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Mouse SNP Summary
Symbol
Name
ID 		Tssr8396
transcription start site region 8396
MGI:5936163

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243677033
MGI SNP Detail		 Chr1:119981036 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1927 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs261430448
MGI SNP Detail		 Chr1:119981057 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1906 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228737220
MGI SNP Detail		 Chr1:119981075 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1888 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247483877
MGI SNP Detail		 Chr1:119981086 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1877 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs215459003
MGI SNP Detail		 Chr1:119981110 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1853 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239381984
MGI SNP Detail		 Chr1:119981143 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1820 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585215346
MGI SNP Detail		 Chr1:119981147 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1816 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs578314650
MGI SNP Detail		 Chr1:119981155 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1808 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251078019
MGI SNP Detail		 Chr1:119981229 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1734 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs213813326
MGI SNP Detail		 Chr1:119981237 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1726 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260665097
MGI SNP Detail		 Chr1:119981534 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1429 bp upstream
 SNP G G G
rs247950201
MGI SNP Detail		 Chr1:119981568 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1395 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222489301
MGI SNP Detail		 Chr1:119981669 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1294 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48441948
MGI SNP Detail		 Chr1:119981675 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1288 bp upstream
 SNP C C C C C
rs251814844
MGI SNP Detail		 Chr1:119981699 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1264 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224088989
MGI SNP Detail		 Chr1:119981722 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1241 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246835958
MGI SNP Detail		 Chr1:119981723 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1240 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262375208
MGI SNP Detail		 Chr1:119981734 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1229 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221165810
MGI SNP Detail		 Chr1:119981793 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1170 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237291936
MGI SNP Detail		 Chr1:119981812 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1151 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261344450
MGI SNP Detail		 Chr1:119981813 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1150 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228626565
MGI SNP Detail		 Chr1:119981822 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1141 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241425941
MGI SNP Detail		 Chr1:119981892 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1071 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs30662472
MGI SNP Detail		 Chr1:119981900 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1063 bp upstream
 SNP A/C C C C A C C C
rs231212325
MGI SNP Detail		 Chr1:119981925 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1038 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255722602
MGI SNP Detail		 Chr1:119982094 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 869 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31596593
MGI SNP Detail		 Chr1:119982139 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 824 bp upstream
 SNP G/T T T G T T T
rs50728320
MGI SNP Detail		 Chr1:119982228 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 735 bp upstream
 SNP A/C A A A A A C A C
rs223960603
MGI SNP Detail		 Chr1:119982253 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 710 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241983982
MGI SNP Detail		 Chr1:119982322 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 641 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32144596
MGI SNP Detail		 Chr1:119982348 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 615 bp upstream
 SNP C/G G G C G G G
rs581997118
MGI SNP Detail		 Chr1:119982362 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 601 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30839211
MGI SNP Detail		 Chr1:119982386 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 577 bp upstream
 SNP A/G A A G A
rs234049696
MGI SNP Detail		 Chr1:119982387 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 576 bp upstream
 SNP A/G A A A A G A A A A A A G G G G A A G A A A G A A A A A A G A A A A A G A A A A A A A A A A A A G A A G A
rs578692302
MGI SNP Detail		 Chr1:119982392 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 571 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs251792854
MGI SNP Detail		 Chr1:119982421 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 542 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216003716
MGI SNP Detail		 Chr1:119982444 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 519 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236904244
MGI SNP Detail		 Chr1:119982579 Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 384 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582386586
MGI SNP Detail		 Chr1:119982641 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 322 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585661042
MGI SNP Detail		 Chr1:119982657 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 306 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261987626
MGI SNP Detail		 Chr1:119982739 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 224 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221426205
MGI SNP Detail		 Chr1:119982753 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 210 bp upstream
 SNP C/T C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32623423
MGI SNP Detail		 Chr1:119982808 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 155 bp upstream
 SNP C/T T T C T T T
rs255304058
MGI SNP Detail		 Chr1:119982843 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 120 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222753135
MGI SNP Detail		 Chr1:119982857 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 106 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241418573
MGI SNP Detail		 Chr1:119982863 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 100 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263286925
MGI SNP Detail		 Chr1:119982890 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 73 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231481260
MGI SNP Detail		 Chr1:119983214 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 248 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243516337
MGI SNP Detail		 Chr1:119983229 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 263 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31186367
MGI SNP Detail		 Chr1:119983268 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 302 bp downstream
 SNP C/T C C T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223817093
MGI SNP Detail		 Chr1:119983330 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 364 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs247798007
MGI SNP Detail		 Chr1:119983331 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 365 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217057148
MGI SNP Detail		 Chr1:119983424 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 458 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228034542
MGI SNP Detail		 Chr1:119983426 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 460 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs257939072
MGI SNP Detail		 Chr1:119983460 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 494 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215440212
MGI SNP Detail		 Chr1:119983490 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 524 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32123137
MGI SNP Detail		 Chr1:119983520 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 554 bp downstream
 SNP A/G A A A G A A A
rs256926868
MGI SNP Detail		 Chr1:119983522 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 556 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs213113233
MGI SNP Detail		 Chr1:119983545 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 579 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A
rs229840005
MGI SNP Detail		 Chr1:119983549 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 583 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs255294158
MGI SNP Detail		 Chr1:119983555 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 589 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs50601175
MGI SNP Detail		 Chr1:119983616 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 650 bp downstream
 SNP G/T G G G G G G G G G T G T G
rs241370275
MGI SNP Detail		 Chr1:119983621 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 655 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262987341
MGI SNP Detail		 Chr1:119983663 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 697 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223607419
MGI SNP Detail		 Chr1:119983679 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 713 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246185265
MGI SNP Detail		 Chr1:119983759 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 793 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262066006
MGI SNP Detail		 Chr1:119983761 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 795 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218206875
MGI SNP Detail		 Chr1:119983763 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 797 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241897553
MGI SNP Detail		 Chr1:119983814 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 848 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259464245
MGI SNP Detail		 Chr1:119983854 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 888 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227976103
MGI SNP Detail		 Chr1:119983893 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 927 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs48712530
MGI SNP Detail		 Chr1:119983936 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 970 bp downstream
 SNP A/G G G G G G A G A
rs252775474
MGI SNP Detail		 Chr1:119983969 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1003 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265421185
MGI SNP Detail		 Chr1:119984017 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1051 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230669807
MGI SNP Detail		 Chr1:119984036 Rr30107 within coordinates of
Rr371936 within coordinates of
Sctr within coordinates of
Tssr8396 1070 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254965565
MGI SNP Detail		 Chr1:119984104 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1138 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212741033
MGI SNP Detail		 Chr1:119984208 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1242 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48881615
MGI SNP Detail		 Chr1:119984268 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1302 bp downstream
 SNP C/T C C C C C T C C C C C C T C
rs248764238
MGI SNP Detail		 Chr1:119984434 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1468 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216692063
MGI SNP Detail		 Chr1:119984504 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1538 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs241045335
MGI SNP Detail		 Chr1:119984512 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1546 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248683544
MGI SNP Detail		 Chr1:119984520 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1554 bp downstream
 SNP A/G A G
rs580226779
MGI SNP Detail		 Chr1:119984571 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1605 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T T T T T
rs223234209
MGI SNP Detail		 Chr1:119984687 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1721 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236329222
MGI SNP Detail		 Chr1:119984947 Rr30107 within coordinates of
Sctr within coordinates of
Tssr8396 1981 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 85 of 85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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