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Mouse SNP Summary
Symbol
Name
ID 		Tssr7228
transcription start site region 7228
MGI:5934995

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Showing SNP(s) 1 - 77 of 77

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30376075
MGI SNP Detail		 Chr1:67231098 Cps1 within coordinates of
Tssr7228 1875 bp upstream
 SNP C/T T T C C T T C T T T C C T T C T T
rs49297974
MGI SNP Detail		 Chr1:67231142 Cps1 within coordinates of
Tssr7228 1831 bp upstream
 SNP C C C C C
rs30376078
MGI SNP Detail		 Chr1:67231149 Cps1 within coordinates of
Tssr7228 1824 bp upstream
 SNP A/G A G G G A G A G
rs227602096
MGI SNP Detail		 Chr1:67231170 Cps1 within coordinates of
Tssr7228 1803 bp upstream
 SNP A/G A G
rs30376081
MGI SNP Detail		 Chr1:67231193 Cps1 within coordinates of
Tssr7228 1780 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs30376904
MGI SNP Detail		 Chr1:67231251 Cps1 within coordinates of
Tssr7228 1722 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs46266921
MGI SNP Detail		 Chr1:67231332 Cps1 within coordinates of
Tssr7228 1641 bp upstream
 SNP C/G G C
rs49913758
MGI SNP Detail		 Chr1:67231337 Cps1 within coordinates of
Tssr7228 1636 bp upstream
 SNP A/G A G
rs30376907
MGI SNP Detail		 Chr1:67231396 Cps1 within coordinates of
Tssr7228 1577 bp upstream
 SNP C/T T T C T T C
rs30376910
MGI SNP Detail		 Chr1:67231413 Cps1 within coordinates of
Tssr7228 1560 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs30376913
MGI SNP Detail		 Chr1:67231422 Cps1 within coordinates of
Tssr7228 1551 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs30377806
MGI SNP Detail		 Chr1:67231451 Cps1 within coordinates of
Tssr7228 1522 bp upstream
 SNP C/T T C T T T T T C T C T
rs30377809
MGI SNP Detail		 Chr1:67231454 Cps1 within coordinates of
Tssr7228 1519 bp upstream
 SNP C/T C C C C T C C T C C C C T C C T C C
rs30377812
MGI SNP Detail		 Chr1:67231507 Cps1 within coordinates of
Tssr7228 1466 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs30378744
MGI SNP Detail		 Chr1:67231567 Cps1 within coordinates of
Tssr7228 1406 bp upstream
 SNP A/C A A A A C A A A A A A A C A A C A A
rs30378746
MGI SNP Detail		 Chr1:67231628 Cps1 within coordinates of
Tssr7228 1345 bp upstream
 SNP A/T A A A A T A T A A A A T A A T A A
rs30378748
MGI SNP Detail		 Chr1:67231676 Cps1 within coordinates of
Tssr7228 1297 bp upstream
 SNP A/G A A A G A G A A A G A A A A A
rs30378750
MGI SNP Detail		 Chr1:67231722 Cps1 within coordinates of
Tssr7228 1251 bp upstream
 SNP C/T T T T T T T C T T T T T T T T
rs30378752
MGI SNP Detail		 Chr1:67231779 Cps1 within coordinates of
Tssr7228 1194 bp upstream
 SNP C/T T C T C T T C T C C
rs30380004
MGI SNP Detail		 Chr1:67231793 Cps1 within coordinates of
Tssr7228 1180 bp upstream
 SNP C/T T T C C T T T C C
rs46605623
MGI SNP Detail		 Chr1:67231794 Cps1 within coordinates of
Tssr7228 1179 bp upstream
 SNP A A A A
rs30380007
MGI SNP Detail		 Chr1:67231800 Cps1 within coordinates of
Tssr7228 1173 bp upstream
 SNP C/T C C C T
rs48293915
MGI SNP Detail		 Chr1:67231801 Cps1 within coordinates of
Tssr7228 1172 bp upstream
 SNP A A A A
rs30380010
MGI SNP Detail		 Chr1:67231822 Cps1 within coordinates of
Tssr7228 1151 bp upstream
 SNP C/T C C C T C C C C C C T C C T T C
rs30380012
MGI SNP Detail		 Chr1:67231834 Cps1 within coordinates of
Tssr7228 1139 bp upstream
 SNP A/G G G G A G G G G A G A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47500218
MGI SNP Detail		 Chr1:67231883 Cps1 within coordinates of
Tssr7228 1090 bp upstream
 SNP A A A A
rs30380845
MGI SNP Detail		 Chr1:67231955 Cps1 within coordinates of
Tssr7228 1018 bp upstream
 SNP A/C C C C C C C A C C C C C C C C
rs30376885
MGI SNP Detail		 Chr1:67231980 Cps1 within coordinates of
Tssr7228 993 bp upstream
 SNP C/T T T T T T T T T T C T
rs30376888
MGI SNP Detail		 Chr1:67231982 Cps1 within coordinates of
Tssr7228 991 bp upstream
 SNP A/G G G G G A G G G G G G G A G G A G G
rs30376891
MGI SNP Detail		 Chr1:67231993 Cps1 within coordinates of
Tssr7228 980 bp upstream
 SNP A/G G G G G A G G G G G G G A G G A G G
rs30377834
MGI SNP Detail		 Chr1:67232009 Cps1 within coordinates of
Tssr7228 964 bp upstream
 SNP C/T T T T C T T C T T T T C T T C T T
rs30377837
MGI SNP Detail		 Chr1:67232029 Cps1 within coordinates of
Tssr7228 944 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs30377840
MGI SNP Detail		 Chr1:67232067 Cps1 within coordinates of
Tssr7228 906 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs30377843
MGI SNP Detail		 Chr1:67232095 Cps1 within coordinates of
Tssr7228 878 bp upstream
 SNP C/T C C C C T C C C C C C C T C C T C C
rs30378756
MGI SNP Detail		 Chr1:67232198 Cps1 within coordinates of
Tssr7228 775 bp upstream
 SNP C/T T T C C T T T T T C C T T C T T
rs30378759
MGI SNP Detail		 Chr1:67232260 Cps1 within coordinates of
Tssr7228 713 bp upstream
 SNP C/T T T C C C T T T T C T T C T
rs30378762
MGI SNP Detail		 Chr1:67232262 Cps1 within coordinates of
Tssr7228 711 bp upstream
 SNP C/T C C C C C T C
rs46804146
MGI SNP Detail		 Chr1:67232263 Cps1 within coordinates of
Tssr7228 710 bp upstream
 SNP A A A A
rs30379655
MGI SNP Detail		 Chr1:67232318 Cps1 within coordinates of
Tssr7228 655 bp upstream
 SNP C/T C C C T C C C C C C C T C C T C C
rs30379658
MGI SNP Detail		 Chr1:67232342 Cps1 within coordinates of
Tssr7228 631 bp upstream
 SNP C/G G G G C G G G G G G G C G G G G G
rs30379661
MGI SNP Detail		 Chr1:67232378 Cps1 within coordinates of
Tssr7228 595 bp upstream
 SNP A/C C C C A C C C C C C C A C C A C C
rs30380494
MGI SNP Detail		 Chr1:67232512 Cps1 within coordinates of
Tssr7228 461 bp upstream
 SNP C/G C C G G C G G
rs258078439
MGI SNP Detail		 Chr1:67232514 Cps1 within coordinates of
Tssr7228 459 bp upstream
 SNP A/C C C C C A A A C C C C A A A A C C C A C C A C C C A A C A C C A C C C C C C A C C C C C A C A C A
rs30380497
MGI SNP Detail		 Chr1:67232652 Cps1 within coordinates of
Tssr7228 321 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs30380500
MGI SNP Detail		 Chr1:67232712 Cps1 within coordinates of
Tssr7228 261 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs47350483
MGI SNP Detail		 Chr1:67232745 Cps1 within coordinates of
Tssr7228 228 bp upstream
 SNP C C C C C
rs48734286
MGI SNP Detail		 Chr1:67232791 Cps1 within coordinates of
Tssr7228 182 bp upstream
 SNP A A A A A
rs31594156
MGI SNP Detail		 Chr1:67233094 Cps1 within coordinates of
Tssr7228 111 bp downstream
 SNP A/C C C C A C A C
rs30380503
MGI SNP Detail		 Chr1:67233117 Cps1 within coordinates of
Tssr7228 134 bp downstream
 SNP A/G G G G G A G A A G G G A A G A G G
rs31422691
MGI SNP Detail		 Chr1:67233119 Cps1 within coordinates of
Tssr7228 136 bp downstream
 SNP C/T C C C T C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30381426
MGI SNP Detail		 Chr1:67233192 Cps1 within coordinates of
Tssr7228 209 bp downstream
 SNP A/G A A A A G A A A A A A A G A A A A A
rs30381429
MGI SNP Detail		 Chr1:67233220 Cps1 within coordinates of
Tssr7228 237 bp downstream
 SNP A/C C C C C C C C C C C C C C A C
rs30381432
MGI SNP Detail		 Chr1:67233257 Cps1 within coordinates of
Tssr7228 274 bp downstream
 SNP A/C C C C C C A C C C C C C A C
rs30382255
MGI SNP Detail		 Chr1:67233290 Cps1 within coordinates of
Tssr7228 307 bp downstream
 SNP C/T C C T C C C C C C C T C C C C C C
rs30382258
MGI SNP Detail		 Chr1:67233499 Cps1 within coordinates of
Tssr7228 516 bp downstream
 SNP C/G G G C G C C G G G G C G C G G
rs30382261
MGI SNP Detail		 Chr1:67233787 Cps1 within coordinates of
Tssr7228 804 bp downstream
 SNP A/G G G G G A G G A G G G G G A G G G G G
rs30383044
MGI SNP Detail		 Chr1:67233820 Cps1 within coordinates of
Tssr7228 837 bp downstream
 SNP A/T A A A A A A A A A A A A A T A
rs52327424
MGI SNP Detail		 Chr1:67234038 Cps1 within coordinates of
Tssr7228 1055 bp downstream
 SNP G G G G
rs52088698
MGI SNP Detail		 Chr1:67234040 Cps1 within coordinates of
Tssr7228 1057 bp downstream
 SNP G G G
rs31495622
MGI SNP Detail		 Chr1:67234052 Cps1 within coordinates of
Tssr7228 1069 bp downstream
 SNP A/C C C A C
rs585415030
MGI SNP Detail		 Chr1:67234054 Cps1 within coordinates of
Tssr7228 1071 bp downstream
 SNP C/G C C G G G G C G G G G G G G C G G C G C G G G G G G G G C G
rs579926707
MGI SNP Detail		 Chr1:67234060 Cps1 within coordinates of
Tssr7228 1077 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C
rs30906013
MGI SNP Detail		 Chr1:67234080 Cps1 within coordinates of
Tssr7228 1097 bp downstream
 SNP A/G G G A G G G
rs30383050
MGI SNP Detail		 Chr1:67234096 Cps1 within coordinates of
Tssr7228 1113 bp downstream
 SNP C/T C C C C T C C T T C C C C T C C C C C
rs30383053
MGI SNP Detail		 Chr1:67234233 Cps1 within coordinates of
Tssr7228 1250 bp downstream
 SNP C/T C C C T C C T C C C C C T C C C C C
rs30383866
MGI SNP Detail		 Chr1:67234250 Cps1 within coordinates of
Tssr7228 1267 bp downstream
 SNP C/G G G G G C G G C C G G G G C G G C G G
rs30383869
MGI SNP Detail		 Chr1:67234419 Cps1 within coordinates of
Tssr7228 1436 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs30383872
MGI SNP Detail		 Chr1:67234453 Cps1 within coordinates of
Tssr7228 1470 bp downstream
 SNP G/T G G G G T G G T G G G G G T G G G G G
rs30384855
MGI SNP Detail		 Chr1:67234479 Cps1 within coordinates of
Tssr7228 1496 bp downstream
 SNP C/G G G C G G G G G C G G G G
rs30384858
MGI SNP Detail		 Chr1:67234496 Cps1 within coordinates of
Tssr7228 1513 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs30384861
MGI SNP Detail		 Chr1:67234545 Cps1 within coordinates of
Tssr7228 1562 bp downstream
 SNP C/T C C C C T C T C C C C C T C C C C C
rs32055275
MGI SNP Detail		 Chr1:67234554 Cps1 within coordinates of
Tssr7228 1571 bp downstream
 SNP C/T T T T C T C T
rs30376694
MGI SNP Detail		 Chr1:67234577 Cps1 within coordinates of
Tssr7228 1594 bp downstream
 SNP C/T T T T T C T T C C T T T T C T T T T T
rs30376697
MGI SNP Detail		 Chr1:67234760 Cps1 within coordinates of
Tssr7228 1777 bp downstream
 SNP A/G G A A G A A A
rs50236497
MGI SNP Detail		 Chr1:67234762 Cps1 within coordinates of
Tssr7228 1779 bp downstream
 SNP G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30376700
MGI SNP Detail		 Chr1:67234967 Cps1 within coordinates of
Tssr7228 1984 bp downstream
 SNP C/T C C C C C C C T C
rs30376703
MGI SNP Detail		 Chr1:67234980 Cps1 within coordinates of
Tssr7228 1997 bp downstream
 SNP A/G G G G G A G G A G G G G G A G G G G G
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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