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Mouse SNP Summary
Symbol
Name
ID 		Tssr10387
transcription start site region 10387
MGI:5938154

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255781562
MGI SNP Detail		 Chr1:178162750 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1897 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226455891
MGI SNP Detail		 Chr1:178163020 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1627 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257294308
MGI SNP Detail		 Chr1:178163086 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1561 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216786813
MGI SNP Detail		 Chr1:178163147 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1500 bp upstream
 SNP A/T A A A T A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A A A A T A A A A A A A A
rs32116045
MGI SNP Detail		 Chr1:178163211 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1436 bp upstream
 SNP A/G G A A
rs254862447
MGI SNP Detail		 Chr1:178163222 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1425 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212275605
MGI SNP Detail		 Chr1:178163278 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1369 bp upstream
 SNP C/T T T T T C T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T C T T T T T T T T
rs229792705
MGI SNP Detail		 Chr1:178163363 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1284 bp upstream
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C T C C C C C C C C
rs250324152
MGI SNP Detail		 Chr1:178163375 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 1272 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213587557
MGI SNP Detail		 Chr1:178163755 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 892 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33889675
MGI SNP Detail		 Chr1:178163830 Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 817 bp upstream
 SNP C/T T C T
rs224656226
MGI SNP Detail		 Chr1:178163912 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 735 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580364601
MGI SNP Detail		 Chr1:178163935 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 712 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260696198
MGI SNP Detail		 Chr1:178163987 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 660 bp upstream
 SNP C/G G G C G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G G G G C G G G G C G G G G
rs584112204
MGI SNP Detail		 Chr1:178164052 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 595 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217787064
MGI SNP Detail		 Chr1:178164146 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 501 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255713394
MGI SNP Detail		 Chr1:178164296 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 351 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226404757
MGI SNP Detail		 Chr1:178164480 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 167 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245796421
MGI SNP Detail		 Chr1:178164483 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 164 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs108855735
MGI SNP Detail		 Chr1:178164485 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Tssr10387 162 bp upstream
 SNP A A
rs587242111
MGI SNP Detail		 Chr1:178164702 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs13470405
MGI SNP Detail		 Chr1:178164714 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 within coordinates of
 SNP T T
rs260317597
MGI SNP Detail		 Chr1:178164723 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212209220
MGI SNP Detail		 Chr1:178164777 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 34 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225154178
MGI SNP Detail		 Chr1:178164786 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 43 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581337025
MGI SNP Detail		 Chr1:178164800 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 57 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244115730
MGI SNP Detail		 Chr1:178164801 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 58 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs13470406
MGI SNP Detail		 Chr1:178164846 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 103 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G A G G G G G G G G
rs108892935
MGI SNP Detail		 Chr1:178164879 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 136 bp downstream
Tssr10388 within coordinates of
Tssr15487 within coordinates of
 SNP T T
rs13470404
MGI SNP Detail		 Chr1:178164963 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 220 bp downstream
 SNP C/T C T T
rs217175475
MGI SNP Detail		 Chr1:178165224 Cpgi1090 within coordinates of
Hnrnpu within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 481 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239136049
MGI SNP Detail		 Chr1:178165419 Cpgi1090 within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 676 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32600096
MGI SNP Detail		 Chr1:178165595 Cpgi1090 within coordinates of
Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 852 bp downstream
 SNP C/T T T C T
rs579204438
MGI SNP Detail		 Chr1:178165711 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 968 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217734152
MGI SNP Detail		 Chr1:178165841 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1098 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30819197
MGI SNP Detail		 Chr1:178165854 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1111 bp downstream
 SNP A/G G A G G
rs249520134
MGI SNP Detail		 Chr1:178165976 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1233 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G A G G G G G G G G G
rs220269223
MGI SNP Detail		 Chr1:178165992 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1249 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248306234
MGI SNP Detail		 Chr1:178166016 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1273 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263809936
MGI SNP Detail		 Chr1:178166056 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1313 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226670833
MGI SNP Detail		 Chr1:178166076 Rr29068 within coordinates of
Rr372516 within coordinates of
Tssr10387 1333 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248374073
MGI SNP Detail		 Chr1:178166414 Rr372516 within coordinates of
Tssr10387 1671 bp downstream
 SNP A/T T T T T A T T T T T T T T T T T T A A A T T A T T T T A T A T T T A T T T T T T T T T A T T T T A T T T A
rs256107597
MGI SNP Detail		 Chr1:178166415 Rr372516 within coordinates of
Tssr10387 1672 bp downstream
 SNP A/C A A A A C A A A A A A A A A A A A C C C A A C A A A A C A C A A A C A A A A A A A A A C A A A A C A A A C
rs225094413
MGI SNP Detail		 Chr1:178166416 Rr372516 within coordinates of
Tssr10387 1673 bp downstream
 SNP C/T T T T T C T T T T T T T T T T T T C C C T T C T T T T C T C T T T C T T T T T T T T T C T T T T C T T T C
rs245156860
MGI SNP Detail		 Chr1:178166481 Rr372516 within coordinates of
Tssr10387 1738 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586498077
MGI SNP Detail		 Chr1:178166560 Tssr10387 1817 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258538012
MGI SNP Detail		 Chr1:178166655 Tssr10387 1912 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230763660
MGI SNP Detail		 Chr1:178166656 Tssr10387 1913 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257126716
MGI SNP Detail		 Chr1:178166736 Tssr10387 1993 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216612368
MGI SNP Detail		 Chr1:178166737 Tssr10387 1994 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 50 of 50
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory