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Mouse SNP Summary
Symbol
Name
ID 		Tssr9166
transcription start site region 9166
MGI:5936933

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30936315
MGI SNP Detail		 Chr1:138889458 Gm37045 within coordinates of
Tssr9166 1909 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs30936314
MGI SNP Detail		 Chr1:138889519 Gm37045 within coordinates of
Tssr9166 1848 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs266064427
MGI SNP Detail		 Chr1:138889565 Gm37045 within coordinates of
Tssr9166 1802 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225543882
MGI SNP Detail		 Chr1:138889643 Gm37045 within coordinates of
Tssr9166 1724 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30935673
MGI SNP Detail		 Chr1:138889693 Gm37045 within coordinates of
Tssr9166 1674 bp upstream
 SNP G/T G G G G G G T G G G G G G G G
rs253632762
MGI SNP Detail		 Chr1:138889721 Gm37045 within coordinates of
Tssr9166 1646 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30935672
MGI SNP Detail		 Chr1:138889772 Gm37045 within coordinates of
Tssr9166 1595 bp upstream
 SNP C/T C C C C C T C C C T C C T C
rs30935671
MGI SNP Detail		 Chr1:138889815 Gm37045 within coordinates of
Tssr9166 1552 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs30935670
MGI SNP Detail		 Chr1:138889847 Gm37045 within coordinates of
Tssr9166 1520 bp upstream
 SNP A/T A A A A A A A A A A T A A T A
rs30935669
MGI SNP Detail		 Chr1:138889895 Gm37045 within coordinates of
Tssr9166 1472 bp upstream
 SNP A/T A A A A A A T A A A T A A T A
rs30935668
MGI SNP Detail		 Chr1:138889928 Gm37045 within coordinates of
Tssr9166 1439 bp upstream
 SNP A/T A A A A A A T A A A A A A A A
rs218276765
MGI SNP Detail		 Chr1:138889962 Gm37045 within coordinates of
Tssr9166 1405 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30935667
MGI SNP Detail		 Chr1:138889964 Gm37045 within coordinates of
Tssr9166 1403 bp upstream
 SNP C/G C C C C C C C C C G C C G C
rs243571369
MGI SNP Detail		 Chr1:138889965 Gm37045 within coordinates of
Tssr9166 1402 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G G G G G T T G G
rs30935666
MGI SNP Detail		 Chr1:138889998 Gm37045 within coordinates of
Tssr9166 1369 bp upstream
 SNP G/T T T T T T T G T T T G T T G T
rs30935665
MGI SNP Detail		 Chr1:138890089 Gm37045 within coordinates of
Tssr9166 1278 bp upstream
 SNP C/T T T T T T T C T T T T T T T T
rs231886903
MGI SNP Detail		 Chr1:138890104 Gm37045 within coordinates of
Tssr9166 1263 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30935664
MGI SNP Detail		 Chr1:138890108 Gm37045 within coordinates of
Tssr9166 1259 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs224952478
MGI SNP Detail		 Chr1:138890166 Gm37045 within coordinates of
Tssr9166 1201 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239762861
MGI SNP Detail		 Chr1:138890255 Gm37045 within coordinates of
Tssr9166 1112 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A A T T A
rs260798998
MGI SNP Detail		 Chr1:138890445 Gm37045 within coordinates of
Tssr9166 922 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C C C
rs225881093
MGI SNP Detail		 Chr1:138890651 Tssr9166 716 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T C T T C
rs236435039
MGI SNP Detail		 Chr1:138890723 Tssr9166 644 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A
rs253732962
MGI SNP Detail		 Chr1:138890831 Cpgi831 within coordinates of
Tssr9166 536 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A
rs219774873
MGI SNP Detail		 Chr1:138890858 Cpgi831 within coordinates of
Tssr9166 509 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237230270
MGI SNP Detail		 Chr1:138890936 Cpgi831 within coordinates of
Tssr9166 431 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30693453
MGI SNP Detail		 Chr1:138890971 Cpgi831 within coordinates of
Tssr9166 396 bp upstream
 SNP C/T T C T C T
rs32376923
MGI SNP Detail		 Chr1:138890980 Cpgi831 within coordinates of
Tssr9166 387 bp upstream
 SNP A/G G A G A G
rs260434631
MGI SNP Detail		 Chr1:138891049 Cpgi831 within coordinates of
Tssr9166 318 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264172656
MGI SNP Detail		 Chr1:138891189 Cpgi831 within coordinates of
Tssr9165 within coordinates of
Tssr9166 178 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32667495
MGI SNP Detail		 Chr1:138891190 Cpgi831 within coordinates of
Tssr9165 within coordinates of
Tssr9166 177 bp upstream
 SNP C/T T C T C T
rs243676906
MGI SNP Detail		 Chr1:138891211 Cpgi831 within coordinates of
Tssr9166 156 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214606061
MGI SNP Detail		 Chr1:138891222 Cpgi831 within coordinates of
Tssr9166 145 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231839172
MGI SNP Detail		 Chr1:138891293 Cpgi831 within coordinates of
Tssr9166 74 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247316661
MGI SNP Detail		 Chr1:138891322 Cpgi831 within coordinates of
Tssr9166 45 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs217091692
MGI SNP Detail		 Chr1:138891324 Cpgi831 within coordinates of
Tssr9166 43 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237874970
MGI SNP Detail		 Chr1:138891351 Cpgi831 within coordinates of
Tssr9166 16 bp upstream
 SNP A/C C C A C C C C A C A C C C C C C A A A A A A A A A C A C C A C C C C C C A C C C C C C C A A C A A
rs264218078
MGI SNP Detail		 Chr1:138891475 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 53 bp downstream
Tssr9167 within coordinates of
 SNP C/T C T C C C C T C T C C C C T C T T C C C C C C C C C C C C C C C T
rs217809375
MGI SNP Detail		 Chr1:138891585 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 163 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230632601
MGI SNP Detail		 Chr1:138891590 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 168 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3710420
MGI SNP Detail		 Chr1:138891687 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 265 bp downstream
 SNP C/T T C
rs219872845
MGI SNP Detail		 Chr1:138891721 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 299 bp downstream
 SNP A/C/G G G G G G G G G G G G A G G C G G G G G G G G G C G G G G G G G G G
rs3711557
MGI SNP Detail		 Chr1:138891848 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 426 bp downstream
 SNP G/T T G T G
rs3711599
MGI SNP Detail		 Chr1:138891869 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 447 bp downstream
 SNP C/T C T C T
rs212063125
MGI SNP Detail		 Chr1:138891872 Cpgi831 within coordinates of
Dennd1b within coordinates of
Tssr9166 450 bp downstream
 SNP A/G A G
rs248728441
MGI SNP Detail		 Chr1:138892214 Dennd1b within coordinates of
Rr396345 within coordinates of
Tssr9166 792 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs266033652
MGI SNP Detail		 Chr1:138892271 Dennd1b within coordinates of
Rr396345 within coordinates of
Tssr9166 849 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229145191
MGI SNP Detail		 Chr1:138892351 Dennd1b within coordinates of
Rr396345 within coordinates of
Tssr9166 929 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237585147
MGI SNP Detail		 Chr1:138892364 Dennd1b within coordinates of
Tssr9166 942 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581093780
MGI SNP Detail		 Chr1:138892396 Dennd1b within coordinates of
Tssr9166 974 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258462386
MGI SNP Detail		 Chr1:138892692 Dennd1b within coordinates of
Tssr9166 1270 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225968073
MGI SNP Detail		 Chr1:138892798 Dennd1b within coordinates of
Tssr9166 1376 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584279036
MGI SNP Detail		 Chr1:138892960 Dennd1b within coordinates of
Tssr9166 1538 bp downstream
 SNP G/T G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G G G G G T G G
rs247281337
MGI SNP Detail		 Chr1:138892973 Dennd1b within coordinates of
Tssr9166 1551 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C C A A A A A C A A A A A A C A A A A A A A C A A
rs579127557
MGI SNP Detail		 Chr1:138893053 Dennd1b within coordinates of
Tssr9166 1631 bp downstream
 SNP G/T G G G G G T T G G G G T G T G G G G G G G G G G G T T G G G G G T G T G G G G G G
rs215793342
MGI SNP Detail		 Chr1:138893192 Dennd1b within coordinates of
Tssr9166 1770 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs235086220
MGI SNP Detail		 Chr1:138893327 Dennd1b within coordinates of
Tssr9166 1905 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G A G G G G G G G G A G G G
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Showing SNP(s) 1 - 57 of 57
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory