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Mouse SNP Summary
Symbol
Name
ID 		Tssr5635
transcription start site region 5635
MGI:5933402

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220756349
MGI SNP Detail		 ChrX:72536713 Bgn within coordinates of
Tssr5635 1945 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246830422
MGI SNP Detail		 ChrX:72536768 Bgn within coordinates of
Tssr5635 1890 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256813212
MGI SNP Detail		 ChrX:72536977 Bgn within coordinates of
Tssr5635 1681 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G
rs220673287
MGI SNP Detail		 ChrX:72536988 Bgn within coordinates of
Tssr5635 1670 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs226459351
MGI SNP Detail		 ChrX:72537080 Bgn within coordinates of
Tssr5635 1578 bp downstream
 SNP A/G G A
rs261105624
MGI SNP Detail		 ChrX:72537092 Bgn within coordinates of
Tssr5635 1566 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs228403481
MGI SNP Detail		 ChrX:72537100 Bgn within coordinates of
Tssr5635 1558 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs241538882
MGI SNP Detail		 ChrX:72537138 Bgn within coordinates of
Tssr5635 1520 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259375011
MGI SNP Detail		 ChrX:72537146 Bgn within coordinates of
Tssr5635 1512 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs583170205
MGI SNP Detail		 ChrX:72537247 Bgn within coordinates of
Tssr5635 1411 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586520831
MGI SNP Detail		 ChrX:72537266 Bgn within coordinates of
Tssr5635 1392 bp downstream
 SNP A/G A A G A A A A A A A A A A A A A A A A A A A A A
rs580820958
MGI SNP Detail		 ChrX:72537270 Bgn within coordinates of
Tssr5635 1388 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584764416
MGI SNP Detail		 ChrX:72537278 Bgn within coordinates of
Tssr5635 1380 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240271099
MGI SNP Detail		 ChrX:72537306 Bgn within coordinates of
Tssr5635 1352 bp downstream
 SNP A/G A G
rs231301830
MGI SNP Detail		 ChrX:72537353 Bgn within coordinates of
Tssr5635 1305 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs255733677
MGI SNP Detail		 ChrX:72537379 Bgn within coordinates of
Tssr5635 1279 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G G G G G G G G G G G G
rs213161482
MGI SNP Detail		 ChrX:72537388 Bgn within coordinates of
Tssr5635 1270 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228300935
MGI SNP Detail		 ChrX:72537443 Bgn within coordinates of
Tssr5635 1215 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A T A A A A A A A A A A
rs581911622
MGI SNP Detail		 ChrX:72537490 Bgn within coordinates of
Tssr5635 1168 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G
rs585943906
MGI SNP Detail		 ChrX:72537517 Bgn within coordinates of
Tssr5635 1141 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579715114
MGI SNP Detail		 ChrX:72537555 Bgn within coordinates of
Tssr5635 1103 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs247483262
MGI SNP Detail		 ChrX:72537583 Bgn within coordinates of
Tssr5635 1075 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A
rs216852337
MGI SNP Detail		 ChrX:72537628 Bgn within coordinates of
Tssr5635 1030 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G C G G G G G G G C G G G G
rs233713463
MGI SNP Detail		 ChrX:72537657 Bgn within coordinates of
Tssr5635 1001 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245898968
MGI SNP Detail		 ChrX:72537664 Bgn within coordinates of
Tssr5635 994 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G C G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215064816
MGI SNP Detail		 ChrX:72537683 Bgn within coordinates of
Tssr5635 975 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs236821422
MGI SNP Detail		 ChrX:72537689 Bgn within coordinates of
Tssr5635 969 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs262007203
MGI SNP Detail		 ChrX:72537706 Bgn within coordinates of
Tssr5635 952 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs221410078
MGI SNP Detail		 ChrX:72537708 Bgn within coordinates of
Tssr5635 950 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs235895155
MGI SNP Detail		 ChrX:72537765 Bgn within coordinates of
Tssr5635 893 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs254906189
MGI SNP Detail		 ChrX:72537816 Bgn within coordinates of
Tssr5635 842 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs4232517
MGI SNP Detail		 ChrX:72538032 Bgn within coordinates of
Tssr5635 626 bp downstream
 SNP G/T T G G T G T T G
rs222475265
MGI SNP Detail		 ChrX:72538037 Bgn within coordinates of
Tssr5635 621 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs4232516
MGI SNP Detail		 ChrX:72538062 Bgn within coordinates of
Tssr5635 596 bp downstream
 SNP C/T C C C C C C C T
rs31666546
MGI SNP Detail		 ChrX:72538087 Bgn within coordinates of
Tssr5635 571 bp downstream
 SNP G/T G T
rs4232515
MGI SNP Detail		 ChrX:72538094 Bgn within coordinates of
Tssr5635 564 bp downstream
 SNP A/G A A A A A G A G
rs223455241
MGI SNP Detail		 ChrX:72538608 Bgn within coordinates of
Tssr163551 within coordinates of
Tssr5635 50 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29039261
MGI SNP Detail		 ChrX:72538645 Bgn within coordinates of
Tssr5635 13 bp downstream
 SNP C/T C T C
rs243415004
MGI SNP Detail		 ChrX:72538707 Bgn within coordinates of
Tssr161240 within coordinates of
Tssr5635 37 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264963878
MGI SNP Detail		 ChrX:72538737 Bgn within coordinates of
Tssr161241 within coordinates of
Tssr5635 67 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228111449
MGI SNP Detail		 ChrX:72538748 Bgn within coordinates of
Tssr5635 78 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247547815
MGI SNP Detail		 ChrX:72538765 Bgn within coordinates of
Tssr161242 within coordinates of
Tssr163553 within coordinates of
Tssr5635 95 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs259072819
MGI SNP Detail		 ChrX:72538902 Bgn within coordinates of
Tssr161242 within coordinates of
Tssr5635 232 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs29039260
MGI SNP Detail		 ChrX:72538920 Bgn within coordinates of
Tssr161243 within coordinates of
Tssr5635 250 bp upstream
 SNP C/G G C G
rs227771343
MGI SNP Detail		 ChrX:72538996 Bgn within coordinates of
Tssr161244 within coordinates of
Tssr5635 326 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245427677
MGI SNP Detail		 ChrX:72539139 Bgn within coordinates of
Tssr5635 469 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214903273
MGI SNP Detail		 ChrX:72539178 Bgn within coordinates of
Tssr5635 508 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs238923473
MGI SNP Detail		 ChrX:72539204 Bgn within coordinates of
Tssr5635 534 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250556272
MGI SNP Detail		 ChrX:72539282 Bgn within coordinates of
Tssr5635 612 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs213272566
MGI SNP Detail		 ChrX:72539318 Bgn within coordinates of
Tssr5635 648 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229861127
MGI SNP Detail		 ChrX:72539364 Bgn within coordinates of
Tssr5635 694 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254970688
MGI SNP Detail		 ChrX:72539370 Bgn within coordinates of
Tssr5635 700 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs13459665
MGI SNP Detail		 ChrX:72539372 Bgn within coordinates of
Tssr5635 702 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs234402337
MGI SNP Detail		 ChrX:72539447 Bgn within coordinates of
Tssr5635 777 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A A A
rs252599622
MGI SNP Detail		 ChrX:72539543 Tssr5635 873 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223094523
MGI SNP Detail		 ChrX:72539689 Tssr5635 1019 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246308369
MGI SNP Detail		 ChrX:72539703 Tssr5635 1033 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580427885
MGI SNP Detail		 ChrX:72539841 Tssr5635 1171 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262075666
MGI SNP Detail		 ChrX:72539853 Tssr5635 1183 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs220598330
MGI SNP Detail		 ChrX:72539866 Tssr5635 1196 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T
rs241902740
MGI SNP Detail		 ChrX:72539883 Tssr5635 1213 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T
rs259379709
MGI SNP Detail		 ChrX:72539911 Tssr5635 1241 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227647773
MGI SNP Detail		 ChrX:72540018 Tssr5635 1348 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C G C C C C
rs245301555
MGI SNP Detail		 ChrX:72540057 Tssr5635 1387 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265339697
MGI SNP Detail		 ChrX:72540085 Tssr5635 1415 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs230162223
MGI SNP Detail		 ChrX:72540115 Tssr5635 1445 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs255137026
MGI SNP Detail		 ChrX:72540215 Tssr5635 1545 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212692003
MGI SNP Detail		 ChrX:72540352 Tssr5635 1682 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs224236139
MGI SNP Detail		 ChrX:72540374 Tssr5635 1704 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248783263
MGI SNP Detail		 ChrX:72540398 Tssr5635 1728 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs216628033
MGI SNP Detail		 ChrX:72540514 Tssr5635 1844 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
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Showing SNP(s) 1 - 71 of 71
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory