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Mouse SNP Summary
Symbol
Name
ID
Tssr10130
transcription start site region 10130
MGI:5937897

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Showing SNP(s) 1 - 35 of 35

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244669508
MGI SNP Detail
Chr1:171681519 Cd84 within coordinates of
Tssr10130 1956 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32671356
MGI SNP Detail
Chr1:171681591 Cd84 within coordinates of
Tssr10130 1884 bp upstream
SNP G/T T T G T T T
rs238717729
MGI SNP Detail
Chr1:171681601 Cd84 within coordinates of
Tssr10130 1874 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31739467
MGI SNP Detail
Chr1:171681606 Cd84 within coordinates of
Tssr10130 1869 bp upstream
SNP A/G A A G A A A
rs215675174
MGI SNP Detail
Chr1:171681690 Cd84 within coordinates of
Tssr10130 1785 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32514618
MGI SNP Detail
Chr1:171681698 Cd84 within coordinates of
Tssr10130 1777 bp upstream
SNP A/T T T A T T T
rs31351315
MGI SNP Detail
Chr1:171681707 Cd84 within coordinates of
Tssr10130 1768 bp upstream
SNP C/T C C T C C C
rs32532871
MGI SNP Detail
Chr1:171681818 Cd84 within coordinates of
Tssr10130 1657 bp upstream
SNP A/G A A G A A A
rs49071475
MGI SNP Detail
Chr1:171681986 Cd84 within coordinates of
Tssr10130 1489 bp upstream
SNP A/G G G G A
rs251741277
MGI SNP Detail
Chr1:171682020 Cd84 within coordinates of
Tssr10130 1455 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31854448
MGI SNP Detail
Chr1:171682059 Cd84 within coordinates of
Tssr10130 1416 bp upstream
SNP C/T T T C T
rs32621030
MGI SNP Detail
Chr1:171682066 Cd84 within coordinates of
Tssr10130 1409 bp upstream
SNP A/T T T A T
rs31714470
MGI SNP Detail
Chr1:171682174 Cd84 within coordinates of
Tssr10130 1301 bp upstream
SNP A/T T T A T T T
rs48453577
MGI SNP Detail
Chr1:171682237 Cd84 within coordinates of
Tssr10130 1238 bp upstream
SNP A/G A A G A A A
rs265610679
MGI SNP Detail
Chr1:171682257 Cd84 within coordinates of
Tssr10130 1218 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A
rs47374668
MGI SNP Detail
Chr1:171682411 Cd84 within coordinates of
Tssr10130 1064 bp upstream
SNP A/G G A G G G
rs250557435
MGI SNP Detail
Chr1:171682423 Cd84 within coordinates of
Tssr10130 1052 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs50909733
MGI SNP Detail
Chr1:171682564 Cd84 within coordinates of
Tssr10130 911 bp upstream
SNP G/T G T G G G
rs223685029
MGI SNP Detail
Chr1:171682607 Cd84 within coordinates of
Tssr10130 868 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52435845
MGI SNP Detail
Chr1:171682635 Cd84 within coordinates of
Tssr10130 840 bp upstream
SNP A/G G A G G G
rs31006001
MGI SNP Detail
Chr1:171682861 Cd84 within coordinates of
Tssr10130 614 bp upstream
SNP C/T C C C T C C C
rs32655088
MGI SNP Detail
Chr1:171683187 Cd84 within coordinates of
Tssr10130 288 bp upstream
SNP C/T T T C T T T
rs32438806
MGI SNP Detail
Chr1:171683289 Cd84 within coordinates of
Tssr10130 186 bp upstream
SNP A/G G G A G G G
rs31654330
MGI SNP Detail
Chr1:171683314 Cd84 within coordinates of
Tssr10130 161 bp upstream
SNP A/G G A G G G A
rs240287019
MGI SNP Detail
Chr1:171683434 Cd84 within coordinates of
Tssr10130 41 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247938752
MGI SNP Detail
Chr1:171683473 Cd84 within coordinates of
Tssr10130 2 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212757023
MGI SNP Detail
Chr1:171683565 Cd84 within coordinates of
Tssr10130 70 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A G A A A A A A A G A G A A A A A A A A A A A A A G
rs32542925
MGI SNP Detail
Chr1:171683597 Cd84 within coordinates of
Tssr10130 102 bp downstream
SNP A/G G G A G G G
rs32112285
MGI SNP Detail
Chr1:171683738 Cd84 within coordinates of
Tssr10130 243 bp downstream
Tssr10132 within coordinates of
SNP C/G G G C G G G
rs107971150
MGI SNP Detail
Chr1:171684284 Cd84 within coordinates of
Tssr10130 789 bp downstream
SNP A/C C A
rs31774239
MGI SNP Detail
Chr1:171684404 Cd84 within coordinates of
Tssr10130 909 bp downstream
Tssr10137 within coordinates of
SNP G/T T T T G T T G
rs240626440
MGI SNP Detail
Chr1:171684410 Cd84 within coordinates of
Tssr10130 915 bp downstream
Tssr10137 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32216943
MGI SNP Detail
Chr1:171684439 Cd84 within coordinates of
Tssr10130 944 bp downstream
Tssr10137 within coordinates of
SNP C/T C C C T C C C
rs107705695
MGI SNP Detail
Chr1:171684726 Cd84 within coordinates of
Tssr10130 1231 bp downstream
SNP A/T T A
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Showing SNP(s) 1 - 35 of 35

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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