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Mouse SNP Summary
Symbol
Name
ID 		Tssr8552
transcription start site region 8552
MGI:5936319

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50469751
MGI SNP Detail		 Chr1:130089715 Thsd7b within coordinates of
Tssr8552 1849 bp upstream
 SNP C/G G C
rs225572514
MGI SNP Detail		 Chr1:130089783 Thsd7b within coordinates of
Tssr8552 1781 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs48100498
MGI SNP Detail		 Chr1:130089797 Thsd7b within coordinates of
Tssr8552 1767 bp upstream
 SNP G G G
rs46290159
MGI SNP Detail		 Chr1:130089810 Thsd7b within coordinates of
Tssr8552 1754 bp upstream
 SNP A/G G A
rs51130516
MGI SNP Detail		 Chr1:130089861 Thsd7b within coordinates of
Tssr8552 1703 bp upstream
 SNP A A
rs51374322
MGI SNP Detail		 Chr1:130089905 Thsd7b within coordinates of
Tssr8552 1659 bp upstream
 SNP A/G A G G
rs212347128
MGI SNP Detail		 Chr1:130089943 Thsd7b within coordinates of
Tssr8552 1621 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C
rs225206611
MGI SNP Detail		 Chr1:130090304 Thsd7b within coordinates of
Tssr8552 1260 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A T A A A A A A A A A A A
rs254294250
MGI SNP Detail		 Chr1:130090436 Thsd7b within coordinates of
Tssr8552 1128 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs219615661
MGI SNP Detail		 Chr1:130090513 Thsd7b within coordinates of
Tssr8552 1051 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs238232002
MGI SNP Detail		 Chr1:130090530 Thsd7b within coordinates of
Tssr8552 1034 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs263423103
MGI SNP Detail		 Chr1:130090717 Thsd7b within coordinates of
Tssr8552 847 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs213680438
MGI SNP Detail		 Chr1:130090821 Thsd7b within coordinates of
Tssr8552 743 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs232291932
MGI SNP Detail		 Chr1:130090851 Thsd7b within coordinates of
Tssr8552 713 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248302879
MGI SNP Detail		 Chr1:130090919 Thsd7b within coordinates of
Tssr8552 645 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217868708
MGI SNP Detail		 Chr1:130090976 Thsd7b within coordinates of
Tssr8552 588 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs236605371
MGI SNP Detail		 Chr1:130091025 Thsd7b within coordinates of
Tssr8552 539 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580453685
MGI SNP Detail		 Chr1:130091056 Thsd7b within coordinates of
Tssr8552 508 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260120835
MGI SNP Detail		 Chr1:130091081 Thsd7b within coordinates of
Tssr8552 483 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263078372
MGI SNP Detail		 Chr1:130091085 Thsd7b within coordinates of
Tssr8552 479 bp upstream
 SNP T T T
rs245186107
MGI SNP Detail		 Chr1:130091156 Thsd7b within coordinates of
Tssr8552 408 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265631169
MGI SNP Detail		 Chr1:130091182 Thsd7b within coordinates of
Tssr8552 382 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33454306
MGI SNP Detail		 Chr1:130091203 Thsd7b within coordinates of
Tssr8552 361 bp upstream
 SNP C/T C C C C C C C C T T T
rs33454304
MGI SNP Detail		 Chr1:130091429 Thsd7b within coordinates of
Tssr8552 135 bp upstream
 SNP A/G G G G G G G G G A A A
rs255787992
MGI SNP Detail		 Chr1:130091434 Thsd7b within coordinates of
Tssr8552 130 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224747625
MGI SNP Detail		 Chr1:130091534 Thsd7b within coordinates of
Tssr8552 30 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33453422
MGI SNP Detail		 Chr1:130091754 Thsd7b within coordinates of
Tssr8552 183 bp downstream
 SNP C/T T T T T T T T T C C C
rs219607788
MGI SNP Detail		 Chr1:130091869 Thsd7b within coordinates of
Tssr8552 298 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C G C G C C G C C C C C G C G C G C C C C
rs583876109
MGI SNP Detail		 Chr1:130091900 Thsd7b within coordinates of
Tssr8552 329 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232594810
MGI SNP Detail		 Chr1:130091979 Thsd7b within coordinates of
Tssr8552 408 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs253481525
MGI SNP Detail		 Chr1:130092003 Thsd7b within coordinates of
Tssr8552 432 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229932826
MGI SNP Detail		 Chr1:130092212 Thsd7b within coordinates of
Tssr8552 641 bp downstream
 SNP T T T
rs232170984
MGI SNP Detail		 Chr1:130092285 Thsd7b within coordinates of
Tssr8552 714 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T A T A T T A T T T T T A T A T A T T T T
rs248220683
MGI SNP Detail		 Chr1:130092339 Thsd7b within coordinates of
Tssr8552 768 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T C T T C T C T T T C T C C T T T T
rs213098737
MGI SNP Detail		 Chr1:130092345 Thsd7b within coordinates of
Tssr8552 774 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239669151
MGI SNP Detail		 Chr1:130092449 Thsd7b within coordinates of
Tssr8552 878 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G C G G C G C G G G C G C G C G G G G
rs263704006
MGI SNP Detail		 Chr1:130092628 Thsd7b within coordinates of
Tssr8552 1057 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C T C C T C T C C C T C T C T C C C C
rs226511004
MGI SNP Detail		 Chr1:130092664 Thsd7b within coordinates of
Tssr8552 1093 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs239937120
MGI SNP Detail		 Chr1:130092730 Thsd7b within coordinates of
Tssr8552 1159 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C T C C T C T C C C T C T C C C C C C
rs253556063
MGI SNP Detail		 Chr1:130092731 Thsd7b within coordinates of
Tssr8552 1160 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219300462
MGI SNP Detail		 Chr1:130092738 Thsd7b within coordinates of
Tssr8552 1167 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239416460
MGI SNP Detail		 Chr1:130092740 Thsd7b within coordinates of
Tssr8552 1169 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G A G G A G A G G G A G A G A G G G G
rs255704412
MGI SNP Detail		 Chr1:130092782 Thsd7b within coordinates of
Tssr8552 1211 bp downstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G A G G G G
rs218703961
MGI SNP Detail		 Chr1:130092821 Thsd7b within coordinates of
Tssr8552 1250 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247118872
MGI SNP Detail		 Chr1:130092923 Thsd7b within coordinates of
Tssr8552 1352 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249925183
MGI SNP Detail		 Chr1:130092945 Thsd7b within coordinates of
Tssr8552 1374 bp downstream
 SNP C C C
rs231874724
MGI SNP Detail		 Chr1:130092950 Thsd7b within coordinates of
Tssr8552 1379 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217954157
MGI SNP Detail		 Chr1:130092956 Thsd7b within coordinates of
Tssr8552 1385 bp downstream
 SNP A A A
rs255853459
MGI SNP Detail		 Chr1:130092965 Thsd7b within coordinates of
Tssr8552 1394 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226426240
MGI SNP Detail		 Chr1:130092973 Thsd7b within coordinates of
Tssr8552 1402 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242433145
MGI SNP Detail		 Chr1:130092982 Thsd7b within coordinates of
Tssr8552 1411 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212958353
MGI SNP Detail		 Chr1:130092983 Thsd7b within coordinates of
Tssr8552 1412 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs242316740
MGI SNP Detail		 Chr1:130093036 Thsd7b within coordinates of
Tssr8552 1465 bp downstream
 SNP A/G A A A A A A A A G G A A A A A A A A A G G A G A A A A G A A G A A G G G A A G G G A A A G A G G G A A G G
rs218966961
MGI SNP Detail		 Chr1:130093052 Thsd7b within coordinates of
Tssr8552 1481 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs240219906
MGI SNP Detail		 Chr1:130093053 Thsd7b within coordinates of
Tssr8552 1482 bp downstream
 SNP A/T A T
rs253479134
MGI SNP Detail		 Chr1:130093054 Thsd7b within coordinates of
Tssr8552 1483 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs264306213
MGI SNP Detail		 Chr1:130093077 Thsd7b within coordinates of
Tssr8552 1506 bp downstream
 SNP A A A
rs232785683
MGI SNP Detail		 Chr1:130093089 Thsd7b within coordinates of
Tssr8552 1518 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249321883
MGI SNP Detail		 Chr1:130093127 Thsd7b within coordinates of
Tssr8552 1556 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs33453420
MGI SNP Detail		 Chr1:130093163 Thsd7b within coordinates of
Tssr8552 1592 bp downstream
 SNP A/G A A A A A A A A G G G
rs234968425
MGI SNP Detail		 Chr1:130093197 Thsd7b within coordinates of
Tssr8552 1626 bp downstream
 SNP A A A
rs264294035
MGI SNP Detail		 Chr1:130093218 Thsd7b within coordinates of
Tssr8552 1647 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223893648
MGI SNP Detail		 Chr1:130093220 Thsd7b within coordinates of
Tssr8552 1649 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251242964
MGI SNP Detail		 Chr1:130093250 Thsd7b within coordinates of
Tssr8552 1679 bp downstream
 SNP G G G
rs33453418
MGI SNP Detail		 Chr1:130093258 Thsd7b within coordinates of
Tssr8552 1687 bp downstream
 SNP C/T C C C C C C C C T T T
rs226479507
MGI SNP Detail		 Chr1:130093331 Thsd7b within coordinates of
Tssr8552 1760 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242634147
MGI SNP Detail		 Chr1:130093346 Thsd7b within coordinates of
Tssr8552 1775 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254694330
MGI SNP Detail		 Chr1:130093444 Thsd7b within coordinates of
Tssr8552 1873 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233157117
MGI SNP Detail		 Chr1:130093456 Thsd7b within coordinates of
Tssr8552 1885 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260387719
MGI SNP Detail		 Chr1:130093489 Thsd7b within coordinates of
Tssr8552 1918 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215968741
MGI SNP Detail		 Chr1:130093534 Thsd7b within coordinates of
Tssr8552 1963 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33453416
MGI SNP Detail		 Chr1:130093567 Thsd7b within coordinates of
Tssr8552 1996 bp downstream
 SNP G/T T T T T T T T T G G G
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Showing SNP(s) 1 - 72 of 72
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory