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Mouse SNP Summary
Symbol
Name
ID 		Tssr10219
transcription start site region 10219
MGI:5937986

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264677567
MGI SNP Detail		 Chr1:172330872 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1958 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32689919
MGI SNP Detail		 Chr1:172330881 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1949 bp upstream
 SNP C/T C C C T
rs32259193
MGI SNP Detail		 Chr1:172330882 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1948 bp upstream
 SNP A/G A G G G A A
rs32164019
MGI SNP Detail		 Chr1:172330978 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1852 bp upstream
 SNP A/G G A G A
rs227527598
MGI SNP Detail		 Chr1:172331198 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1632 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249094960
MGI SNP Detail		 Chr1:172331234 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1596 bp upstream
 SNP C/T C C C C C C C C C T C C C C C C C C C T C C C C C T C T C C C C C T C C C C C C C C C C C C C C C C T C C
rs216915527
MGI SNP Detail		 Chr1:172331334 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1496 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229713109
MGI SNP Detail		 Chr1:172331409 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1421 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249429176
MGI SNP Detail		 Chr1:172331515 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1315 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31359978
MGI SNP Detail		 Chr1:172331560 Rr29013 within coordinates of
Tagln2 within coordinates of
Tssr10219 1270 bp upstream
 SNP A/G A G G G
rs108810596
MGI SNP Detail		 Chr1:172331617 Tagln2 within coordinates of
Tssr10219 1213 bp upstream
 SNP C/G C G
rs108744187
MGI SNP Detail		 Chr1:172331676 Tagln2 within coordinates of
Tssr10219 1154 bp upstream
 SNP G/T T G
rs262873627
MGI SNP Detail		 Chr1:172331677 Tagln2 within coordinates of
Tssr10219 1153 bp upstream
 SNP A A A
rs230385948
MGI SNP Detail		 Chr1:172331931 Rr29014 within coordinates of
Tagln2 within coordinates of
Tssr10219 899 bp upstream
 SNP C C C
rs251646686
MGI SNP Detail		 Chr1:172332007 Rr29014 within coordinates of
Tagln2 within coordinates of
Tssr10219 823 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215013475
MGI SNP Detail		 Chr1:172332012 Rr29014 within coordinates of
Tagln2 within coordinates of
Tssr10219 818 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234937790
MGI SNP Detail		 Chr1:172332071 Rr29014 within coordinates of
Tagln2 within coordinates of
Tssr10219 759 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252564666
MGI SNP Detail		 Chr1:172332076 Rr29014 within coordinates of
Tagln2 within coordinates of
Tssr10219 754 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32684459
MGI SNP Detail		 Chr1:172332373 Rr29014 within coordinates of
Tagln2 within coordinates of
Tssr10219 457 bp upstream
 SNP C/T T C T T T
rs244004703
MGI SNP Detail		 Chr1:172332411 Tagln2 within coordinates of
Tssr10219 419 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31548610
MGI SNP Detail		 Chr1:172332418 Tagln2 within coordinates of
Tssr10219 412 bp upstream
 SNP C/T T C T T T
rs223224011
MGI SNP Detail		 Chr1:172332643 Tagln2 within coordinates of
Tssr10219 187 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs13461361
MGI SNP Detail		 Chr1:172332831 Tagln2 within coordinates of
Tssr10219 within coordinates of
 SNP C/T C C T C C C
rs259990506
MGI SNP Detail		 Chr1:172332858 Tagln2 within coordinates of
Tssr10219 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227566539
MGI SNP Detail		 Chr1:172332876 Tagln2 within coordinates of
Tssr10219 9 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242917521
MGI SNP Detail		 Chr1:172332959 Tagln2 within coordinates of
Tssr10219 92 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260865228
MGI SNP Detail		 Chr1:172332961 Tagln2 within coordinates of
Tssr10219 94 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229093229
MGI SNP Detail		 Chr1:172333007 Tagln2 within coordinates of
Tssr10219 140 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253380972
MGI SNP Detail		 Chr1:172333073 Tagln2 within coordinates of
Tssr10219 206 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs215236183
MGI SNP Detail		 Chr1:172333074 Tagln2 within coordinates of
Tssr10219 207 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230659896
MGI SNP Detail		 Chr1:172333391 Tagln2 within coordinates of
Tssr10219 524 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245717543
MGI SNP Detail		 Chr1:172333398 Tagln2 within coordinates of
Tssr10219 531 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214856423
MGI SNP Detail		 Chr1:172333529 Tagln2 within coordinates of
Tssr10219 662 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234978073
MGI SNP Detail		 Chr1:172333542 Tagln2 within coordinates of
Tssr10219 675 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32395763
MGI SNP Detail		 Chr1:172333581 Tagln2 within coordinates of
Tssr10219 714 bp downstream
 SNP G/T G T G T
rs30504313
MGI SNP Detail		 Chr1:172333605 Tagln2 within coordinates of
Tssr10219 738 bp downstream
 SNP G/T T T G T T T
rs387192724
MGI SNP Detail		 Chr1:172333612 Tagln2 within coordinates of
Tssr10219 745 bp downstream
 SNP A/G A A A A A A A A A G A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A G A A
rs234501162
MGI SNP Detail		 Chr1:172333667 Tagln2 within coordinates of
Tssr10219 800 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs13461362
MGI SNP Detail		 Chr1:172334375 Tagln2 within coordinates of
Tssr10219 1508 bp downstream
Tssr10230 within coordinates of
 SNP C/T C T T T C
rs241229551
MGI SNP Detail		 Chr1:172334392 Tagln2 within coordinates of
Tssr10219 1525 bp downstream
Tssr10230 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253706978
MGI SNP Detail		 Chr1:172334395 Tagln2 within coordinates of
Tssr10219 1528 bp downstream
Tssr10230 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585935550
MGI SNP Detail		 Chr1:172334476 Tagln2 within coordinates of
Tssr10219 1609 bp downstream
Tssr10232 within coordinates of
 SNP C/T T C C T T C C T C C C C C C C C C C C C C C C C T T C C T C C C T C C C C T C C
rs221063543
MGI SNP Detail		 Chr1:172334585 Tagln2 within coordinates of
Tssr10219 1718 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242943705
MGI SNP Detail		 Chr1:172334663 Tagln2 within coordinates of
Tssr10219 1796 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs264085611
MGI SNP Detail		 Chr1:172334700 Tagln2 within coordinates of
Tssr10219 1833 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221284967
MGI SNP Detail		 Chr1:172334817 Tagln2 within coordinates of
Tssr10219 1950 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Showing SNP(s) 1 - 46 of 46
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory