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Mouse SNP Summary
Symbol
Name
ID
Tssr7745
transcription start site region 7745
MGI:5935512

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Showing SNP(s) 1 - 68 of 68

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262789311
MGI SNP Detail
Alliance Variant
Chr1:86282336 Ncl Intron
Tssr7745 1938 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C T C C C C T T C C C
rs224729408
MGI SNP Detail
Alliance Variant
Chr1:86282406 Ncl Intron
Tssr7745 1868 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249769070
MGI SNP Detail
Alliance Variant
Chr1:86282424 Ncl Intron
Tssr7745 1850 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260602599
MGI SNP Detail
Alliance Variant
Chr1:86282463 Ncl Intron
Tssr7745 1811 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G G T G
rs587465240
MGI SNP Detail
Alliance Variant
Chr1:86282495 Ncl Intron
Tssr7745 1779 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217946829
MGI SNP Detail
Alliance Variant
Chr1:86282556 Ncl Intron
Tssr7745 1718 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236716169
MGI SNP Detail
Alliance Variant
Chr1:86282686 Ncl Intron
Tssr7745 1588 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581374316
MGI SNP Detail
Alliance Variant
Chr1:86282912 Ncl Intron
Tssr7745 1362 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583109972
MGI SNP Detail
Alliance Variant
Chr1:86283110 Ncl Intron
Tssr7745 1164 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255348432
MGI SNP Detail
Alliance Variant
Chr1:86283135 Ncl Intron
Tssr7745 1139 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T T T T G T T T T G G T T T
rs225993299
MGI SNP Detail
Alliance Variant
Chr1:86283158 Ncl Intron
Tssr7745 1116 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245037294
MGI SNP Detail
Alliance Variant
Chr1:86283211 Ncl Intron
Tssr7745 1063 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31897325
MGI SNP Detail
Alliance Variant
Chr1:86283320 Ncl Intron
Tssr7745 954 bp upstream
SNP A/C A C A
rs232520724
MGI SNP Detail
Alliance Variant
Chr1:86283327 Ncl Intron
Tssr7745 947 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C A C C C C C C C C
rs259257003
MGI SNP Detail
Alliance Variant
Chr1:86283385 Ncl Intron
Tssr7745 889 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33039073
MGI SNP Detail
Alliance Variant
Chr1:86283408 Ncl Intron
Tssr7745 866 bp upstream
SNP A/C C C C C C C C C C C A C C C C
rs219369933
MGI SNP Detail
Alliance Variant
Chr1:86283437 Ncl Intron
Tssr7745 837 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224278122
MGI SNP Detail
Alliance Variant
Chr1:86283443 Ncl Intron
Tssr7745 831 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33039071
MGI SNP Detail
Alliance Variant
Chr1:86283537 Ncl Intron
Tssr7745 737 bp upstream
SNP C/T T T T T T T T T T T C T T T T
rs244645078
MGI SNP Detail
Alliance Variant
Chr1:86283571 Ncl Intron
Tssr7745 703 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213979892
MGI SNP Detail
Alliance Variant
Chr1:86283588 Ncl Intron
Tssr7745 686 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33039069
MGI SNP Detail
Alliance Variant
Chr1:86283655 Ncl Intron
Tssr7745 619 bp upstream
SNP A/G G G G G G G A G G G G A G G G A G
rs258878473
MGI SNP Detail
Alliance Variant
Chr1:86283708 Ncl Intron
Tssr7745 566 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33039067
MGI SNP Detail
Alliance Variant
Chr1:86283763 Ncl Intron
Tssr7745 511 bp upstream
SNP G/T T T T T T T G T T T T T T T T
rs239216203
MGI SNP Detail
Alliance Variant
Chr1:86283815 Ncl Coding-Synonymous
Tssr7745 459 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33039065
MGI SNP Detail
Alliance Variant
Chr1:86284007 Ncl Intron
Snord82 Noncoding-Transcript-Variant
Tssr7745 267 bp upstream
SNP C/T C C C C C C C C C C T C C C C
rs264089672
MGI SNP Detail
Alliance Variant
Chr1:86284201 Ncl Intron
Tssr7745 73 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217718580
MGI SNP Detail
Alliance Variant
Chr1:86284216 Ncl Intron
Tssr7745 58 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236339900
MGI SNP Detail
Alliance Variant
Chr1:86284227 Ncl Intron
Tssr7745 47 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A T A A A A T T A A A
rs249696059
MGI SNP Detail
Alliance Variant
Chr1:86284228 Ncl Intron
Tssr7745 46 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G T G G G G T T G G G
rs33045659
MGI SNP Detail
Alliance Variant
Chr1:86284240 Ncl Intron
Tssr7745 34 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs586550504
MGI SNP Detail
Alliance Variant
Chr1:86284303 Ncl Coding-NonSynonymous
Tssr7745 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs581179468
MGI SNP Detail
Alliance Variant
Chr1:86284309 Ncl Coding-Synonymous
Tssr7745 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584580540
MGI SNP Detail
Alliance Variant
Chr1:86284333 Ncl Coding-NonSynonymous
Tssr7745 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs8256596
MGI SNP Detail
Alliance Variant
Chr1:86284424 Ncl Coding-NonSynonymous
Tssr7745 69 bp downstream
SNP C/T C C C C C C C T C C C C
rs8256597
MGI SNP Detail
Alliance Variant
Chr1:86284493 Ncl Intron
Tssr7745 138 bp downstream
SNP A/G G G G G G G G G G G G G A
rs8256598
MGI SNP Detail
Alliance Variant
Chr1:86284520 Ncl Intron
Tssr7745 165 bp downstream
SNP C/G G G G G G G G G G G G G G G C G G G G G G C G
rs8256599
MGI SNP Detail
Alliance Variant
Chr1:86284526 Ncl Intron
Tssr7745 171 bp downstream
SNP G/T T T T T T T T T T T T G
rs8256600
MGI SNP Detail
Alliance Variant
Chr1:86284555 Ncl Intron
Tssr7745 200 bp downstream
SNP C/T T T T T T T T T T T T T C
rs8256601
MGI SNP Detail
Alliance Variant
Chr1:86284616 Ncl Intron
Tssr7745 261 bp downstream
SNP A/T A A A A A A A A A A A T
rs8256602
MGI SNP Detail
Alliance Variant
Chr1:86284630 Ncl Intron
Tssr7745 275 bp downstream
SNP A/G G G G G G G G G G G G A
rs8256603
MGI SNP Detail
Alliance Variant
Chr1:86284645 Ncl Intron
Tssr7745 290 bp downstream
SNP C/T T T T T T T T T T T T C
rs8256604
MGI SNP Detail
Alliance Variant
Chr1:86284662 Ncl Intron
Tssr7745 307 bp downstream
SNP C/T C C C C C C C C C C C T
rs579094507
MGI SNP Detail
Alliance Variant
Chr1:86284695 Ncl Coding-NonSynonymous
Tssr7745 340 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33045656
MGI SNP Detail
Alliance Variant
Chr1:86284743 Ncl Coding-Synonymous
Tssr142 within coordinates of
Tssr7745 388 bp downstream
SNP G/T T T T T T T T T T T G T T T T
rs8256615
MGI SNP Detail
Alliance Variant
Chr1:86284845 Ncl Coding-NonSynonymous
Tssr12778 within coordinates of
Tssr7745 490 bp downstream
SNP A/T A A A A A A A A T
rs8256616
MGI SNP Detail
Alliance Variant
Chr1:86284857 Ncl Coding-NonSynonymous
Tssr12778 within coordinates of
Tssr7745 502 bp downstream
SNP G/T T T T T T T T T T G
rs31581102
MGI SNP Detail
Alliance Variant
Chr1:86284944 Ncl Coding-Synonymous
Tssr7745 589 bp downstream
SNP A/G A A A A A A A A G A A A A A A A
rs217178772
MGI SNP Detail
Alliance Variant
Chr1:86285322 Ncl Intron
Tssr7745 967 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242402977
MGI SNP Detail
Alliance Variant
Chr1:86285325 Ncl Intron
Tssr7745 970 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254528137
MGI SNP Detail
Alliance Variant
Chr1:86285432 Ncl Intron
Tssr7745 1077 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581295915
MGI SNP Detail
Alliance Variant
Chr1:86285484 Ncl Intron
Tssr7745 1129 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs211821236
MGI SNP Detail
Alliance Variant
Chr1:86285489 Ncl Intron
Tssr7745 1134 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T A A T T T T T T T T T T T T T T T T T A T T T T T
rs584466979
MGI SNP Detail
Alliance Variant
Chr1:86285501 Ncl Intron
Tssr7745 1146 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230442964
MGI SNP Detail
Alliance Variant
Chr1:86285506 Ncl Intron
Tssr7745 1151 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G T G G G G T T G G G G G G G G G G G G G G G G G G G G G T G G G G G G
rs249347161
MGI SNP Detail
Alliance Variant
Chr1:86285559 Ncl Intron
Tssr7745 1204 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220026728
MGI SNP Detail
Alliance Variant
Chr1:86285563 Ncl Intron
Tssr7745 1208 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579320775
MGI SNP Detail
Alliance Variant
Chr1:86285655 D1Mit516 within coordinates of
Ncl Intron
Tssr7745 1300 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582532459
MGI SNP Detail
Alliance Variant
Chr1:86285656 D1Mit516 within coordinates of
Ncl Intron
Tssr7745 1301 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223974716
MGI SNP Detail
Alliance Variant
Chr1:86285658 D1Mit516 within coordinates of
Ncl Intron
Tssr7745 1303 bp downstream
SNP A/G G A
rs387827680
MGI SNP Detail
Alliance Variant
Chr1:86285688 D1Mit516 within coordinates of
Ncl Intron
Tssr7745 1333 bp downstream
SNP A/G A A A A A A A A A G A A A A A A A A A A A
rs237808024
MGI SNP Detail
Alliance Variant
Chr1:86285943 Ncl Coding-Synonymous
Ncl mRNA-UTR
Ncl Splice-Site
Tssr12786 within coordinates of
Tssr7745 1588 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263329969
MGI SNP Detail
Alliance Variant
Chr1:86286003 Ncl Intron
Tssr7745 1648 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225664533
MGI SNP Detail
Alliance Variant
Chr1:86286039 Ncl Intron
Tssr7745 1684 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T C T T T T C C T T T
rs251063211
MGI SNP Detail
Alliance Variant
Chr1:86286046 Ncl Intron
Tssr7745 1691 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261421286
MGI SNP Detail
Alliance Variant
Chr1:86286062 Ncl Intron
Tssr7745 1707 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218280463
MGI SNP Detail
Alliance Variant
Chr1:86286155 Ncl Intron
Rr414541 within coordinates of
Tssr7745 1800 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs238147304
MGI SNP Detail
Alliance Variant
Chr1:86286334 Cpgi503 within coordinates of
Ncl Intron
Ncl mRNA-UTR
Rr414541 within coordinates of
Tssr7745 1979 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 68 of 68

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/29/2025
MGI 6.24
The Jackson Laboratory