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Mouse SNP Summary
Symbol
Name
ID 		Tssr9784
transcription start site region 9784
MGI:5937551

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236449563
MGI SNP Detail		 Chr1:164264182 Nme7 within coordinates of
Tssr9784 1862 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G G A G G A A A A A G A A A A A A G A A A A A A A G A A A A
rs243826612
MGI SNP Detail		 Chr1:164264197 Nme7 within coordinates of
Tssr9784 1847 bp upstream
 SNP A/G A G
rs232302872
MGI SNP Detail		 Chr1:164264200 Nme7 within coordinates of
Tssr9784 1844 bp upstream
 SNP A/G G A
rs48405708
MGI SNP Detail		 Chr1:164264227 Nme7 within coordinates of
Tssr9784 1817 bp upstream
 SNP C/T T T T T T T C T T C T T C T
rs260558408
MGI SNP Detail		 Chr1:164264244 Nme7 within coordinates of
Tssr9784 1800 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217073279
MGI SNP Detail		 Chr1:164264245 Nme7 within coordinates of
Tssr9784 1799 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233488282
MGI SNP Detail		 Chr1:164264253 Nme7 within coordinates of
Tssr9784 1791 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C T T C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs47592931
MGI SNP Detail		 Chr1:164264260 Nme7 within coordinates of
Tssr9784 1784 bp upstream
 SNP A/C A A A A A A C A A C A A C A
rs219396445
MGI SNP Detail		 Chr1:164264271 Nme7 within coordinates of
Tssr9784 1773 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T C C T T T T T C T T T T T T C T T T T T T T T T T T T
rs221332750
MGI SNP Detail		 Chr1:164264445 Nme7 within coordinates of
Tssr9784 1599 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250044635
MGI SNP Detail		 Chr1:164264456 Nme7 within coordinates of
Tssr9784 1588 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259862011
MGI SNP Detail		 Chr1:164264462 Nme7 within coordinates of
Tssr9784 1582 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs229265633
MGI SNP Detail		 Chr1:164264516 Nme7 within coordinates of
Tssr9784 1528 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239338236
MGI SNP Detail		 Chr1:164264634 Nme7 within coordinates of
Tssr9784 1410 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30468812
MGI SNP Detail		 Chr1:164265041 Atp1b1 within coordinates of
Tssr9784 1003 bp upstream
 SNP A/G G G A
rs230477626
MGI SNP Detail		 Chr1:164265197 Atp1b1 within coordinates of
Tssr9784 847 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251766233
MGI SNP Detail		 Chr1:164265203 Atp1b1 within coordinates of
Tssr9784 841 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212538022
MGI SNP Detail		 Chr1:164265265 Atp1b1 within coordinates of
Tssr9784 779 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30763124
MGI SNP Detail		 Chr1:164265268 Atp1b1 within coordinates of
Tssr9784 776 bp upstream
 SNP A/T A A A T
rs13462308
MGI SNP Detail		 Chr1:164265271 Atp1b1 within coordinates of
Tssr9784 773 bp upstream
 SNP A/T A A A T A T
rs217812141
MGI SNP Detail		 Chr1:164265299 Atp1b1 within coordinates of
Tssr9784 745 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45859813
MGI SNP Detail		 Chr1:164265585 Atp1b1 within coordinates of
Tssr9784 459 bp upstream
 SNP C/T C C C C C C C T T C C T C C T C
rs253354994
MGI SNP Detail		 Chr1:164265937 Atp1b1 within coordinates of
Tssr14739 within coordinates of
Tssr9784 107 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs45754318
MGI SNP Detail		 Chr1:164265955 Atp1b1 within coordinates of
Tssr9784 89 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs49637314
MGI SNP Detail		 Chr1:164266049 Atp1b1 within coordinates of
Tssr14741 within coordinates of
Tssr9784 within coordinates of
 SNP A/G G G G G G G G G A G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255289569
MGI SNP Detail		 Chr1:164266177 Atp1b1 within coordinates of
Tssr9784 101 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G A A A G
rs50064486
MGI SNP Detail		 Chr1:164266209 Atp1b1 within coordinates of
Tssr9784 133 bp downstream
 SNP A/G G G G G G G A G G G G G
rs49278185
MGI SNP Detail		 Chr1:164266290 Atp1b1 within coordinates of
Tssr9784 214 bp downstream
 SNP A/G A A A A A A A A G A A G A A G A
rs49870348
MGI SNP Detail		 Chr1:164266330 Atp1b1 within coordinates of
Tssr9784 254 bp downstream
 SNP A/G G G A
rs47865875
MGI SNP Detail		 Chr1:164266353 Atp1b1 within coordinates of
Tssr9784 277 bp downstream
 SNP A/G A A A A A A G G G A A G G A G G G
rs47493264
MGI SNP Detail		 Chr1:164266406 Atp1b1 within coordinates of
Tssr9784 330 bp downstream
 SNP A/G G G G G G G G G A G G A G G A G
rs230063901
MGI SNP Detail		 Chr1:164266464 Atp1b1 within coordinates of
Tssr9784 388 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46829059
MGI SNP Detail		 Chr1:164266485 Atp1b1 within coordinates of
Tssr9784 409 bp downstream
 SNP C/T T T T T T T T C C T T C T T C T
rs50925777
MGI SNP Detail		 Chr1:164266508 Atp1b1 within coordinates of
Tssr9784 432 bp downstream
 SNP A/G G G G G G G G G A G G A G G A G
rs51817293
MGI SNP Detail		 Chr1:164266578 Atp1b1 within coordinates of
Tssr9784 502 bp downstream
 SNP A/G A A A A A A A G G A A G G A G G G
rs248302298
MGI SNP Detail		 Chr1:164266590 Atp1b1 within coordinates of
Tssr9784 514 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs48497748
MGI SNP Detail		 Chr1:164266604 Atp1b1 within coordinates of
Tssr9784 528 bp downstream
 SNP C/T T T T T T T T T C T T C T T C T
rs227766848
MGI SNP Detail		 Chr1:164266605 Atp1b1 within coordinates of
Tssr9784 529 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247626456
MGI SNP Detail		 Chr1:164266606 Atp1b1 within coordinates of
Tssr9784 530 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48800105
MGI SNP Detail		 Chr1:164266728 Atp1b1 within coordinates of
Tssr9784 652 bp downstream
 SNP A/C A A A A A A A C C A A C A A C A
rs51627915
MGI SNP Detail		 Chr1:164266760 Atp1b1 within coordinates of
Tssr9784 684 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs45811011
MGI SNP Detail		 Chr1:164266786 Atp1b1 within coordinates of
Tssr9784 710 bp downstream
 SNP C/T T T T T T T T C C T T C T T C T
rs212634053
MGI SNP Detail		 Chr1:164266797 Atp1b1 within coordinates of
Tssr9784 721 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs46267244
MGI SNP Detail		 Chr1:164266826 Atp1b1 within coordinates of
Tssr9784 750 bp downstream
 SNP C/T C C T
rs253111370
MGI SNP Detail		 Chr1:164266839 Atp1b1 within coordinates of
Tssr9784 763 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220722271
MGI SNP Detail		 Chr1:164266853 Atp1b1 within coordinates of
Tssr9784 777 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49546605
MGI SNP Detail		 Chr1:164266857 Atp1b1 within coordinates of
Tssr9784 781 bp downstream
 SNP A/T A A T A T
rs249669379
MGI SNP Detail		 Chr1:164266858 Atp1b1 within coordinates of
Tssr9784 782 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222167644
MGI SNP Detail		 Chr1:164266860 Atp1b1 within coordinates of
Tssr9784 784 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244253504
MGI SNP Detail		 Chr1:164267016 Atp1b1 within coordinates of
Tssr9784 940 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48985910
MGI SNP Detail		 Chr1:164267032 Atp1b1 within coordinates of
Tssr9784 956 bp downstream
 SNP C/G G G C
rs46122411
MGI SNP Detail		 Chr1:164267035 Atp1b1 within coordinates of
Tssr9784 959 bp downstream
 SNP A/G A A G
rs46324489
MGI SNP Detail		 Chr1:164267069 Atp1b1 within coordinates of
Tssr9784 993 bp downstream
 SNP C/G G G G G G G G G C G G C G G C G
rs47989124
MGI SNP Detail		 Chr1:164267135 Atp1b1 within coordinates of
Tssr9784 1059 bp downstream
 SNP A/G A A G
rs49617219
MGI SNP Detail		 Chr1:164267152 Atp1b1 within coordinates of
Tssr9784 1076 bp downstream
 SNP A/G G G A
rs247588245
MGI SNP Detail		 Chr1:164267179 Atp1b1 within coordinates of
Tssr9784 1103 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50496469
MGI SNP Detail		 Chr1:164267196 Atp1b1 within coordinates of
Tssr9784 1120 bp downstream
 SNP A/C A A C
rs230760306
MGI SNP Detail		 Chr1:164267207 Atp1b1 within coordinates of
Tssr9784 1131 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs51885266
MGI SNP Detail		 Chr1:164267259 Atp1b1 within coordinates of
Tssr9784 1183 bp downstream
 SNP A/T T T T T T T A A T T A T T A T
rs47685263
MGI SNP Detail		 Chr1:164267332 Atp1b1 within coordinates of
Tssr9784 1256 bp downstream
 SNP A/G A A A A A A G G G A A G G A G G G
rs234117420
MGI SNP Detail		 Chr1:164267367 Atp1b1 within coordinates of
Tssr9784 1291 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C T T C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247230601
MGI SNP Detail		 Chr1:164267426 Atp1b1 within coordinates of
Tssr9784 1350 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs46181454
MGI SNP Detail		 Chr1:164267528 Atp1b1 within coordinates of
Tssr9784 1452 bp downstream
 SNP C/T T T T T T T C C C T C C T C
rs49649832
MGI SNP Detail		 Chr1:164267534 Atp1b1 within coordinates of
Tssr9784 1458 bp downstream
 SNP A/G G G G G A G A G
rs261993217
MGI SNP Detail		 Chr1:164267576 Atp1b1 within coordinates of
Tssr9784 1500 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223416626
MGI SNP Detail		 Chr1:164267641 Atp1b1 within coordinates of
Tssr9784 1565 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50900556
MGI SNP Detail		 Chr1:164267656 Atp1b1 within coordinates of
Tssr9784 1580 bp downstream
 SNP A/G G G G G G G G A A G G A G G G G
rs255606724
MGI SNP Detail		 Chr1:164267707 Atp1b1 within coordinates of
Tssr9784 1631 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A A A C A A C C C C C A C C C C C C A C C C C C C C C C C C
rs49085454
MGI SNP Detail		 Chr1:164267727 Atp1b1 within coordinates of
Tssr9784 1651 bp downstream
 SNP A/G G G A
rs49653087
MGI SNP Detail		 Chr1:164267754 Atp1b1 within coordinates of
Tssr9784 1678 bp downstream
 SNP C/T C C T
rs261424462
MGI SNP Detail		 Chr1:164267840 Atp1b1 within coordinates of
Tssr9784 1764 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221218745
MGI SNP Detail		 Chr1:164267925 Atp1b1 within coordinates of
Tssr9784 1849 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31092090
MGI SNP Detail		 Chr1:164267959 Atp1b1 within coordinates of
Tssr9784 1883 bp downstream
 SNP G/T T T T T G T G
rs32279428
MGI SNP Detail		 Chr1:164267983 Atp1b1 within coordinates of
Tssr9784 1907 bp downstream
 SNP A/G G G G G G G G G G A G G A G G G G
rs48349689
MGI SNP Detail		 Chr1:164268003 Atp1b1 within coordinates of
Tssr9784 1927 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32033279
MGI SNP Detail		 Chr1:164268018 Atp1b1 within coordinates of
Tssr9784 1942 bp downstream
 SNP C/G C C C C G
rs261761085
MGI SNP Detail		 Chr1:164268025 Atp1b1 within coordinates of
Tssr9784 1949 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31444757
MGI SNP Detail		 Chr1:164268029 Atp1b1 within coordinates of
Tssr9784 1953 bp downstream
 SNP A/G A A A A A A A A G G G A A G G A G G G
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Showing SNP(s) 1 - 78 of 78
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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