About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr9166
transcription start site region 9166
MGI:5936933

<< first < prev1 next > last >>
Showing SNP(s) 1 - 57 of 57

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30936315
MGI SNP Detail		 Chr1:138889458 Gm37045 within coordinates of
Tssr9166 1909 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs30936314
MGI SNP Detail		 Chr1:138889519 Gm37045 within coordinates of
Tssr9166 1848 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs266064427
MGI SNP Detail		 Chr1:138889565 Gm37045 within coordinates of
Tssr9166 1802 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225543882
MGI SNP Detail		 Chr1:138889643 Gm37045 within coordinates of
Tssr9166 1724 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30935673
MGI SNP Detail		 Chr1:138889693 Gm37045 within coordinates of
Tssr9166 1674 bp upstream
 SNP G/T G G G G G G T G G G G G G G G
rs253632762
MGI SNP Detail		 Chr1:138889721 Gm37045 within coordinates of
Tssr9166 1646 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30935672
MGI SNP Detail		 Chr1:138889772 Gm37045 within coordinates of
Tssr9166 1595 bp upstream
 SNP C/T C C C C C T C C C T C C T C
rs30935671
MGI SNP Detail		 Chr1:138889815 Gm37045 within coordinates of
Tssr9166 1552 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs30935670
MGI SNP Detail		 Chr1:138889847 Gm37045 within coordinates of
Tssr9166 1520 bp upstream
 SNP A/T A A A A A A A A A A T A A T A
rs30935669
MGI SNP Detail		 Chr1:138889895 Gm37045 within coordinates of
Tssr9166 1472 bp upstream
 SNP A/T A A A A A A T A A A T A A T A
rs30935668
MGI SNP Detail		 Chr1:138889928 Gm37045 within coordinates of
Tssr9166 1439 bp upstream
 SNP A/T A A A A A A T A A A A A A A A
rs218276765
MGI SNP Detail		 Chr1:138889962 Gm37045 within coordinates of
Tssr9166 1405 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30935667
MGI SNP Detail		 Chr1:138889964 Gm37045 within coordinates of
Tssr9166 1403 bp upstream
 SNP C/G C C C C C C C C C G C C G C
rs243571369
MGI SNP Detail		 Chr1:138889965 Gm37045 within coordinates of
Tssr9166 1402 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G G G G G G G G T T G G
rs30935666
MGI SNP Detail		 Chr1:138889998 Gm37045 within coordinates of
Tssr9166 1369 bp upstream
 SNP G/T T T T T T T G T T T G T T G T
rs30935665
MGI SNP Detail		 Chr1:138890089 Gm37045 within coordinates of
Tssr9166 1278 bp upstream
 SNP C/T T T T T T T C T T T T T T T T
rs231886903
MGI SNP Detail		 Chr1:138890104 Gm37045 within coordinates of
Tssr9166 1263 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30935664
MGI SNP Detail		 Chr1:138890108 Gm37045 within coordinates of
Tssr9166 1259 bp upstream
 SNP A/G A A A A A A G A A A G A A G A
rs224952478
MGI SNP Detail		 Chr1:138890166 Gm37045 within coordinates of
Tssr9166 1201 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239762861
MGI SNP Detail		 Chr1:138890255 Gm37045 within coordinates of
Tssr9166 1112 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A A T T A
rs260798998
MGI SNP Detail		 Chr1:138890445 Gm37045 within coordinates of
Rr28649 within coordinates of
Tssr9166 922 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C C C
rs225881093
MGI SNP Detail		 Chr1:138890651 Rr28649 within coordinates of
Tssr9166 716 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T C T T C
rs236435039
MGI SNP Detail		 Chr1:138890723 Rr28649 within coordinates of
Tssr9166 644 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A
rs253732962
MGI SNP Detail		 Chr1:138890831 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 536 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A
rs219774873
MGI SNP Detail		 Chr1:138890858 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 509 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237230270
MGI SNP Detail		 Chr1:138890936 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 431 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30693453
MGI SNP Detail		 Chr1:138890971 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 396 bp upstream
 SNP C/T T C T C T
rs32376923
MGI SNP Detail		 Chr1:138890980 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 387 bp upstream
 SNP A/G G A G A G
rs260434631
MGI SNP Detail		 Chr1:138891049 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 318 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264172656
MGI SNP Detail		 Chr1:138891189 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9165 within coordinates of
Tssr9166 178 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32667495
MGI SNP Detail		 Chr1:138891190 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9165 within coordinates of
Tssr9166 177 bp upstream
 SNP C/T T C T C T
rs243676906
MGI SNP Detail		 Chr1:138891211 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 156 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214606061
MGI SNP Detail		 Chr1:138891222 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 145 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231839172
MGI SNP Detail		 Chr1:138891293 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 74 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247316661
MGI SNP Detail		 Chr1:138891322 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 45 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs217091692
MGI SNP Detail		 Chr1:138891324 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 43 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237874970
MGI SNP Detail		 Chr1:138891351 Cpgi831 within coordinates of
Rr28649 within coordinates of
Tssr9166 16 bp upstream
 SNP A/C C C A C C C C A C A C C C C C C A A A A A A A A A C A C C A C C C C C C A C C C C C C C A A C A A
rs264218078
MGI SNP Detail		 Chr1:138891475 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 53 bp downstream
Tssr9167 within coordinates of
 SNP C/T C T C C C C T C T C C C C T C T T C C C C C C C C C C C C C C C T
rs217809375
MGI SNP Detail		 Chr1:138891585 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 163 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230632601
MGI SNP Detail		 Chr1:138891590 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 168 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3710420
MGI SNP Detail		 Chr1:138891687 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 265 bp downstream
 SNP C/T T C
rs219872845
MGI SNP Detail		 Chr1:138891721 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 299 bp downstream
 SNP A/C/G G G G G G G G G G G G A G G C G G G G G G G G G C G G G G G G G G G
rs3711557
MGI SNP Detail		 Chr1:138891848 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 426 bp downstream
 SNP G/T T G T G
rs3711599
MGI SNP Detail		 Chr1:138891869 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 447 bp downstream
 SNP C/T C T C T
rs212063125
MGI SNP Detail		 Chr1:138891872 Cpgi831 within coordinates of
Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 450 bp downstream
 SNP A/G A G
rs248728441
MGI SNP Detail		 Chr1:138892214 Dennd1b within coordinates of
Rr28649 within coordinates of
Rr396345 within coordinates of
Tssr9166 792 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs266033652
MGI SNP Detail		 Chr1:138892271 Dennd1b within coordinates of
Rr28649 within coordinates of
Rr396345 within coordinates of
Tssr9166 849 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229145191
MGI SNP Detail		 Chr1:138892351 Dennd1b within coordinates of
Rr28649 within coordinates of
Rr396345 within coordinates of
Tssr9166 929 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237585147
MGI SNP Detail		 Chr1:138892364 Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 942 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581093780
MGI SNP Detail		 Chr1:138892396 Dennd1b within coordinates of
Rr28649 within coordinates of
Tssr9166 974 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258462386
MGI SNP Detail		 Chr1:138892692 Dennd1b within coordinates of
Rr28650 within coordinates of
Tssr9166 1270 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225968073
MGI SNP Detail		 Chr1:138892798 Dennd1b within coordinates of
Rr28650 within coordinates of
Tssr9166 1376 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584279036
MGI SNP Detail		 Chr1:138892960 Dennd1b within coordinates of
Tssr9166 1538 bp downstream
 SNP G/T G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G G G G G T G G
rs247281337
MGI SNP Detail		 Chr1:138892973 Dennd1b within coordinates of
Tssr9166 1551 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C C A A A A A C A A A A A A C A A A A A A A C A A
rs579127557
MGI SNP Detail		 Chr1:138893053 Dennd1b within coordinates of
Tssr9166 1631 bp downstream
 SNP G/T G G G G G T T G G G G T G T G G G G G G G G G G G T T G G G G G T G T G G G G G G
rs215793342
MGI SNP Detail		 Chr1:138893192 Dennd1b within coordinates of
Tssr9166 1770 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs235086220
MGI SNP Detail		 Chr1:138893327 Dennd1b within coordinates of
Tssr9166 1905 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G A G G G G G G G G A G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 57 of 57
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...