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Mouse SNP Summary
Symbol
Name
ID 		Tssr9235
transcription start site region 9235
MGI:5937002

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Showing SNP(s) 1 - 67 of 67

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33663004
MGI SNP Detail		 Chr1:149976469 Ptgs2 within coordinates of
Tssr9235 1968 bp upstream
 SNP A/T A A A A T A A A A A A T A A A T A
rs33662213
MGI SNP Detail		 Chr1:149976531 Ptgs2 within coordinates of
Tssr9235 1906 bp upstream
 SNP A/G A A A A G A A A A A A G A A A G A
rs33662212
MGI SNP Detail		 Chr1:149976558 Ptgs2 within coordinates of
Tssr9235 1879 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs587541687
MGI SNP Detail		 Chr1:149976889 Ptgs2 within coordinates of
Tssr9235 1548 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs581172414
MGI SNP Detail		 Chr1:149976921 Ptgs2 within coordinates of
Tssr9235 1516 bp upstream
 SNP A/G G G G G G G G G A G G G G G G G G G G A G G A G G G G A G G G G G A G A G G G G G G G G G G G G G G G
rs223600471
MGI SNP Detail		 Chr1:149977136 Ptgs2 within coordinates of
Tssr9235 1301 bp upstream
 SNP C/T C T
rs247706928
MGI SNP Detail		 Chr1:149977137 Ptgs2 within coordinates of
Tssr9235 1300 bp upstream
 SNP A/G A G
rs583703457
MGI SNP Detail		 Chr1:149977163 Ptgs2 within coordinates of
Tssr9235 1274 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586428904
MGI SNP Detail		 Chr1:149977173 Ptgs2 within coordinates of
Tssr9235 1264 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581118437
MGI SNP Detail		 Chr1:149977185 Ptgs2 within coordinates of
Tssr9235 1252 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584771209
MGI SNP Detail		 Chr1:149977212 Ptgs2 within coordinates of
Tssr9235 1225 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32559831
MGI SNP Detail		 Chr1:149977252 Ptgs2 within coordinates of
Tssr9235 1185 bp upstream
 SNP A/T A T A A A T A A T A T T A A A A A A
rs30798100
MGI SNP Detail		 Chr1:149977273 Ptgs2 within coordinates of
Tssr9235 1164 bp upstream
 SNP C/G C G C C G G C G G C G G G C C G G C
rs33662211
MGI SNP Detail		 Chr1:149977304 Ptgs2 within coordinates of
Tssr9235 1133 bp upstream
 SNP C/G G G G G C G G G G G C G G G C G
rs33662210
MGI SNP Detail		 Chr1:149977444 Ptgs2 within coordinates of
Tssr9235 993 bp upstream
 SNP A/G G G G G A G G G G G G A G G G A G
rs33662209
MGI SNP Detail		 Chr1:149977586 Ptgs2 within coordinates of
Tssr9235 851 bp upstream
 SNP C/T T T T T T T C T T T T T T C T
rs578377989
MGI SNP Detail		 Chr1:149977608 Ptgs2 within coordinates of
Tssr9235 829 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs580920810
MGI SNP Detail		 Chr1:149977696 Ptgs2 within coordinates of
Tssr9235 741 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs50060890
MGI SNP Detail		 Chr1:149977809 Ptgs2 within coordinates of
Tssr9230 within coordinates of
Tssr9235 628 bp upstream
 SNP C/T T C C
rs33662208
MGI SNP Detail		 Chr1:149977848 Ptgs2 within coordinates of
Tssr9230 within coordinates of
Tssr9235 589 bp upstream
 SNP A/C C C C C A C C C C C C A C C C A C
rs33662207
MGI SNP Detail		 Chr1:149978052 Ptgs2 within coordinates of
Tssr9235 385 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs245659846
MGI SNP Detail		 Chr1:149978214 Ptgs2 within coordinates of
Tssr9235 223 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579365992
MGI SNP Detail		 Chr1:149978232 Ptgs2 within coordinates of
Tssr9235 205 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs33662206
MGI SNP Detail		 Chr1:149978243 Ptgs2 within coordinates of
Tssr9235 194 bp upstream
 SNP A/G G G G G A G A G G G G A G G A A G
rs220519227
MGI SNP Detail		 Chr1:149978247 Ptgs2 within coordinates of
Tssr9235 190 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33662205
MGI SNP Detail		 Chr1:149978332 Ptgs2 within coordinates of
Tssr9235 105 bp upstream
 SNP A/G A A A A A A A A A A A G A
rs33662204
MGI SNP Detail		 Chr1:149978336 Ptgs2 within coordinates of
Tssr9235 101 bp upstream
 SNP A/T A A A A T A T A A A A T A A T A
rs229027859
MGI SNP Detail		 Chr1:149978337 Ptgs2 within coordinates of
Tssr9235 100 bp upstream
 SNP C/T C T
rs32774401
MGI SNP Detail		 Chr1:149978648 Ptgs2 within coordinates of
Tssr9235 192 bp downstream
 SNP A/G A A G A A G G A G G A G G G A A G G A
rs33668980
MGI SNP Detail		 Chr1:149978701 Ptgs2 within coordinates of
Tssr9235 245 bp downstream
 SNP A/C C C C C C A C C C C A C C A A C
rs264664782
MGI SNP Detail		 Chr1:149978950 Ptgs2 within coordinates of
Tssr9235 494 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs31523808
MGI SNP Detail		 Chr1:149978954 Ptgs2 within coordinates of
Tssr9235 498 bp downstream
 SNP G/T T G T T G G T G G T G G G T T G T
rs255460153
MGI SNP Detail		 Chr1:149978968 Ptgs2 within coordinates of
Tssr9235 512 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs33668979
MGI SNP Detail		 Chr1:149978991 Ptgs2 within coordinates of
Tssr9235 535 bp downstream
 SNP A/G G G G G A G G G G G G A G G G A G
rs214619550
MGI SNP Detail		 Chr1:149978998 Ptgs2 within coordinates of
Tssr9235 542 bp downstream
Tssr9247 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs33668978
MGI SNP Detail		 Chr1:149979051 Ptgs2 within coordinates of
Tssr9235 595 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs582248329
MGI SNP Detail		 Chr1:149979073 Ptgs2 within coordinates of
Tssr9235 617 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs33668977
MGI SNP Detail		 Chr1:149979106 Ptgs2 within coordinates of
Tssr9235 650 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs586067093
MGI SNP Detail		 Chr1:149979116 Ptgs2 within coordinates of
Tssr9235 660 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578564337
MGI SNP Detail		 Chr1:149979120 Ptgs2 within coordinates of
Tssr9235 664 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582255143
MGI SNP Detail		 Chr1:149979123 Ptgs2 within coordinates of
Tssr9235 667 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585987724
MGI SNP Detail		 Chr1:149979216 Ptgs2 within coordinates of
Tssr9235 760 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579554417
MGI SNP Detail		 Chr1:149979222 Ptgs2 within coordinates of
Tssr9235 766 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245829452
MGI SNP Detail		 Chr1:149979235 Ptgs2 within coordinates of
Tssr9235 779 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs216558711
MGI SNP Detail		 Chr1:149979238 Ptgs2 within coordinates of
Tssr9235 782 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs583173125
MGI SNP Detail		 Chr1:149979280 Ptgs2 within coordinates of
Tssr9235 824 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235140833
MGI SNP Detail		 Chr1:149979284 Ptgs2 within coordinates of
Tssr9235 828 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255482255
MGI SNP Detail		 Chr1:149979330 Ptgs2 within coordinates of
Tssr9235 874 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T G G G G
rs212829587
MGI SNP Detail		 Chr1:149979413 Ptgs2 within coordinates of
Tssr9235 957 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C
rs235895802
MGI SNP Detail		 Chr1:149979536 Ptgs2 within coordinates of
Tssr9235 1080 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262323442
MGI SNP Detail		 Chr1:149979539 Ptgs2 within coordinates of
Tssr9235 1083 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs220855866
MGI SNP Detail		 Chr1:149979549 Ptgs2 within coordinates of
Tssr9235 1093 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs213602173
MGI SNP Detail		 Chr1:149979583 Ptgs2 within coordinates of
Tssr9235 1127 bp downstream
 SNP C/T T C
rs585875129
MGI SNP Detail		 Chr1:149979704 Ptgs2 within coordinates of
Tssr9235 1248 bp downstream
Tssr9251 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241085722
MGI SNP Detail		 Chr1:149979826 Ptgs2 within coordinates of
Tssr9235 1370 bp downstream
Tssr9255 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs253816934
MGI SNP Detail		 Chr1:149979906 Ptgs2 within coordinates of
Tssr9235 1450 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs33668976
MGI SNP Detail		 Chr1:149979934 Ptgs2 within coordinates of
Tssr9235 1478 bp downstream
 SNP A/T A A A T A T A A A T A A A
rs33668975
MGI SNP Detail		 Chr1:149979971 Ptgs2 within coordinates of
Tssr9235 1515 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs8238843
MGI SNP Detail		 Chr1:149979992 Ptgs2 within coordinates of
Tssr9235 1536 bp downstream
 SNP C/T C C C T C C C T C T T T T T
rs8238844
MGI SNP Detail		 Chr1:149979993 Ptgs2 within coordinates of
Tssr9235 1537 bp downstream
 SNP A/G A A A G A A A A G G A G G A G G G G A A G G A
rs33668974
MGI SNP Detail		 Chr1:149980047 Ptgs2 within coordinates of
Tssr9235 1591 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs33667753
MGI SNP Detail		 Chr1:149980056 Ptgs2 within coordinates of
Tssr9235 1600 bp downstream
Tssr9257 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs580443828
MGI SNP Detail		 Chr1:149980197 Ptgs2 within coordinates of
Tssr9235 1741 bp downstream
Tssr9260 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs8238845
MGI SNP Detail		 Chr1:149980247 Ptgs2 within coordinates of
Tssr9235 1791 bp downstream
Tssr9263 within coordinates of
 SNP A/T T A A A
rs33667752
MGI SNP Detail		 Chr1:149980330 Ptgs2 within coordinates of
Tssr9235 1874 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs33667751
MGI SNP Detail		 Chr1:149980417 Ptgs2 within coordinates of
Tssr9235 1961 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs583344556
MGI SNP Detail		 Chr1:149980439 Ptgs2 within coordinates of
Tssr9235 1983 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 67 of 67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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