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Mouse SNP Summary
Symbol
Name
ID 		Tssr11696
transcription start site region 11696
MGI:5939463

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46301756
MGI SNP Detail		 Chr1:54944343 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1980 bp downstream
 SNP G/T T T T T T T T T T T T G T T T
rs262819128
MGI SNP Detail		 Chr1:54944435 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1888 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G G G G G G G G G G A G G G
rs225429348
MGI SNP Detail		 Chr1:54944463 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1860 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243145596
MGI SNP Detail		 Chr1:54944553 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1770 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs212287939
MGI SNP Detail		 Chr1:54944579 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1744 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235338917
MGI SNP Detail		 Chr1:54944619 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1704 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581258270
MGI SNP Detail		 Chr1:54944663 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1660 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254205679
MGI SNP Detail		 Chr1:54944667 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1656 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217461408
MGI SNP Detail		 Chr1:54944677 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1646 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238257580
MGI SNP Detail		 Chr1:54944680 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1643 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262682850
MGI SNP Detail		 Chr1:54944730 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1593 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222923301
MGI SNP Detail		 Chr1:54944869 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1454 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47431516
MGI SNP Detail		 Chr1:54944913 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1410 bp downstream
 SNP C/T C C C C C C C C C C C T T C T
rs250089560
MGI SNP Detail		 Chr1:54944945 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1378 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217964655
MGI SNP Detail		 Chr1:54945111 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1212 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs242528394
MGI SNP Detail		 Chr1:54945116 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1207 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260141626
MGI SNP Detail		 Chr1:54945206 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1117 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs224988527
MGI SNP Detail		 Chr1:54945207 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1116 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245050980
MGI SNP Detail		 Chr1:54945208 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1115 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs6179543
MGI SNP Detail		 Chr1:54945218 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1105 bp downstream
 SNP C/G G G G G G G G C C G G G C G G C G
rs6179581
MGI SNP Detail		 Chr1:54945240 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1083 bp downstream
 SNP A/G G A
rs225242218
MGI SNP Detail		 Chr1:54945241 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1082 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G G G G G G G G G G A G G G
rs236804632
MGI SNP Detail		 Chr1:54945255 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1068 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253937792
MGI SNP Detail		 Chr1:54945256 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1067 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs6179593
MGI SNP Detail		 Chr1:54945259 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1064 bp downstream
 SNP A/G A A A A A A A G G A A A A A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259313923
MGI SNP Detail		 Chr1:54945275 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1048 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T G G G G G G G G G G G G T G
rs217112995
MGI SNP Detail		 Chr1:54945280 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1043 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6180006
MGI SNP Detail		 Chr1:54945283 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1040 bp downstream
 SNP C/T C T
rs251751229
MGI SNP Detail		 Chr1:54945297 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 1026 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214021904
MGI SNP Detail		 Chr1:54945327 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 996 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231079391
MGI SNP Detail		 Chr1:54945390 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 933 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250129212
MGI SNP Detail		 Chr1:54945436 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 887 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48729137
MGI SNP Detail		 Chr1:54945437 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 886 bp downstream
 SNP A/G G G A A G G G G G G A G G A G G G
rs221556983
MGI SNP Detail		 Chr1:54945492 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 831 bp downstream
 SNP A/G G A
rs236163415
MGI SNP Detail		 Chr1:54945504 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 819 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263670614
MGI SNP Detail		 Chr1:54945508 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 815 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224757709
MGI SNP Detail		 Chr1:54945519 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 804 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247684269
MGI SNP Detail		 Chr1:54945527 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 796 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257728160
MGI SNP Detail		 Chr1:54945528 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 795 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219369166
MGI SNP Detail		 Chr1:54945542 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 781 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs236642235
MGI SNP Detail		 Chr1:54945551 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 772 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6181258
