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Mouse SNP Summary
Symbol
Name
ID 		Tssr7963
transcription start site region 7963
MGI:5935730

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Showing SNP(s) 1 - 100 of 122

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
CAST/EiJ
CBA/J
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262235342
MGI SNP Detail		 Chr1:88185104 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1994 bp upstream
 SNP A/G G G G A G
rs51242064
MGI SNP Detail		 Chr1:88185117 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1981 bp upstream
 SNP C C
rs47822075
MGI SNP Detail		 Chr1:88185166 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1932 bp upstream
 SNP G G G G
rs46171337
MGI SNP Detail		 Chr1:88185189 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1909 bp upstream
 SNP T T T T
rs587101307
MGI SNP Detail		 Chr1:88185237 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1861 bp upstream
 SNP A/G A A A G A
rs223826464
MGI SNP Detail		 Chr1:88185290 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1808 bp upstream
 SNP A/G A A A A A A G A
rs48080626
MGI SNP Detail		 Chr1:88185296 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1802 bp upstream
 SNP C/T T C C
rs47907572
MGI SNP Detail		 Chr1:88185299 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1799 bp upstream
 SNP G G G G
rs47398905
MGI SNP Detail		 Chr1:88185448 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1650 bp upstream
 SNP G G G G
rs45916248
MGI SNP Detail		 Chr1:88185461 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1637 bp upstream
 SNP T T T
rs258204335
MGI SNP Detail		 Chr1:88185480 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1618 bp upstream
 SNP A/G A A A A A G A
rs221979521
MGI SNP Detail		 Chr1:88185485 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1613 bp upstream
 SNP A/G A A A A A G
rs46766240
MGI SNP Detail		 Chr1:88185524 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1574 bp upstream
 SNP G G G G
rs50653523
MGI SNP Detail		 Chr1:88185529 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1569 bp upstream
 SNP A A A A
rs108429360
MGI SNP Detail		 Chr1:88185542 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1556 bp upstream
 SNP C C C C
rs241761177
MGI SNP Detail		 Chr1:88185578 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1520 bp upstream
 SNP C/T C C C C C C C T C
rs50523508
MGI SNP Detail		 Chr1:88185611 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1487 bp upstream
 SNP A A A
rs229135251
MGI SNP Detail		 Chr1:88185613 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1485 bp upstream
 SNP C/T C C C C C C C T C
rs242962529
MGI SNP Detail		 Chr1:88185631 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1467 bp upstream
 SNP A/G A A A A A A A A A G A
rs48983878
MGI SNP Detail		 Chr1:88185650 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1448 bp upstream
 SNP G G G G G
rs231650045
MGI SNP Detail		 Chr1:88185680 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1418 bp upstream
 SNP A/C C C C C C C C A C
rs51687669
MGI SNP Detail		 Chr1:88185701 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1397 bp upstream
 SNP C C
rs48157674
MGI SNP Detail		 Chr1:88185783 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1315 bp upstream
 SNP C C
rs49854849
MGI SNP Detail		 Chr1:88185813 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1285 bp upstream
 SNP C/G C G G
rs49001352
MGI SNP Detail		 Chr1:88185857 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1241 bp upstream
 SNP C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
CAST/EiJ
CBA/J
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30303025
MGI SNP Detail		 Chr1:88185876 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1222 bp upstream
 SNP A/G G G G G G A G G G G G G G G A
rs49282699
MGI SNP Detail		 Chr1:88185919 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1179 bp upstream
 SNP C/T T T T T C T
rs30303024
MGI SNP Detail		 Chr1:88186078 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1020 bp upstream
 SNP C/T C C T C T C C T C T C C
rs49426665
MGI SNP Detail		 Chr1:88186080 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1018 bp upstream
 SNP G G G
rs581458585
MGI SNP Detail		 Chr1:88186179 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 919 bp upstream
 SNP C/G G G G G G G C
rs243361112
MGI SNP Detail		 Chr1:88186207 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 891 bp upstream
 SNP A/G A A A A A A G
rs212640068
MGI SNP Detail		 Chr1:88186260 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 838 bp upstream
 SNP C/G G G G G G C
rs51606179
MGI SNP Detail		 Chr1:88186264 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 834 bp upstream
 SNP G G G
rs237731535
MGI SNP Detail		 Chr1:88186274 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 824 bp upstream
 SNP C/G C C C C C G
rs48876495
MGI SNP Detail		 Chr1:88186430 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 668 bp upstream
 SNP C C
rs51814166
MGI SNP Detail		 Chr1:88186431 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 667 bp upstream
 SNP A/G A G
rs45783408
MGI SNP Detail		 Chr1:88186445 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 653 bp upstream
 SNP G G G
rs49604883
MGI SNP Detail		 Chr1:88186481 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 617 bp upstream
 SNP T T T
rs257356882
MGI SNP Detail		 Chr1:88186539 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 559 bp upstream
 SNP G/T T T T T T T T T G T T
rs49848966
MGI SNP Detail		 Chr1:88186543 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 555 bp upstream
 SNP C/T T T T T T C T
rs52006394
MGI SNP Detail		 Chr1:88186570 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 528 bp upstream
 SNP A/G A A A A A G A
rs252266261
MGI SNP Detail		 Chr1:88186574 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 524 bp upstream
 SNP A/G A A A A A A A A A A G A A
rs222032003
MGI SNP Detail		 Chr1:88186587 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 511 bp upstream
 SNP C/T T T T T T T T T T T T C T
rs241629378
MGI SNP Detail		 Chr1:88186642 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 456 bp upstream
 SNP C/T T T T T T T T T T T T T C T T T
rs248369983
MGI SNP Detail		 Chr1:88186662 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 436 bp upstream
 SNP G/T G G G G G G G G G G G G G T G G G
rs49825123
MGI SNP Detail		 Chr1:88186691 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 407 bp upstream
 SNP G G G
rs49245147
MGI SNP Detail		 Chr1:88186694 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 404 bp upstream
 SNP G G
rs108781526
MGI SNP Detail		 Chr1:88186727 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 371 bp upstream
 SNP A A A
rs221829760
MGI SNP Detail		 Chr1:88186753 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 345 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T G T T T
rs46887852
MGI SNP Detail		 Chr1:88186759 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 339 bp upstream
 SNP T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
CAST/EiJ
CBA/J
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583350992
MGI SNP Detail		 Chr1:88186805 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 293 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48446177
MGI SNP Detail		 Chr1:88186942 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 156 bp upstream
 SNP G G
rs262724262
MGI SNP Detail		 Chr1:88186972 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 126 bp upstream
 SNP A/G A A A A A A A A A A A A A G A A
rs50130173
MGI SNP Detail		 Chr1:88186999 Mroh2a within coordinates of
Rr18061 within coordinates of
Rr35066 within coordinates of
Tssr7963 99 bp upstream
 SNP G G
rs46397313
MGI SNP Detail		 Chr1:88187040 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 58 bp upstream
 SNP C C C
rs231960388
MGI SNP Detail		 Chr1:88187048 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 50 bp upstream
 SNP A/G A A A A A A A A A A A A G A
rs241262979
MGI SNP Detail		 Chr1:88187055 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 43 bp upstream
 SNP A/C C C C C C C C C C C C C A C
rs260614264
MGI SNP Detail		 Chr1:88187059 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 39 bp upstream
 SNP C/T C C C C C C C C C C C T C
rs228975466
MGI SNP Detail		 Chr1:88187080 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 18 bp upstream
 SNP C/T T T T T T T T C T
rs243220925
MGI SNP Detail		 Chr1:88187087 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 11 bp upstream
 SNP C/T T T T T T T T C T
rs46221671
MGI SNP Detail		 Chr1:88187091 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 7 bp upstream
 SNP T T
rs49917120
MGI SNP Detail		 Chr1:88187092 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 6 bp upstream
 SNP G G
rs46339511
MGI SNP Detail		 Chr1:88187149 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 40 bp downstream
Tssr7965 within coordinates of
 SNP C C
rs581093463
MGI SNP Detail		 Chr1:88187158 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 49 bp downstream
Tssr7965 within coordinates of
 SNP G G G
rs229622550
MGI SNP Detail		 Chr1:88187175 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 66 bp downstream
 SNP G/T T T T T G T
rs255952093
MGI SNP Detail		 Chr1:88187177 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 68 bp downstream
 SNP A/T T T T T A T
rs584226449
MGI SNP Detail		 Chr1:88187192 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 83 bp downstream
 SNP C/T C C C C T C
rs51612298
MGI SNP Detail		 Chr1:88187223 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 114 bp downstream
 SNP A A A
rs51479680
MGI SNP Detail		 Chr1:88187259 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 150 bp downstream
 SNP T T
rs30301550
MGI SNP Detail		 Chr1:88187289 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 180 bp downstream
 SNP A/G A G A G A G A A G G A G
rs252326245
MGI SNP Detail		 Chr1:88187313 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 204 bp downstream
 SNP A/C C C C A C
rs216998432
MGI SNP Detail		 Chr1:88187327 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 218 bp downstream
 SNP C/T C C T C
rs51988289
MGI SNP Detail		 Chr1:88187328 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 219 bp downstream
 SNP G G G
rs47903157
MGI SNP Detail		 Chr1:88187329 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 220 bp downstream
 SNP C/T T T C T
rs45956619
MGI SNP Detail		 Chr1:88187342 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 233 bp downstream
 SNP A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
CAST/EiJ
CBA/J
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZW/LacJ
PL/J
PWD/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248232909
MGI SNP Detail		 Chr1:88187394 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 285 bp downstream
 SNP A/G G G G A G G
rs49400006
MGI SNP Detail		 Chr1:88187400 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 291 bp downstream
 SNP A/G A G
rs243387115
MGI SNP Detail		 Chr1:88187413 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 304 bp downstream
 SNP A/G G G G A G G
rs48839757
MGI SNP Detail		 Chr1:88187463 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 354 bp downstream
 SNP G G
rs262535042
MGI SNP Detail		 Chr1:88187501 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 392 bp downstream
 SNP A/G A A G A
rs47144880
MGI SNP Detail		 Chr1:88187515 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 406 bp downstream
 SNP A/G A G
rs51371088
MGI SNP Detail		 Chr1:88187555 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 446 bp downstream
 SNP C C
rs241147814
MGI SNP Detail		 Chr1:88187563 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 454 bp downstream
 SNP C/G G G G G C G
rs260494162
MGI SNP Detail		 Chr1:88187583 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 474 bp downstream
 SNP A/T A A A A T A
rs46157796
MGI SNP Detail		 Chr1:88187635 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 526 bp downstream
 SNP G G G
rs50377244
MGI SNP Detail		 Chr1:88187724 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 615 bp downstream
 SNP G G G
rs50009999
MGI SNP Detail		 Chr1:88187725 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 616 bp downstream
 SNP G G G
rs49508442
MGI SNP Detail		 Chr1:88187762 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 653 bp downstream
 SNP G G G
rs49981145
MGI SNP Detail		 Chr1:88187766 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 657 bp downstream
 SNP G G G
rs50836570
MGI SNP Detail		 Chr1:88187773 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 664 bp downstream
 SNP T T T
rs45946985
MGI SNP Detail		 Chr1:88187952 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 843 bp downstream
 SNP C C C
rs237143482
MGI SNP Detail		 Chr1:88187964 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 855 bp downstream
 SNP C/T T T T T C T
rs45684879
MGI SNP Detail		 Chr1:88188057 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 948 bp downstream
 SNP A/C A C
rs49044252
MGI SNP Detail		 Chr1:88188084 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 975 bp downstream
 SNP C C
rs49279376
MGI SNP Detail		 Chr1:88188150 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1041 bp downstream
 SNP C C
rs51032499
MGI SNP Detail		 Chr1:88188186 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1077 bp downstream
 SNP C C C
rs251318070
MGI SNP Detail		 Chr1:88188208 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1099 bp downstream
 SNP C/T C C C C C C T C
rs46826200
MGI SNP Detail		 Chr1:88188223 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1114 bp downstream
 SNP T T T
rs265442416
MGI SNP Detail		 Chr1:88188236 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1127 bp downstream
 SNP C/T T T T T T C T T
rs49150487
MGI SNP Detail		 Chr1:88188277 Mroh2a within coordinates of
Rr35066 within coordinates of
Tssr7963 1168 bp downstream
 SNP C C C
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Showing SNP(s) 1 - 100 of 122
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory