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Mouse SNP Summary
Symbol
Name
ID 		Tssr9044
transcription start site region 9044
MGI:5936811

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217754757
MGI SNP Detail		 Chr1:136057297 Gm15850 within coordinates of
Tssr9044 1884 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46787278
MGI SNP Detail		 Chr1:136057299 Gm15850 within coordinates of
Tssr9044 1882 bp upstream
 SNP A/T A T T A
rs46414992
MGI SNP Detail		 Chr1:136057313 Gm15850 within coordinates of
Tssr9044 1868 bp upstream
 SNP A/G A G G A
rs30892557
MGI SNP Detail		 Chr1:136057333 Gm15850 within coordinates of
Tssr9044 1848 bp upstream
 SNP C/T C T T T T T T C T C C T T T T
rs243645842
MGI SNP Detail		 Chr1:136057364 Gm15850 within coordinates of
Tssr9044 1817 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs30892556
MGI SNP Detail		 Chr1:136057367 Gm15850 within coordinates of
Tssr9044 1814 bp upstream
 SNP C/T T C C C C C C C T C C C
rs221866668
MGI SNP Detail		 Chr1:136057405 Gm15850 within coordinates of
Tssr9044 1776 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246223708
MGI SNP Detail		 Chr1:136057441 Gm15850 within coordinates of
Tssr9044 1740 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30892555
MGI SNP Detail		 Chr1:136057490 Gm15850 within coordinates of
Tssr9044 1691 bp upstream
 SNP A/G G G G G G A G G G A G G
rs229205992
MGI SNP Detail		 Chr1:136057525 Gm15850 within coordinates of
Tssr9044 1656 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240772001
MGI SNP Detail		 Chr1:136057647 Gm15850 within coordinates of
Tssr9044 1534 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30892554
MGI SNP Detail		 Chr1:136057648 Gm15850 within coordinates of
Tssr9044 1533 bp upstream
 SNP G/T G G G G T G G G G G G G
rs254602059
MGI SNP Detail		 Chr1:136057651 Gm15850 within coordinates of
Tssr9044 1530 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227695179
MGI SNP Detail		 Chr1:136057732 Gm15850 within coordinates of
Tssr9044 1449 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256384344
MGI SNP Detail		 Chr1:136057741 Gm15850 within coordinates of
Tssr9044 1440 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262452410
MGI SNP Detail		 Chr1:136057757 Gm15850 within coordinates of
Tssr9044 1424 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A G A A A
rs233348625
MGI SNP Detail		 Chr1:136057758 Gm15850 within coordinates of
Tssr9044 1423 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C T C C C
rs252553026
MGI SNP Detail		 Chr1:136057769 Gm15850 within coordinates of
Tssr9044 1412 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C T C C C
rs217654156
MGI SNP Detail		 Chr1:136057841 Gm15850 within coordinates of
Tssr9044 1340 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs235828936
MGI SNP Detail		 Chr1:136057844 Gm15850 within coordinates of
Tssr9044 1337 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244596870
MGI SNP Detail		 Chr1:136057869 Gm15850 within coordinates of
Tssr9044 1312 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30891903
MGI SNP Detail		 Chr1:136057959 Gm15850 within coordinates of
Tssr9044 1222 bp upstream
 SNP C/T C C C C C T C C C T C C
rs234311622
MGI SNP Detail		 Chr1:136058021 Gm15850 within coordinates of
Tssr9044 1160 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262284769
MGI SNP Detail		 Chr1:136058024 Gm15850 within coordinates of
Tssr9044 1157 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222343817
MGI SNP Detail		 Chr1:136058129 Gm15850 within coordinates of
Tssr9044 1052 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240779108
MGI SNP Detail		 Chr1:136058167 Gm15850 within coordinates of
Tssr9044 1014 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs30891902
MGI SNP Detail		 Chr1:136058248 Gm15850 within coordinates of
Tssr9044 933 bp upstream
 SNP C/T C C C C C C T C C C T C C
rs584395915
MGI SNP Detail		 Chr1:136058431 Gm15850 within coordinates of
Tssr9044 750 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs578833509
MGI SNP Detail		 Chr1:136058455 Gm15850 within coordinates of
Tssr9044 726 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs222509345
MGI SNP Detail		 Chr1:136058528 Gm15850 within coordinates of
Tssr9044 653 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240735562
MGI SNP Detail		 Chr1:136058552 Gm15850 within coordinates of
Tssr9044 629 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254572236
MGI SNP Detail		 Chr1:136058562 Gm15850 within coordinates of
Tssr9044 619 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220121775
MGI SNP Detail		 Chr1:136058664 Gm15850 within coordinates of
Tssr9044 517 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30891901
MGI SNP Detail		 Chr1:136058698 Gm15850 within coordinates of
Tssr9044 483 bp upstream
 SNP G/T G T T T T G G G T T T T
rs6259595
MGI SNP Detail		 Chr1:136058848 Gm15850 within coordinates of
Rr396320 within coordinates of
Tssr9044 333 bp upstream
 SNP C/T C T
rs232538810
MGI SNP Detail		 Chr1:136058870 Cpgi805 within coordinates of
Gm15850 within coordinates of
Rr396320 within coordinates of
Tssr9044 311 bp upstream
 SNP A/G A A A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G
rs6259741
MGI SNP Detail		 Chr1:136058932 Cpgi805 within coordinates of
Rr396320 within coordinates of
Tssr9044 249 bp upstream
 SNP C/T C T T C C C T
rs30891900
MGI SNP Detail		 Chr1:136058981 Cpgi805 within coordinates of
Rr396320 within coordinates of
Tssr9044 200 bp upstream
 SNP A/G A G G G G G G G A G G G
rs228729748
MGI SNP Detail		 Chr1:136059058 Cpgi805 within coordinates of
Rr396320 within coordinates of
Tssr9044 123 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs47642684
MGI SNP Detail		 Chr1:136059163 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9043 within coordinates of
Tssr9044 18 bp upstream
 SNP A/G A G G
rs30891899
MGI SNP Detail		 Chr1:136059205 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 within coordinates of
 SNP A/G G G G G G G G G G G G A
rs212374376
MGI SNP Detail		 Chr1:136059452 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 220 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239499206
MGI SNP Detail		 Chr1:136059578 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 346 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251169881
MGI SNP Detail		 Chr1:136059711 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 479 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30891898
MGI SNP Detail		 Chr1:136059779 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 547 bp downstream
 SNP C/T C C C C C C C C C C C T
rs30891897
MGI SNP Detail		 Chr1:136059829 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 597 bp downstream
 SNP A/G A G G G G G G G G A G G G
rs250997645
MGI SNP Detail		 Chr1:136059987 Cpgi805 within coordinates of
Kif21b within coordinates of
Tssr9044 755 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs222476458
MGI SNP Detail		 Chr1:136060054 Kif21b within coordinates of
Tssr9044 822 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs582520577
MGI SNP Detail		 Chr1:136060094 Kif21b within coordinates of
Tssr9044 862 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234156671
MGI SNP Detail		 Chr1:136060258 Kif21b within coordinates of
Tssr9044 1026 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248820374
MGI SNP Detail		 Chr1:136060327 Kif21b within coordinates of
Tssr9044 1095 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30891896
MGI SNP Detail		 Chr1:136060329 Kif21b within coordinates of
Tssr9044 1097 bp downstream
 SNP A/T T A A A A T T T T T A T A
rs246889328
MGI SNP Detail		 Chr1:136060359 Kif21b within coordinates of
Tssr9044 1127 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586257865
MGI SNP Detail		 Chr1:136060461 Kif21b within coordinates of
Tssr9044 1229 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30891895
MGI SNP Detail		 Chr1:136060596 Kif21b within coordinates of
Tssr9044 1364 bp downstream
 SNP A/G G G G G G G G G G G G A
rs240613556
MGI SNP Detail		 Chr1:136060610 Kif21b within coordinates of
Tssr9044 1378 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261395593
MGI SNP Detail		 Chr1:136060617 Kif21b within coordinates of
Tssr9044 1385 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs30891894
MGI SNP Detail		 Chr1:136060682 Kif21b within coordinates of
Tssr9044 1450 bp downstream
 SNP C/G G G G G G G G G G G G G C
rs238342519
MGI SNP Detail		 Chr1:136060752 Kif21b within coordinates of
Tssr9044 1520 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30891003
MGI SNP Detail		 Chr1:136060756 Kif21b within coordinates of
Tssr9044 1524 bp downstream
 SNP A/G A A A A A G A A A A G
rs231178520
MGI SNP Detail		 Chr1:136060772 Kif21b within coordinates of
Tssr9044 1540 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30891002
MGI SNP Detail		 Chr1:136060798 Kif21b within coordinates of
Tssr13915 within coordinates of
Tssr9044 1566 bp downstream
 SNP C/G C C C C C C C C C C C G
rs217349666
MGI SNP Detail		 Chr1:136060829 Kif21b within coordinates of
Tssr9044 1597 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T
rs227238915
MGI SNP Detail		 Chr1:136060889 Kif21b within coordinates of
Tssr9044 1657 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C C T T T
rs245007762
MGI SNP Detail		 Chr1:136060924 Kif21b within coordinates of
Tssr9044 1692 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G
rs217152011
MGI SNP Detail		 Chr1:136060968 Kif21b within coordinates of
Tssr9044 1736 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs30891001
MGI SNP Detail		 Chr1:136061049 Kif21b within coordinates of
Tssr9044 1817 bp downstream
 SNP C/T C C C C C T C C T C
rs30891000
MGI SNP Detail		 Chr1:136061050 Kif21b within coordinates of
Tssr9044 1818 bp downstream
 SNP A/G G G G G G G G G G G G A
rs212002079
MGI SNP Detail		 Chr1:136061112 Kif21b within coordinates of
Tssr9044 1880 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs236894855
MGI SNP Detail		 Chr1:136061118 Kif21b within coordinates of
Tssr9044 1886 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261983144
MGI SNP Detail		 Chr1:136061126 Kif21b within coordinates of
Tssr9044 1894 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224985467
MGI SNP Detail		 Chr1:136061156 Kif21b within coordinates of
Tssr9044 1924 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240577648
MGI SNP Detail		 Chr1:136061202 Kif21b within coordinates of
Tssr9044 1970 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580403909
MGI SNP Detail		 Chr1:136061214 Kif21b within coordinates of
Tssr9044 1982 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Showing SNP(s) 1 - 74 of 74
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory