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Mouse SNP Summary
Symbol
Name
ID 		Tssr10000
transcription start site region 10000
MGI:5937767

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Showing SNP(s) 1 - 85 of 85

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260425467
MGI SNP Detail		 Chr1:171072992 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1929 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216918705
MGI SNP Detail		 Chr1:171073036 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1885 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230910832
MGI SNP Detail		 Chr1:171073109 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1812 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248313732
MGI SNP Detail		 Chr1:171073142 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1779 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220120593
MGI SNP Detail		 Chr1:171073226 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1695 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584476240
MGI SNP Detail		 Chr1:171073250 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1671 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49886739
MGI SNP Detail		 Chr1:171073334 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1587 bp upstream
 SNP C/T T C T T C
rs46512100
MGI SNP Detail		 Chr1:171073351 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1570 bp upstream
 SNP C C C C
rs48052679
MGI SNP Detail		 Chr1:171073359 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1562 bp upstream
 SNP A/G A A G A A A
rs51020671
MGI SNP Detail		 Chr1:171073372 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1549 bp upstream
 SNP G/T G T T G G T
rs578509003
MGI SNP Detail		 Chr1:171073397 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1524 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50215924
MGI SNP Detail		 Chr1:171073441 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1480 bp upstream
 SNP C/T T T C T T T
rs245060843
MGI SNP Detail		 Chr1:171073453 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1468 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261209250
MGI SNP Detail		 Chr1:171073460 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1461 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222525659
MGI SNP Detail		 Chr1:171073471 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1450 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs237870965
MGI SNP Detail		 Chr1:171073474 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1447 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255798372
MGI SNP Detail		 Chr1:171073491 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1430 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230648796
MGI SNP Detail		 Chr1:171073502 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1419 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245543634
MGI SNP Detail		 Chr1:171073527 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1394 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263820430
MGI SNP Detail		 Chr1:171073544 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1377 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31608556
MGI SNP Detail		 Chr1:171073553 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1368 bp upstream
 SNP C/T C T C C C
rs247783589
MGI SNP Detail		 Chr1:171073559 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1362 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216947397
MGI SNP Detail		 Chr1:171073590 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1331 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31541216
MGI SNP Detail		 Chr1:171073621 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1300 bp upstream
 SNP G/T G G G G G G G G G G G T G G G
rs8245237
MGI SNP Detail		 Chr1:171073718 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1203 bp upstream
 SNP C/G G G G C G G C G C C G G G G C C G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs8245238
MGI SNP Detail		 Chr1:171073763 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1158 bp upstream
 SNP A/G G G G A G G A G A A G G G G A G G G G G G G G
rs8245239
MGI SNP Detail		 Chr1:171073787 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1134 bp upstream
 SNP C/T C C C C T C C T C T T C C C C T T C C C C C C C
rs8245240
MGI SNP Detail		 Chr1:171073808 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1113 bp upstream
 SNP A/G G G A G G G G G G G G G A A G G G G A A A A A G A
rs215816896
MGI SNP Detail		 Chr1:171073813 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1108 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8245241
MGI SNP Detail		 Chr1:171073814 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1107 bp upstream
 SNP A/G G G G G G G A G G G G G G
rs8245242
MGI SNP Detail		 Chr1:171073815 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1106 bp upstream
 SNP C/T T T T T T T C T T T T T T
rs579305895
MGI SNP Detail		 Chr1:171073891 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1030 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G A G G G G A A G G G A G G G
rs222563870
MGI SNP Detail		 Chr1:171073908 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1013 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32000660
MGI SNP Detail		 Chr1:171073943 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 978 bp upstream
 SNP C/T C T C C C
rs31230648
MGI SNP Detail		 Chr1:171074035 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 886 bp upstream
 SNP A/G G G A G A G A A G G G G A G G G G G
rs582662607
MGI SNP Detail		 Chr1:171074042 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 879 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222813643
MGI SNP Detail		 Chr1:171074046 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 875 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242857336
MGI SNP Detail		 Chr1:171074089 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 832 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31541215
MGI SNP Detail		 Chr1:171074190 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 731 bp upstream
 SNP C/T C C C T C T C T T C C C C T C C C C C
rs231342052
MGI SNP Detail		 Chr1:171074199 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 722 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241936118
MGI SNP Detail		 Chr1:171074239 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 682 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585807884
MGI SNP Detail		 Chr1:171074367 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 554 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8245255
MGI SNP Detail		 Chr1:171074472 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 449 bp upstream
 SNP C/T T T T T T T T T T C T T C
rs224722881
MGI SNP Detail		 Chr1:171074540 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 381 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs8245256
MGI SNP Detail		 Chr1:171074577 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 344 bp upstream
 SNP C/T C C C C T C C T C T C C C C C C C C C C C C C C
rs214949421
MGI SNP Detail		 Chr1:171074625 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 296 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A G G G
rs31541214
MGI SNP Detail		 Chr1:171074636 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 285 bp upstream
 SNP C/G G G G G G G G G G C G C G G C G G
rs253318813
MGI SNP Detail		 Chr1:171074721 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 200 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108790513
MGI SNP Detail		 Chr1:171074890 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 31 bp upstream
 SNP A/G A G G
rs255262764
MGI SNP Detail		 Chr1:171074902 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 19 bp upstream
 SNP A/T T T T A T T T T T A T T T T T T T T T T T A T T T A T T T T T T T T A A A A T A A T T T A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216630694
MGI SNP Detail		 Chr1:171074976 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 30 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31540333
MGI SNP Detail		 Chr1:171074986 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 40 bp downstream
 SNP A/C A A C C A C A C C C C C A C C C C C C
rs31540332
MGI SNP Detail		 Chr1:171075023 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 77 bp downstream
 SNP G/T G G G G G G G G G G G G G G T
rs579002414
MGI SNP Detail		 Chr1:171075043 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 97 bp downstream
 SNP A/C A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A C C
rs3709584
MGI SNP Detail		 Chr1:171075063 Cpgi1016 within coordinates of
Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 117 bp downstream
 SNP C/G C G G C G C G G G G G C G G G G G G
rs223236655
MGI SNP Detail		 Chr1:171075302 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 356 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237824492
MGI SNP Detail		 Chr1:171075309 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 363 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259168152
MGI SNP Detail		 Chr1:171075318 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 372 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223804375
MGI SNP Detail		 Chr1:171075327 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 381 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31540331
MGI SNP Detail		 Chr1:171075820 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 874 bp downstream
 SNP A/G A A A G A G A G G A A A A G A A A A A
rs31540330
MGI SNP Detail		 Chr1:171075892 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 946 bp downstream
 SNP C/T T T T T T T T T T T T T T T C
rs218957592
MGI SNP Detail		 Chr1:171075939 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 993 bp downstream
 SNP C/G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C C
rs52048990
MGI SNP Detail		 Chr1:171075941 Gm71631 within coordinates of
Ndufs2 within coordinates of
Rr372446 within coordinates of
Tssr10000 995 bp downstream
 SNP A/G A A G A A A
rs3656340
MGI SNP Detail		 Chr1:171076017 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1071 bp downstream
 SNP A/G G G A A G A G A A A A A G A A A A A G
rs230308575
MGI SNP Detail		 Chr1:171076037 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1091 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258503811
MGI SNP Detail		 Chr1:171076101 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1155 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs585736101
MGI SNP Detail		 Chr1:171076107 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1161 bp downstream
 SNP G/T G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T
rs3656951
MGI SNP Detail		 Chr1:171076108 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1162 bp downstream
 SNP C/T C C C T C C C
rs229306763
MGI SNP Detail		 Chr1:171076109 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1163 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248042324
MGI SNP Detail		 Chr1:171076195 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1249 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T C C C
rs212945013
MGI SNP Detail		 Chr1:171076270 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1324 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C
rs230605326
MGI SNP Detail		 Chr1:171076304 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1358 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249114971
MGI SNP Detail		 Chr1:171076359 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1413 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215020948
MGI SNP Detail		 Chr1:171076398 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1452 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236047118
MGI SNP Detail		 Chr1:171076401 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1455 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263227992
MGI SNP Detail		 Chr1:171076421 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1475 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220513573
MGI SNP Detail		 Chr1:171076508 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1562 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234852480
MGI SNP Detail		 Chr1:171076546 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1600 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T
rs252413713
MGI SNP Detail		 Chr1:171076581 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1635 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218369577
MGI SNP Detail		 Chr1:171076666 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1720 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579868167
MGI SNP Detail		 Chr1:171076745 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1799 bp downstream
 SNP C/G C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G G G
rs52513788
MGI SNP Detail		 Chr1:171076778 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1832 bp downstream
 SNP A/T T A T
rs52349491
MGI SNP Detail		 Chr1:171076822 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1876 bp downstream
 SNP A/G G A G A G A
rs582010743
MGI SNP Detail		 Chr1:171076824 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1878 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52212765
MGI SNP Detail		 Chr1:171076845 Gm71631 within coordinates of
Ndufs2 within coordinates of
Tssr10000 1899 bp downstream
 SNP A/C C A C A
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Showing SNP(s) 1 - 85 of 85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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