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Mouse SNP Summary
Symbol
Name
ID 		Tssr10393
transcription start site region 10393
MGI:5938160

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Showing SNP(s) 1 - 92 of 92

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217826695
MGI SNP Detail		 Chr1:178231596 Tssr10393 2000 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs233691438
MGI SNP Detail		 Chr1:178231640 Tssr10393 1956 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242562732
MGI SNP Detail		 Chr1:178231641 Tssr10393 1955 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213199317
MGI SNP Detail		 Chr1:178231643 Tssr10393 1953 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231730788
MGI SNP Detail		 Chr1:178231831 Tssr10393 1765 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244899778
MGI SNP Detail		 Chr1:178231837 Tssr10393 1759 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs215766554
MGI SNP Detail		 Chr1:178231862 Tssr10393 1734 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32762147
MGI SNP Detail		 Chr1:178231864 Tssr10393 1732 bp upstream
 SNP C/T T C T T
rs260359933
MGI SNP Detail		 Chr1:178231890 Tssr10393 1706 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585774605
MGI SNP Detail		 Chr1:178232000 Tssr10393 1596 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227352404
MGI SNP Detail		 Chr1:178232026 Tssr10393 1570 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230070677
MGI SNP Detail		 Chr1:178232027 Tssr10393 1569 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32684619
MGI SNP Detail		 Chr1:178232105 Tssr10393 1491 bp upstream
 SNP C/T T C T T T T C T T T T T C C
rs218777104
MGI SNP Detail		 Chr1:178232138 Tssr10393 1458 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32739624
MGI SNP Detail		 Chr1:178232174 Tssr10393 1422 bp upstream
 SNP A/G G A A
rs238786116
MGI SNP Detail		 Chr1:178232209 Tssr10393 1387 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265281743
MGI SNP Detail		 Chr1:178232238 Tssr10393 1358 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580022668
MGI SNP Detail		 Chr1:178232297 Tssr10393 1299 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583033884
MGI SNP Detail		 Chr1:178232376 Tssr10393 1220 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224223191
MGI SNP Detail		 Chr1:178232455 Tssr10393 1141 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37053061
MGI SNP Detail		 Chr1:178232483 Tssr10393 1113 bp upstream
 SNP C/T C C C C C C C C C C C C T C
rs263878236
MGI SNP Detail		 Chr1:178232538 Tssr10393 1058 bp upstream
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C T C C C C C C C C C
rs585189839
MGI SNP Detail		 Chr1:178232539 Tssr10393 1057 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229010651
MGI SNP Detail		 Chr1:178232562 Tssr10393 1034 bp upstream
 SNP A/C A A A C A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A A A A C A A A A A A A A A
rs242117566
MGI SNP Detail		 Chr1:178232565 Tssr10393 1031 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254836023
MGI SNP Detail		 Chr1:178232591 Tssr10393 1005 bp upstream
 SNP A/C/G A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225611450
MGI SNP Detail		 Chr1:178232687 Tssr10393 909 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T T T T T T T T T T T T
rs251816477
MGI SNP Detail		 Chr1:178232801 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 795 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38580714
MGI SNP Detail		 Chr1:178232805 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 791 bp upstream
 SNP A/G G G G G G A G G G G G G G G
rs580340164
MGI SNP Detail		 Chr1:178232837 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 759 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G T G G T G G G G G T
rs50463759
MGI SNP Detail		 Chr1:178232861 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 735 bp upstream
 SNP G/T G T
rs239091957
MGI SNP Detail		 Chr1:178232869 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 727 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259239226
MGI SNP Detail		 Chr1:178232965 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 631 bp upstream
 SNP A/C A A A A C A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A A A A C A A A A A A A A A
rs32071579
MGI SNP Detail		 Chr1:178233007 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 589 bp upstream
 SNP A/T T A T T T A T A T A T A A T A
rs230014870
MGI SNP Detail		 Chr1:178233011 Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 585 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs250617667
MGI SNP Detail		 Chr1:178233214 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 382 bp upstream
 SNP C/T T T T T C T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T C T T T C T T T T
rs218713348
