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Mouse SNP Summary
Symbol
Name
ID 		Tssr6887
transcription start site region 6887
MGI:5934654

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261273963
MGI SNP Detail		 Chr1:59735387 Nop58 within coordinates of
Tssr6887 1832 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234027623
MGI SNP Detail		 Chr1:59735433 Nop58 within coordinates of
Tssr6887 1786 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs32827260
MGI SNP Detail		 Chr1:59735508 Nop58 within coordinates of
Tssr6887 1711 bp upstream
 SNP C/T T T C C T T T T T T T C T T T
rs265733587
MGI SNP Detail		 Chr1:59735607 Nop58 within coordinates of
Tssr6887 1612 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584129435
MGI SNP Detail		 Chr1:59735631 Nop58 within coordinates of
Tssr6887 1588 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579232532
MGI SNP Detail		 Chr1:59735632 Nop58 within coordinates of
Tssr6887 1587 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582762303
MGI SNP Detail		 Chr1:59735655 Nop58 within coordinates of
Tssr6887 1564 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231680734
MGI SNP Detail		 Chr1:59735700 Nop58 within coordinates of
Tssr6887 1519 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256513053
MGI SNP Detail		 Chr1:59735717 Nop58 within coordinates of
Tssr6887 1502 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213787702
MGI SNP Detail		 Chr1:59735723 Nop58 within coordinates of
Tssr6887 1496 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230987211
MGI SNP Detail		 Chr1:59735726 Nop58 within coordinates of
Tssr6887 1493 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219175315
MGI SNP Detail		 Chr1:59735757 Nop58 within coordinates of
Tssr6887 1462 bp upstream
 SNP C/T C T
rs236416848
MGI SNP Detail		 Chr1:59735819 Nop58 within coordinates of
Tssr6887 1400 bp upstream
 SNP A/T T A
rs584919922
MGI SNP Detail		 Chr1:59735830 Nop58 within coordinates of
Tssr6887 1389 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32827258
MGI SNP Detail		 Chr1:59735870 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1349 bp upstream
 SNP A/C A A A A A A A A A A A A C A C
rs242533341
MGI SNP Detail		 Chr1:59735930 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1289 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G
rs259789346
MGI SNP Detail		 Chr1:59735980 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1239 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223785922
MGI SNP Detail		 Chr1:59736036 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1183 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G A A G A G A A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236626085
MGI SNP Detail		 Chr1:59736136 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1083 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251033494
MGI SNP Detail		 Chr1:59736167 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1052 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218645237
MGI SNP Detail		 Chr1:59736172 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1047 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237103871
MGI SNP Detail		 Chr1:59736188 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1031 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255134486
MGI SNP Detail		 Chr1:59736219 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1000 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G
rs225782001
MGI SNP Detail		 Chr1:59736222 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 997 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs248934586
MGI SNP Detail		 Chr1:59736237 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 982 bp upstream
 SNP C/T C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263145079
MGI SNP Detail		 Chr1:59736288 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 931 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232247826
MGI SNP Detail		 Chr1:59736318 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 901 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253708129
MGI SNP Detail		 Chr1:59736327 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 892 bp upstream
 SNP A/T A T
rs255631345
MGI SNP Detail		 Chr1:59736383 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 836 bp upstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs224565948
MGI SNP Detail		 Chr1:59736423 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 796 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226741054
MGI SNP Detail		 Chr1:59736424 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 795 bp upstream
 SNP A/C A C
rs242618131
MGI SNP Detail		 Chr1:59736459 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 760 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219437263
MGI SNP Detail		 Chr1:59736462 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 757 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233331530
MGI SNP Detail		 Chr1:59736523 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 696 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247001067
MGI SNP Detail		 Chr1:59736597 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 622 bp upstream
 SNP A/C C A
rs32827257
MGI SNP Detail		 Chr1:59736645 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 574 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs578884312
MGI SNP Detail		 Chr1:59736646 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 573 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216135299
MGI SNP Detail		 Chr1:59736703 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 516 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265807919
MGI SNP Detail		 Chr1:59736745 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 474 bp upstream
 SNP C/G C G
rs32827255
MGI SNP Detail		 Chr1:59736768 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 451 bp upstream
 SNP A/C A A A A A A C A A A C A A C A
rs250907031
MGI SNP Detail		 Chr1:59736804 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 415 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212687501
MGI SNP Detail		 Chr1:59736850 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 369 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A G A A G A A A G G G A A A A A A A A A A A A G A
rs232021650
MGI SNP Detail		 Chr1:59736895 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 324 bp upstream
 SNP A/G G A
rs254988060
MGI SNP Detail		 Chr1:59736922 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr11836 within coordinates of
Tssr6887 297 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs226058258
MGI SNP Detail		 Chr1:59736926 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr11836 within coordinates of
Tssr6887 293 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246201394
MGI SNP Detail		 Chr1:59736939 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 280 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262900411
MGI SNP Detail		 Chr1:59736950 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 269 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs223343326
MGI SNP Detail		 Chr1:59736967 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 252 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245972522
MGI SNP Detail		 Chr1:59736998 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 221 bp upstream
 SNP A/G A G
rs255486653
MGI SNP Detail		 Chr1:59737009 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 210 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224414381
MGI SNP Detail		 Chr1:59737010 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 209 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs236048829
MGI SNP Detail		 Chr1:59737018 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 201 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257857466
MGI SNP Detail		 Chr1:59737075 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 144 bp upstream
 SNP C/G G C
rs582624465
MGI SNP Detail		 Chr1:59737145 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 74 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264494239
MGI SNP Detail		 Chr1:59737184 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 35 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234416716
MGI SNP Detail		 Chr1:59737244 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 10 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253401637
MGI SNP Detail		 Chr1:59737251 Nop58 within coordinates of
Rr371359 within coordinates of
Rr411703 within coordinates of
Tssr6887 17 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216687794
MGI SNP Detail		 Chr1:59737295 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 61 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226940144
MGI SNP Detail		 Chr1:59737304 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 70 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs51891043
MGI SNP Detail		 Chr1:59737305 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 71 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C T T C C C T C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs212550597
MGI SNP Detail		 Chr1:59737430 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 196 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32826113
MGI SNP Detail		 Chr1:59737431 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 197 bp downstream
 SNP A/G G G G G G G G G G G G G A G A
rs248590567
MGI SNP Detail		 Chr1:59737453 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 219 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217642944
MGI SNP Detail		 Chr1:59737479 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 245 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585760968
MGI SNP Detail		 Chr1:59737638 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 404 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240911336
MGI SNP Detail		 Chr1:59737652 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 418 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258514281
MGI SNP Detail		 Chr1:59737711 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 477 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32826112
MGI SNP Detail		 Chr1:59737726 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 492 bp downstream
 SNP C/T C C C C C C C C C C C T C C T C
rs225243335
MGI SNP Detail		 Chr1:59737769 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 535 bp downstream
 SNP C/T T C
rs32826111
MGI SNP Detail		 Chr1:59737778 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 544 bp downstream
 SNP A/G A A A A A A A A A A A A A G A G G G G
rs248856925
MGI SNP Detail		 Chr1:59737782 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 548 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218741073
MGI SNP Detail		 Chr1:59737855 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 621 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs108684073
MGI SNP Detail		 Chr1:59737860 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 626 bp downstream
 SNP A/G A A A A G G
rs266194877
MGI SNP Detail		 Chr1:59737885 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 651 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225936461
MGI SNP Detail		 Chr1:59737908 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 674 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249529638
MGI SNP Detail		 Chr1:59738115 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 881 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C
rs242130683
MGI SNP Detail		 Chr1:59738151 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 917 bp downstream
 SNP G/T G T
rs226778162
MGI SNP Detail		 Chr1:59738170 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 936 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs579902041
MGI SNP Detail		 Chr1:59738221 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 987 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245358074
MGI SNP Detail		 Chr1:59738223 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 989 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G T T G G G T T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs257104154
MGI SNP Detail		 Chr1:59738243 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1009 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T C T T C T T T C C C T T T T T T T T T T T T T T
rs223934668
MGI SNP Detail		 Chr1:59738285 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1051 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254359232
MGI SNP Detail		 Chr1:59738371 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1137 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217871765
MGI SNP Detail		 Chr1:59738419 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1185 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238448698
MGI SNP Detail		 Chr1:59738458 Nop58 within coordinates of
Rr371359 within coordinates of
Tssr6887 1224 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256911591
MGI SNP Detail		 Chr1:59738586 Nop58 within coordinates of
Tssr6887 1352 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253271913
MGI SNP Detail		 Chr1:59738590 Nop58 within coordinates of
Tssr6887 1356 bp downstream
 SNP C/G G C
rs217103596
MGI SNP Detail		 Chr1:59738591 Nop58 within coordinates of
Tssr6887 1357 bp downstream
 SNP A/T T A
rs237901841
MGI SNP Detail		 Chr1:59738650 Nop58 within coordinates of
Tssr6887 1416 bp downstream
 SNP A/C A C
rs581833133
MGI SNP Detail		 Chr1:59738709 Nop58 within coordinates of
Tssr6887 1475 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G T G G G G G G G G G G G G G
rs585283323
MGI SNP Detail		 Chr1:59738710 Nop58 within coordinates of
Tssr6887 1476 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A T T A A A A A A A A A A A A A
rs231277921
MGI SNP Detail		 Chr1:59738731 Nop58 within coordinates of
Tssr6887 1497 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250470806
MGI SNP Detail		 Chr1:59738785 Nop58 within coordinates of
Tssr6887 1551 bp downstream
 SNP A/G A G
rs213493241
MGI SNP Detail		 Chr1:59738804 Nop58 within coordinates of
Tssr6887 1570 bp downstream
 SNP C/T C T
rs248913996
MGI SNP Detail		 Chr1:59738819 Nop58 within coordinates of
Tssr6887 1585 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217919740
MGI SNP Detail		 Chr1:59738823 Nop58 within coordinates of
Tssr6887 1589 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230094506
MGI SNP Detail		 Chr1:59738975 Nop58 within coordinates of
Tssr6887 1741 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260936655
MGI SNP Detail		 Chr1:59738992 Nop58 within coordinates of
Tssr6887 1758 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230619574
MGI SNP Detail		 Chr1:59739027 Nop58 within coordinates of
Tssr6887 1793 bp downstream
 SNP C/T T C
rs246628159
MGI SNP Detail		 Chr1:59739063 Nop58 within coordinates of
Tssr6887 1829 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 100 of 101
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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