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Mouse SNP Summary
Symbol
Name
ID 		Tssr11040
transcription start site region 11040
MGI:5938807

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580570906
MGI SNP Detail		 Chr1:16588254 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1993 bp downstream
 SNP C/T C C C C T C C C C T C C C C C C C C C T C C T C C C C C C C C C C T C C C T C C T C C C C C C T C C T T
rs584300168
MGI SNP Detail		 Chr1:16588273 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1974 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213204960
MGI SNP Detail		 Chr1:16588303 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1944 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232059851
MGI SNP Detail		 Chr1:16588331 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1916 bp downstream
 SNP C/T T T T T C T T T T C T T T T T T T T T C T T C T T T T T T T T T T C T T T C T T C T T T T T T T C T T C C
rs252415267
MGI SNP Detail		 Chr1:16588348 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1899 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215506837
MGI SNP Detail		 Chr1:16588445 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1802 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G C G
rs239594093
MGI SNP Detail		 Chr1:16588490 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1757 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T G T T G G
rs259120928
MGI SNP Detail		 Chr1:16588507 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1740 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs586483423
MGI SNP Detail		 Chr1:16588536 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1711 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T G T T G
rs581105826
MGI SNP Detail		 Chr1:16588553 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1694 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A G
rs225757862
MGI SNP Detail		 Chr1:16588577 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1670 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G A
rs584896507
MGI SNP Detail		 Chr1:16588635 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1612 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G C
rs248160232
MGI SNP Detail		 Chr1:16588670 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1577 bp downstream
 SNP A/G A A A A A A A G A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A
rs247958643
MGI SNP Detail		 Chr1:16588688 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1559 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A C
rs218562075
MGI SNP Detail		 Chr1:16588691 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1556 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T A T T T T T T A T T T T T T T A T T A
rs237372342
MGI SNP Detail		 Chr1:16588698 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1549 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T A A A A A A T A A A A A A A T A A T
rs579112196
MGI SNP Detail		 Chr1:16588699 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1548 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C
rs256311942
MGI SNP Detail		 Chr1:16588701 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1546 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C C T C C T
rs231657184
MGI SNP Detail		 Chr1:16588746 Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1501 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G C C
rs248889798
MGI SNP Detail		 Chr1:16588795 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1452 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264080058
MGI SNP Detail		 Chr1:16588797 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1450 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235051216
MGI SNP Detail		 Chr1:16588829 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1418 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs249268678
MGI SNP Detail		 Chr1:16588840 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1407 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs213007484
MGI SNP Detail		 Chr1:16588841 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1406 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585089368
MGI SNP Detail		 Chr1:16588867 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1380 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226067291
MGI SNP Detail		 Chr1:16588877 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1370 bp downstream
 SNP C/T T T T C T T T T C T T T T T T T T T C T T C T T T T C T T T T C T T T C T T C T T T T T T T C T T C C
rs245947884
MGI SNP Detail		 Chr1:16588879 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1368 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215425842
MGI SNP Detail		 Chr1:16588933 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1314 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C C
rs239094207
MGI SNP Detail		 Chr1:16588990 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1257 bp downstream
 SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T T
rs263973111
MGI SNP Detail		 Chr1:16588992 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 1255 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579345486
MGI SNP Detail		 Chr1:16589313 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 934 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs217596310
MGI SNP Detail		 Chr1:16589408 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 839 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A
rs242607151
MGI SNP Detail		 Chr1:16589416 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 831 bp downstream
 SNP A/G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247979903
MGI SNP Detail		 Chr1:16589466 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11038 within coordinates of
Tssr11040 781 bp downstream
 SNP C/T T T C T T T T T T T C T C T T T C T T T T T T T C T T T T T T T T
rs218442502
MGI SNP Detail		 Chr1:16589549 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11039 within coordinates of
Tssr11040 698 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C
rs582404460
MGI SNP Detail		 Chr1:16589639 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 608 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211804662
MGI SNP Detail		 Chr1:16589795 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 452 bp downstream
 SNP C/G C C C G C C C C G G G G G C C C C C C C C G G C C C C C C C G C C G C C
rs585875396
MGI SNP Detail		 Chr1:16589803 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 444 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580061208
MGI SNP Detail		 Chr1:16589809 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 438 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587503057
MGI SNP Detail		 Chr1:16589817 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 430 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237260698
MGI SNP Detail		 Chr1:16589956 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 291 bp downstream
 SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C
rs250401492
MGI SNP Detail		 Chr1:16590053 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 194 bp downstream
 SNP G/T T T T T G T T T T G T T T T T T T T G T T G T T T T G T G T T T G T T T G T T G T T T T T T T G T T G
rs224034405
MGI SNP Detail		 Chr1:16590073 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 174 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs246448810
MGI SNP Detail		 Chr1:16590130 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 117 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265905474
MGI SNP Detail		 Chr1:16590131 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 116 bp downstream
 SNP A/G A A A A G A A A A G A A A A A A A A A G A A G A A A A G A A A A G A A A G A A G A A A A A A A G A A A G
rs233950538
MGI SNP Detail		 Chr1:16590177 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 70 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs237235509
MGI SNP Detail		 Chr1:16590212 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 35 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs256963400
MGI SNP Detail		 Chr1:16590257 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs225981186
MGI SNP Detail		 Chr1:16590281 Cpgi55 within coordinates of
Rr28890 within coordinates of
Stau2 within coordinates of
Tssr11040 18 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245869227
MGI SNP Detail		 Chr1:16590352 Cpgi55 within coordinates of
Rr28890 within coordinates of
Tssr11040 89 bp upstream
Tssr11042 within coordinates of
 SNP A/G A A A G A A A A G A A A A A A A A A A A A G A A A A G A A A A G A A A G A A G A A A A A A A G A A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263331375
MGI SNP Detail		 Chr1:16590400 Cpgi55 within coordinates of
Rr28890 within coordinates of
Tssr11040 137 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs233436066
MGI SNP Detail		 Chr1:16590546 Rr28890 within coordinates of
Tssr11040 283 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254281656
MGI SNP Detail		 Chr1:16590625 Rr28890 within coordinates of
Tssr11040 362 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219518970
MGI SNP Detail		 Chr1:16590659 Rr28890 within coordinates of
Tssr11040 396 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586757789
MGI SNP Detail		 Chr1:16590726 Rr28890 within coordinates of
Tssr11040 463 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs240006005
MGI SNP Detail		 Chr1:16590749 Rr28890 within coordinates of
Tssr11040 486 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242035936
MGI SNP Detail		 Chr1:16590830 Tssr11040 567 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212547484
MGI SNP Detail		 Chr1:16590876 Tssr11040 613 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231256361
MGI SNP Detail		 Chr1:16590893 Tssr11040 630 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250262777
MGI SNP Detail		 Chr1:16590925 Tssr11040 662 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs224081162
MGI SNP Detail		 Chr1:16590935 Tssr11040 672 bp upstream
 SNP C/G G G G G C G G G G C G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G G G G G G G G G C C
rs240809874
MGI SNP Detail		 Chr1:16590951 Tssr11040 688 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs260256529
MGI SNP Detail		 Chr1:16590956 Tssr11040 693 bp upstream
 SNP A/T A A A A T A A A A T A A A A A A A A A T A A T A A A A T A T A A A T A A A T A A T A A A A A A A T A A T T
rs227086562
MGI SNP Detail		 Chr1:16590986 Tssr11040 723 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237145561
MGI SNP Detail		 Chr1:16591021 Tssr11040 758 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256879384
MGI SNP Detail		 Chr1:16591023 Tssr11040 760 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219621941
MGI SNP Detail		 Chr1:16591057 Tssr11040 794 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239938157
MGI SNP Detail		 Chr1:16591079 Tssr11040 816 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs265537009
MGI SNP Detail		 Chr1:16591094 Tssr11040 831 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232641599
MGI SNP Detail		 Chr1:16591138 Tssr11040 875 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs259462529
MGI SNP Detail		 Chr1:16591174 Tssr11040 911 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580933892
MGI SNP Detail		 Chr1:16591216 Tssr11040 953 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583305238
MGI SNP Detail		 Chr1:16591220 Tssr11040 957 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264549929
MGI SNP Detail		 Chr1:16591252 Tssr11040 989 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs223899627
MGI SNP Detail		 Chr1:16591258 Tssr11040 995 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243419562
MGI SNP Detail		 Chr1:16591259 Tssr11040 996 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212612471
MGI SNP Detail		 Chr1:16591289 Tssr11040 1026 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231091288
MGI SNP Detail		 Chr1:16591322 Tssr11040 1059 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251300311
MGI SNP Detail		 Chr1:16591342 Tssr11040 1079 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215845749
MGI SNP Detail		 Chr1:16591394 Tssr11040 1131 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238578798
MGI SNP Detail		 Chr1:16591402 Tssr11040 1139 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263697390
MGI SNP Detail		 Chr1:16591481 Tssr11040 1218 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586959170
MGI SNP Detail		 Chr1:16591619 Tssr11040 1356 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581306646
MGI SNP Detail		 Chr1:16591622 Tssr11040 1359 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226541439
MGI SNP Detail		 Chr1:16591662 Tssr11040 1399 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229895501
MGI SNP Detail		 Chr1:16591664 Tssr11040 1401 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs250407482
MGI SNP Detail		 Chr1:16591760 Tssr11040 1497 bp upstream
 SNP A/C/T T T T T C T T T T C T T T T T T T T T C T T C T T T T C T T T T C T T T C T T C T T T T T T T A T T C
rs219634127
MGI SNP Detail		 Chr1:16591838 Tssr11040 1575 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239744743
MGI SNP Detail		 Chr1:16591887 Tssr11040 1624 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263274270
MGI SNP Detail		 Chr1:16591888 Tssr11040 1625 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225446321
MGI SNP Detail		 Chr1:16591948 Tssr11040 1685 bp upstream
 SNP C/T T T T T C T T T T C T T T T T T T T T C T T C T T T T C T C T T T C T T T C T T C T T T T T T T C T T C C
rs247613008
MGI SNP Detail		 Chr1:16591962 Tssr11040 1699 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50509569
MGI SNP Detail		 Chr1:16592051 Tssr11040 1788 bp upstream
 SNP A/C A A C C C C C
rs223722962
MGI SNP Detail		 Chr1:16592065 Tssr11040 1802 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48355041
MGI SNP Detail		 Chr1:16592103 Tssr11040 1840 bp upstream
 SNP A/G G A G G G
rs255767819
MGI SNP Detail		 Chr1:16592128 Tssr11040 1865 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51939121
MGI SNP Detail		 Chr1:16592151 Tssr11040 1888 bp upstream
 SNP C/G C C C C C G C
rs51484316
MGI SNP Detail		 Chr1:16592156 Tssr11040 1893 bp upstream
 SNP C/T C C T C C C C C
rs215275249
MGI SNP Detail		 Chr1:16592168 Tssr11040 1905 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232854988
MGI SNP Detail		 Chr1:16592195 Tssr11040 1932 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 100 of 102
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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