MGI SNP Detail		 Chr1:178233232 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 364 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231550544
MGI SNP Detail		 Chr1:178233243 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 353 bp upstream
 SNP C/G G G G G C G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G G G G C G G G G G G G G
rs257785439
MGI SNP Detail		 Chr1:178233262 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 334 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs224137306
MGI SNP Detail		 Chr1:178233320 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 276 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583785309
MGI SNP Detail		 Chr1:178233335 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 261 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G C G G G G G G G G G C G G G G G G G G G
rs587587716
MGI SNP Detail		 Chr1:178233357 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 239 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246431873
MGI SNP Detail		 Chr1:178233358 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 238 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G T G G G G G G G G
rs31357279
MGI SNP Detail		 Chr1:178233377 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 219 bp upstream
 SNP C/G C G C C
rs222393615
MGI SNP Detail		 Chr1:178233454 Cpgi1092 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 142 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235650465
MGI SNP Detail		 Chr1:178233486 Cpgi1092 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 110 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254427743
MGI SNP Detail		 Chr1:178233512 Cpgi1092 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 84 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225096971
MGI SNP Detail		 Chr1:178233615 Cpgi1092 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 16 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13476262
MGI SNP Detail		 Chr1:178233631 Cpgi1092 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 32 bp downstream
Tssr10395 within coordinates of
 SNP C/T T T C C T T C T T T T T C C T C T C C C T T T C C T T C T C C T T T T C T T T T T T T T T T T C C
rs263330150
MGI SNP Detail		 Chr1:178233637 Cpgi1092 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 38 bp downstream
Tssr10396 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233522218
MGI SNP Detail		 Chr1:178233654 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 55 bp downstream
Tssr10396 within coordinates of
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G A G G G G G G G G G
rs254303531
MGI SNP Detail		 Chr1:178233681 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 82 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217445924
MGI SNP Detail		 Chr1:178233771 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 172 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224297986
MGI SNP Detail		 Chr1:178233806 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 207 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244391598
MGI SNP Detail		 Chr1:178233836 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 237 bp downstream
 SNP A/C C C C C A C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C A C C C C C C C C C
rs32545482
MGI SNP Detail		 Chr1:178233868 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 269 bp downstream
 SNP A/G A G A
rs237202391
MGI SNP Detail		 Chr1:178233897 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70920 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 298 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262373936
MGI SNP Detail		 Chr1:178233998 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 399 bp downstream
Tssr15493 within coordinates of
 SNP A/G A A A A G A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A A A A G A A A G A A A A
rs215559278
MGI SNP Detail		 Chr1:178234026 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 427 bp downstream
 SNP G/T T T T T G T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T T T T G T T T T G T T T T
rs240964328
MGI SNP Detail		 Chr1:178234050 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 451 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G A G G G G G G G G G
rs260240279
MGI SNP Detail		 Chr1:178234141 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70923 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 542 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222711578
MGI SNP Detail		 Chr1:178234158 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70923 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 559 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235594198
MGI SNP Detail		 Chr1:178234165 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70923 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 566 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248643640
MGI SNP Detail		 Chr1:178234169 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70923 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 570 bp downstream
 SNP G/T G G G G T G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G G G G T G G G G G G G G G
rs36725095
MGI SNP Detail		 Chr1:178234177 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70923 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 578 bp downstream
 SNP A/G A A A A A G A A A A A A A
rs243875451
MGI SNP Detail		 Chr1:178234200 Cpgi1092 within coordinates of
Efcab2 within coordinates of
Gm70923 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 601 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265569391
MGI SNP Detail		 Chr1:178234518 Efcab2 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 919 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232639277
MGI SNP Detail		 Chr1:178234547 Efcab2 within coordinates of
Rr29069 within coordinates of
Rr372517 within coordinates of
Tssr10393 948 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250576945
MGI SNP Detail		 Chr1:178234641 Efcab2 within coordinates of
Rr29069 within coordinates of
Tssr10393 1042 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580171330
MGI SNP Detail		 Chr1:178234646 Efcab2 within coordinates of
Rr29069 within coordinates of
Tssr10393 1047 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583851714
MGI SNP Detail		 Chr1:178234655 Efcab2 within coordinates of
Rr29069 within coordinates of
Tssr10393 1056 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261553974
MGI SNP Detail		 Chr1:178234908 Efcab2 within coordinates of
Tssr10393 1309 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224611719
MGI SNP Detail		 Chr1:178234936 Efcab2 within coordinates of
Tssr10393 1337 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244329851
MGI SNP Detail		 Chr1:178234958 Efcab2 within coordinates of
Tssr10393 1359 bp downstream
 SNP A/G A A A A G A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A A A A G A A A A G A A A A
rs213755176
MGI SNP Detail		 Chr1:178235008 Efcab2 within coordinates of
Tssr10393 1409 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587023098
MGI SNP Detail		 Chr1:178235026 Efcab2 within coordinates of
Tssr10393 1427 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231336800
MGI SNP Detail		 Chr1:178235115 Efcab2 within coordinates of
Tssr10393 1516 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs580995526
MGI SNP Detail		 Chr1:178235127 Efcab2 within coordinates of
Tssr10393 1528 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252471505
MGI SNP Detail		 Chr1:178235237 Efcab2 within coordinates of
Tssr10393 1638 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215955953
MGI SNP Detail		 Chr1:178235238 Efcab2 within coordinates of
Tssr10393 1639 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238551084
MGI SNP Detail		 Chr1:178235282 Efcab2 within coordinates of
Tssr10393 1683 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252580263
MGI SNP Detail		 Chr1:178235294 Efcab2 within coordinates of
Tssr10393 1695 bp downstream
 SNP C/G C C C C G C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C C C C G C C C C G C C C C
rs217289370
MGI SNP Detail		 Chr1:178235295 Efcab2 within coordinates of
Tssr10393 1696 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230004057
MGI SNP Detail		 Chr1:178235303 Efcab2 within coordinates of
Tssr10393 1704 bp downstream
 SNP C/T T T T T C T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T C T T T T T T T T T
rs248596646
MGI SNP Detail		 Chr1:178235328 Efcab2 within coordinates of
Tssr10393 1729 bp downstream
 SNP C/T T T T T C T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T C T T T T T T T T T
rs219114264
MGI SNP Detail		 Chr1:178235343 Efcab2 within coordinates of
Tssr10393 1744 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246552882
MGI SNP Detail		 Chr1:178235357 Efcab2 within coordinates of
Tssr10393 1758 bp downstream
 SNP C/G C C C C G C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C C C C G C C C C C C C C C
rs46705268
MGI SNP Detail		 Chr1:178235370 Efcab2 within coordinates of
Tssr10393 1771 bp downstream
 SNP C C C C
rs224967774
MGI SNP Detail		 Chr1:178235437 Efcab2 within coordinates of
Tssr10393 1838 bp downstream
 SNP C/T C C C C T C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C T C C C C T C C C C
rs30477009
MGI SNP Detail		 Chr1:178235478 Efcab2 within coordinates of
Tssr10393 1879 bp downstream
 SNP G/T T G T
rs261506155
MGI SNP Detail		 Chr1:178235525 Efcab2 within coordinates of
Tssr10393 1926 bp downstream
 SNP G/T T T T T G T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T T T T G T T T T T T T T T
rs224558925
MGI SNP Detail		 Chr1:178235572 Efcab2 within coordinates of
Tssr10393 1973 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 92 of 92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory