik within coordinates of
Tssr5584 746 bp upstream
 SNP C/G C C C C C C C C G C C G C
rs219567579
MGI SNP Detail		 ChrX:7279763 2010204K13Rik within coordinates of
Tssr5584 777 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237692966
MGI SNP Detail		 ChrX:7279793 2010204K13Rik within coordinates of
Tssr5584 807 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249295581
MGI SNP Detail		 ChrX:7279842 2010204K13Rik within coordinates of
Tssr5584 856 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs226347183
MGI SNP Detail		 ChrX:7279867 2010204K13Rik within coordinates of
Tssr5584 881 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249854919
MGI SNP Detail		 ChrX:7279948 2010204K13Rik within coordinates of
Tssr5584 962 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs263467385
MGI SNP Detail		 ChrX:7280031 2010204K13Rik within coordinates of
Tssr5584 1045 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33344460
MGI SNP Detail		 ChrX:7280079 2010204K13Rik within coordinates of
Tssr5584 1093 bp upstream
 SNP A/G G G G G G G G G G A G G A G
rs238674401
MGI SNP Detail		 ChrX:7280131 2010204K13Rik within coordinates of
Tssr5584 1145 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs255779939
MGI SNP Detail		 ChrX:7280177 2010204K13Rik within coordinates of
Tssr5584 1191 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33344463
MGI SNP Detail		 ChrX:7280242 2010204K13Rik within coordinates of
Tssr5584 1256 bp upstream
 SNP A/G A A A A A A G A A A A A A A
rs242341543
MGI SNP Detail		 ChrX:7280295 2010204K13Rik within coordinates of
Tssr5584 1309 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs266159021
MGI SNP Detail		 ChrX:7280296 2010204K13Rik within coordinates of
Tssr5584 1310 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs233210647
MGI SNP Detail		 ChrX:7280492 2010204K13Rik within coordinates of
Tssr5584 1506 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258457934
MGI SNP Detail		 ChrX:7280561 2010204K13Rik within coordinates of
Tssr5584 1575 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215952689
MGI SNP Detail		 ChrX:7280643 2010204K13Rik within coordinates of
Tssr5584 1657 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33341394
MGI SNP Detail		 ChrX:7280686 2010204K13Rik within coordinates of
Tssr5584 1700 bp upstream
 SNP A/G A A A A A A G A A A A A A A
rs245626212
MGI SNP Detail		 ChrX:7280752 2010204K13Rik within coordinates of
Tssr5584 1766 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213587401
MGI SNP Detail		 ChrX:7280879 2010204K13Rik within coordinates of
Tssr5584 1893 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230564251
MGI SNP Detail		 ChrX:7280886 2010204K13Rik within coordinates of
Tssr5584 1900 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249629914
MGI SNP Detail		 ChrX:7280891 2010204K13Rik within coordinates of
Tssr5584 1905 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226741238
MGI SNP Detail		 ChrX:7280900 2010204K13Rik within coordinates of
Tssr5584 1914 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242805973
MGI SNP Detail		 ChrX:7280901 2010204K13Rik within coordinates of
Tssr5584 1915 bp upstream
 SNP C/G G C
rs263199654
MGI SNP Detail		 ChrX:7280918 2010204K13Rik within coordinates of
Tssr5584 1932 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs224005688
MGI SNP Detail		 ChrX:7280965 2010204K13Rik within coordinates of
Tssr5584 1979 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs238608516
MGI SNP Detail		 ChrX:7280976 2010204K13Rik within coordinates of
Tssr5584 1990 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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