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Mouse SNP Summary
Symbol
Name
ID 		Tssr10995
transcription start site region 10995
MGI:5938762

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Showing SNP(s) 1 - 49 of 49

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217185948
MGI SNP Detail		 Chr1:13442570 Cpgi41 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1874 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs235376886
MGI SNP Detail		 Chr1:13442577 Cpgi41 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1867 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250209040
MGI SNP Detail		 Chr1:13442586 Cpgi41 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1858 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A G G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs219634700
MGI SNP Detail		 Chr1:13442948 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1496 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32423024
MGI SNP Detail		 Chr1:13442983 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1461 bp downstream
 SNP A/C C A C C
rs261982316
MGI SNP Detail		 Chr1:13443024 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1420 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A
rs224985361
MGI SNP Detail		 Chr1:13443082 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1362 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G C C G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239079787
MGI SNP Detail		 Chr1:13443166 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 1278 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G
rs259785252
MGI SNP Detail		 Chr1:13443642 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 802 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G C G C C
rs229378088
MGI SNP Detail		 Chr1:13443668 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 776 bp downstream
 SNP C/T C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240964593
MGI SNP Detail		 Chr1:13443696 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 748 bp downstream
 SNP A/G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254778720
MGI SNP Detail		 Chr1:13443707 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 737 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs228242986
MGI SNP Detail		 Chr1:13443740 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 704 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs251605712
MGI SNP Detail		 Chr1:13443846 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 598 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A G A A G G A A G A A A A A A A A A A A A A A A A A A A G A G G G
rs214622551
MGI SNP Detail		 Chr1:13443969 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 475 bp downstream
 SNP G/T G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232755476
MGI SNP Detail		 Chr1:13444108 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10991 within coordinates of
Tssr10995 336 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G A G A G G G G G G G G G G G G G A G G G G G G G G G G A A G
rs246769215
MGI SNP Detail		 Chr1:13444212 Cpgi41 within coordinates of
Gm29570 within coordinates of
Ncoa2 within coordinates of
Tssr10995 232 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31860566
MGI SNP Detail		 Chr1:13444485 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 within coordinates of
 SNP C/G G G G C C C G
rs32149607
MGI SNP Detail		 Chr1:13444538 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 51 bp upstream
 SNP C/T C C T
rs31672452
MGI SNP Detail		 Chr1:13444576 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 89 bp upstream
 SNP A/G G G A
rs211851274
MGI SNP Detail		 Chr1:13444713 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 226 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238677527
MGI SNP Detail		 Chr1:13444758 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 271 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T T A A A A T A A A A A A A A A T A A A A A A A A A T T A
rs256796761
MGI SNP Detail		 Chr1:13444783 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 296 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30805040
MGI SNP Detail		 Chr1:13444790 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 303 bp upstream
 SNP A/C C C C C A
rs239246709
MGI SNP Detail		 Chr1:13444819 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 332 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253171157
MGI SNP Detail		 Chr1:13444820 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 333 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C C C C C C C C C C C C C
rs221847139
MGI SNP Detail		 Chr1:13444831 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 344 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C
rs236592067
MGI SNP Detail		 Chr1:13444853 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 366 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T
rs264898686
MGI SNP Detail		 Chr1:13444888 Cpgi41 within coordinates of
Gm29570 within coordinates of
Gm70663 within coordinates of
Tssr10995 401 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G
rs32248658
MGI SNP Detail		 Chr1:13445026 Cpgi41 within coordinates of
Gm29570 within coordinates of
Tssr10995 539 bp upstream
 SNP C/T C C C C T
rs246937919
MGI SNP Detail		 Chr1:13445045 Cpgi41 within coordinates of
Gm29570 within coordinates of
Tssr10995 558 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs262432979
MGI SNP Detail		 Chr1:13445149 Gm29570 within coordinates of
Tssr10995 662 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A
rs228139925
MGI SNP Detail		 Chr1:13445182 Gm29570 within coordinates of
Tssr10995 695 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs246817769
MGI SNP Detail		 Chr1:13445407 Gm29570 within coordinates of
Tssr10995 920 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217796384
MGI SNP Detail		 Chr1:13445460 Gm29570 within coordinates of
Tssr10995 973 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C C C T T C T T T T T T T T T T C T T T T T T T T C T C C T
rs228723703
MGI SNP Detail		 Chr1:13445523 Gm29570 within coordinates of
Tssr10995 1036 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579020536
MGI SNP Detail		 Chr1:13445542 Gm29570 within coordinates of
Tssr10995 1055 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs244564322
MGI SNP Detail		 Chr1:13445702 Gm29570 within coordinates of
Tssr10995 1215 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs211880982
MGI SNP Detail		 Chr1:13445796 Gm29570 within coordinates of
Tssr10995 1309 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236815341
MGI SNP Detail		 Chr1:13445850 Gm29570 within coordinates of
Tssr10995 1363 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs254827647
MGI SNP Detail		 Chr1:13445978 Gm29570 within coordinates of
Tssr10995 1491 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs216242439
MGI SNP Detail		 Chr1:13446021 Gm29570 within coordinates of
Tssr10995 1534 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
rs232567584
MGI SNP Detail		 Chr1:13446022 Gm29570 within coordinates of
Tssr10995 1535 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A A A A A A A A A C A A A A
rs582557383
MGI SNP Detail		 Chr1:13446106 Gm29570 within coordinates of
Tssr10995 1619 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253135848
MGI SNP Detail		 Chr1:13446150 Gm29570 within coordinates of
Tssr10995 1663 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G G G G G G G G G T G G G G
rs221945799
MGI SNP Detail		 Chr1:13446196 Gm29570 within coordinates of
Tssr10995 1709 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs584777716
MGI SNP Detail		 Chr1:13446255 Gm29570 within coordinates of
Tssr10995 1768 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230589157
MGI SNP Detail		 Chr1:13446292 Gm29570 within coordinates of
Tssr10995 1805 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
rs255412823
MGI SNP Detail		 Chr1:13446470 Gm29570 within coordinates of
Gm51852 within coordinates of
Tssr10995 1983 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 49 of 49
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory