Mouse SNP Summary
|
Symbol Name ID |
Tssr5899
transcription start site region 5899 MGI:5933666 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs235816204 MGI SNP Detail Alliance Variant |
Chr1:9616347 | Cpgi23 Rr407600 Rrs1 Tssr5899 |
SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||||||||||||||||
| rs580268787 MGI SNP Detail Alliance Variant |
Chr1:9616377 | Cpgi23 Rr407600 Rr407601 Rrs1 Tssr5899 |
SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||||||||||||||||||
| rs31477593 MGI SNP Detail Alliance Variant |
Chr1:9616378 | Cpgi23 Rr407600 Rr407601 Rrs1 Tssr5899 |
SNP | G/T | G | T | T | G | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs13467800 MGI SNP Detail Alliance Variant |
Chr1:9616396 | Cpgi23 Rr407600 Rrs1 Tssr5899 |
SNP | A | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs108170653 MGI SNP Detail Alliance Variant |
Chr1:9616400 | Cpgi23 Rr407600 Rrs1 Tssr5899 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs107851109 MGI SNP Detail Alliance Variant |
Chr1:9616436 | Cpgi23 Rr407600 Rrs1 Tssr5899 |
SNP | G | G | G | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs108911944 MGI SNP Detail Alliance Variant |
Chr1:9616440 | Cpgi23 Rr407600 Rrs1 Tssr5899 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs580154643 MGI SNP Detail Alliance Variant |
Chr1:9616448 | Cpgi23 Rr407600 Rrs1 Tssr5899 |
SNP | C | C | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs108783580 MGI SNP Detail Alliance Variant |
Chr1:9616493 | Rr407600 Rrs1 Tssr5899 |
SNP | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs107911644 MGI SNP Detail Alliance Variant |
Chr1:9616588 | Rr407600 Rrs1 Tssr5899 |
SNP | T | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs108666355 MGI SNP Detail Alliance Variant |
Chr1:9616625 | Rr407600 Rrs1 Tssr5899 |
SNP | A/C | A | A | A | C | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs107646993 MGI SNP Detail Alliance Variant |
Chr1:9616639 | Rr407600 Rrs1 Tssr5899 |
SNP | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs108285203 MGI SNP Detail Alliance Variant |
Chr1:9616694 | Rr407600 Rrs1 Tssr5899 |
SNP | C | C | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs108419698 MGI SNP Detail Alliance Variant |
Chr1:9616758 | Rr407600 Rrs1 Tssr5899 |
SNP | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs13467801 MGI SNP Detail Alliance Variant |
Chr1:9616775 | Rrs1 Tssr5899 |
SNP | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs586035871 MGI SNP Detail Alliance Variant |
Chr1:9616789 | Rrs1 Tssr5899 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||||
| rs108094096 MGI SNP Detail Alliance Variant |
Chr1:9616797 | Rrs1 Tssr5899 |
SNP | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs47524094 MGI SNP Detail Alliance Variant |
Chr1:9616865 | Rrs1 Tssr5899 |
SNP | A/T | T | A | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs580321471 MGI SNP Detail Alliance Variant |
Chr1:9616906 | Rrs1 Tssr5899 |
SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||||||||||||||||
| rs47371096 MGI SNP Detail Alliance Variant |
Chr1:9616929 | Rrs1 Tssr5899 |
SNP | A/G | A | G | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs51882380 MGI SNP Detail Alliance Variant |
Chr1:9616947 | Rrs1 Tssr5899 |
SNP | A/G | G | A | G | G | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs50429415 MGI SNP Detail Alliance Variant |
Chr1:9616985 | Rrs1 Tssr5899 |
SNP | A/G | A | G | A | G | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs47388181 MGI SNP Detail Alliance Variant |
Chr1:9617101 | Rrs1 Tssr5899 |
SNP | C/T | T | C | T | C | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs583009925 MGI SNP Detail Alliance Variant |
Chr1:9617148 | Rrs1 Tssr5899 |
SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs107628719 MGI SNP Detail Alliance Variant |
Chr1:9617164 | Rrs1 Tssr5899 |
SNP | G | G | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs6408157 MGI SNP Detail Alliance Variant |
Chr1:9617293 | Rrs1 Tssr5899 |
SNP | A/G | G | A | A | G | A | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs221583548 MGI SNP Detail Alliance Variant |
Chr1:9617370 | Rrs1 Tssr5899 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs233405941 MGI SNP Detail Alliance Variant |
Chr1:9617375 | Rrs1 Tssr5899 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs254942870 MGI SNP Detail Alliance Variant |
Chr1:9617392 | Rrs1 Tssr5899 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||
| rs226142783 MGI SNP Detail Alliance Variant |
Chr1:9617583 | Rrs1 Tssr5899 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs581244931 MGI SNP Detail Alliance Variant |
Chr1:9617605 | Rrs1 Tssr5899 |
SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs239196910 MGI SNP Detail Alliance Variant |
Chr1:9617619 | Rrs1 Tssr5899 |
SNP | A/G | A | G | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs258089146 MGI SNP Detail Alliance Variant |
Chr1:9617653 | Rrs1 Tssr5899 |
SNP | C/T | C | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs223297692 MGI SNP Detail |
Chr1:9617719 | Tssr5899 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs245826293 MGI SNP Detail |
Chr1:9617764 | Rr407602 Tssr5899 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs258248845 MGI SNP Detail |
Chr1:9617809 | Rr407602 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs227007653 MGI SNP Detail |
Chr1:9617820 | Rr407602 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs241602158 MGI SNP Detail |
Chr1:9617854 | Rr407602 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs583401463 MGI SNP Detail |
Chr1:9617904 | Rr407602 Tssr5899 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs259114945 MGI SNP Detail |
Chr1:9617962 | Rr407602 Tssr5899 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||
| rs229659643 MGI SNP Detail |
Chr1:9618004 | Rr407602 Tssr5899 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | ||
| rs249508556 MGI SNP Detail |
Chr1:9618030 | Rr407602 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs215487802 MGI SNP Detail |
Chr1:9618086 | Rr407602 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs230263507 MGI SNP Detail |
Chr1:9618092 | Rr407602 Tssr5899 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||
| rs583422856 MGI SNP Detail |
Chr1:9618144 | Rr407602 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs247521667 MGI SNP Detail |
Chr1:9618154 | Rr407602 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs581437450 MGI SNP Detail Alliance Variant |
Chr1:9618188 | Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||
| rs215657145 MGI SNP Detail Alliance Variant |
Chr1:9618201 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs233656469 MGI SNP Detail Alliance Variant |
Chr1:9618210 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs217596158 MGI SNP Detail Alliance Variant |
Chr1:9618281 | Adhfe1 Rr407603 Tssr5898 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs237242457 MGI SNP Detail Alliance Variant |
Chr1:9618300 | Adhfe1 Rr407603 Tssr5898 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||||
| rs255432658 MGI SNP Detail Alliance Variant |
Chr1:9618353 | Adhfe1 Adhfe1 Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | |||||
| rs223131082 MGI SNP Detail Alliance Variant |
Chr1:9618399 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||||
| rs584758951 MGI SNP Detail Alliance Variant |
Chr1:9618412 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||||
| rs237369811 MGI SNP Detail Alliance Variant |
Chr1:9618469 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs31200653 MGI SNP Detail Alliance Variant |
Chr1:9618507 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/T | T | A | A | A | A | T | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs31700544 MGI SNP Detail Alliance Variant |
Chr1:9618510 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/T | T | A | A | A | A | T | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs265942039 MGI SNP Detail Alliance Variant |
Chr1:9618617 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||||||
| rs228930349 MGI SNP Detail Alliance Variant |
Chr1:9618624 | Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||||
| rs244116537 MGI SNP Detail Alliance Variant |
Chr1:9618670 | Adhfe1 Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs579300899 MGI SNP Detail Alliance Variant |
Chr1:9618723 | Adhfe1 Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||
| rs262942318 MGI SNP Detail Alliance Variant |
Chr1:9618812 | Adhfe1 Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs31797888 MGI SNP Detail Alliance Variant |
Chr1:9618832 | Adhfe1 Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | C | C | C | C | G | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs247482372 MGI SNP Detail Alliance Variant |
Chr1:9618846 | Adhfe1 Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs215480387 MGI SNP Detail Alliance Variant |
Chr1:9618850 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs227124793 MGI SNP Detail Alliance Variant |
Chr1:9618859 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs248617917 MGI SNP Detail Alliance Variant |
Chr1:9618860 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs32374383 MGI SNP Detail Alliance Variant |
Chr1:9618865 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | A | A | G | G | G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs581558867 MGI SNP Detail Alliance Variant |
Chr1:9618876 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs32240807 MGI SNP Detail Alliance Variant |
Chr1:9618888 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | T | T | C | C | C | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs260636935 MGI SNP Detail Alliance Variant |
Chr1:9618890 | Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
| rs214704875 MGI SNP Detail Alliance Variant |
Chr1:9618928 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs231418860 MGI SNP Detail Alliance Variant |
Chr1:9618937 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs251828723 MGI SNP Detail Alliance Variant |
Chr1:9618956 | Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
| rs220679971 MGI SNP Detail Alliance Variant |
Chr1:9619009 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | ||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs30744667 MGI SNP Detail Alliance Variant |
Chr1:9619033 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | A | A | G | G | G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||
| rs260370404 MGI SNP Detail Alliance Variant |
Chr1:9619035 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs584121533 MGI SNP Detail Alliance Variant |
Chr1:9619062 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs578400336 MGI SNP Detail Alliance Variant |
Chr1:9619063 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs221297366 MGI SNP Detail Alliance Variant |
Chr1:9619111 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs241235981 MGI SNP Detail Alliance Variant |
Chr1:9619131 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs265312227 MGI SNP Detail Alliance Variant |
Chr1:9619134 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs219877590 MGI SNP Detail Alliance Variant |
Chr1:9619171 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | ||
| rs241649360 MGI SNP Detail Alliance Variant |
Chr1:9619234 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs259392770 MGI SNP Detail Alliance Variant |
Chr1:9619292 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs229431706 MGI SNP Detail Alliance Variant |
Chr1:9619317 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs259516656 MGI SNP Detail Alliance Variant |
Chr1:9619356 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs263891811 MGI SNP Detail Alliance Variant |
Chr1:9619357 | Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs228992527 MGI SNP Detail Alliance Variant |
Chr1:9619369 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs248838849 MGI SNP Detail Alliance Variant |
Chr1:9619452 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs214795914 MGI SNP Detail Alliance Variant |
Chr1:9619461 | Adhfe1 Rr407603 Tssr5899 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs231387927 MGI SNP Detail Alliance Variant |
Chr1:9619485 | Adhfe1 Rr407603 Tssr5899 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs32292246 MGI SNP Detail Alliance Variant |
Chr1:9619500 | Adhfe1 Rr407603 Tssr5899 |
SNP | G/T | G | T | T | T | T | G | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs215165992 MGI SNP Detail Alliance Variant |
Chr1:9619567 | Adhfe1 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs235018840 MGI SNP Detail Alliance Variant |
Chr1:9619644 | Adhfe1 Tssr5899 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | ||
| rs263692735 MGI SNP Detail Alliance Variant |
Chr1:9619702 | Adhfe1 Tssr5899 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs221765637 MGI SNP Detail Alliance Variant |
Chr1:9619707 | Adhfe1 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs236506662 MGI SNP Detail Alliance Variant |
Chr1:9619720 | Adhfe1 Tssr5899 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs32514480 MGI SNP Detail Alliance Variant |
Chr1:9619726 | Adhfe1 Tssr5899 |
SNP | A/G | A | G | G | G | G | A | |||||||||||||||||||||||||||||||||||||||||||||||||
| rs219675270 MGI SNP Detail Alliance Variant |
Chr1:9619766 | Adhfe1 Tssr5899 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | T | A | A | A | A |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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