MGI SNP Detail		 Chr1:54945558 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 765 bp downstream
 SNP A/G G G G G G G G G A G G G A G G G G
rs46343355
MGI SNP Detail		 Chr1:54945610 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 713 bp downstream
 SNP A/C C C C C C C C C C C C C A C A
rs247519542
MGI SNP Detail		 Chr1:54945648 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 675 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6182241
MGI SNP Detail		 Chr1:54945670 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 653 bp downstream
 SNP A/G A A A A A A A G G A A A A G G G G G G
rs6182347
MGI SNP Detail		 Chr1:54945742 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 581 bp downstream
 SNP A/G A G
rs231795464
MGI SNP Detail		 Chr1:54945821 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 502 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256620048
MGI SNP Detail		 Chr1:54945855 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 468 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A C A C A A A A A A A A A A A C A C A
rs213887989
MGI SNP Detail		 Chr1:54945863 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 460 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225337006
MGI SNP Detail		 Chr1:54945875 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 448 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243839253
MGI SNP Detail		 Chr1:54945890 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 433 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G A A A G G A A G G G G G G G G G G A G A G
rs217768628
MGI SNP Detail		 Chr1:54945945 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 378 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242722922
MGI SNP Detail		 Chr1:54945975 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 348 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259920604
MGI SNP Detail		 Chr1:54945989 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 334 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216939894
MGI SNP Detail		 Chr1:54946000 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 323 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237620099
MGI SNP Detail		 Chr1:54946034 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 289 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250391097
MGI SNP Detail		 Chr1:54946058 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 265 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219234214
MGI SNP Detail		 Chr1:54946060 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 263 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230711796
MGI SNP Detail		 Chr1:54946068 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 255 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs248182953
MGI SNP Detail		 Chr1:54946069 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 254 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222634836
MGI SNP Detail		 Chr1:54946075 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 248 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs250302750
MGI SNP Detail		 Chr1:54946100 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 223 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263593203
MGI SNP Detail		 Chr1:54946122 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 201 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51367175
MGI SNP Detail		 Chr1:54946136 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 187 bp downstream
 SNP A/C A A A A A A C A A A A A A A A
rs244273567
MGI SNP Detail		 Chr1:54946146 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 177 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257824282
MGI SNP Detail		 Chr1:54946276 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 47 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225273625
MGI SNP Detail		 Chr1:54946350 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 16 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G A A G G G G A A A G G A A G A G G G G G G G G A G A G
rs243785222
MGI SNP Detail		 Chr1:54946360 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 26 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C A C A C C A A C C C C C C C C C C A C A C
rs261583164
MGI SNP Detail		 Chr1:54946371 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 37 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C A C A C C A A C C C C C C C C C C A C A C
rs233452880
MGI SNP Detail		 Chr1:54946373 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 39 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258859517
MGI SNP Detail		 Chr1:54946393 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 59 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs48114927
MGI SNP Detail		 Chr1:54946407 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 73 bp upstream
 SNP A/G A A G G A A A A A G G G G
rs239698608
MGI SNP Detail		 Chr1:54946418 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 84 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C T T C C C C T T T C C T T C T C C C C C C C C T C T C
rs46475979
MGI SNP Detail		 Chr1:54946428 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 94 bp upstream
 SNP C/T C C C C C T T T T T T
rs244330715
MGI SNP Detail		 Chr1:54946436 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 102 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C T T T C C T T C T C C C C C C C C T C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213437255
MGI SNP Detail		 Chr1:54946437 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 103 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs45948298
MGI SNP Detail		 Chr1:54946466 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 132 bp upstream
 SNP A/G G G G G G G A G G G A A A A A
rs47093619
MGI SNP Detail		 Chr1:54946494 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 160 bp upstream
 SNP A/G A A A A A A G A A A G G G G G
rs227142400
MGI SNP Detail		 Chr1:54946589 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 255 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47262943
MGI SNP Detail		 Chr1:54946593 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 259 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs46904088
MGI SNP Detail		 Chr1:54946671 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 337 bp upstream
 SNP A/C A A A A A A C A A A C C
rs263399840
MGI SNP Detail		 Chr1:54946675 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 341 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A G G A A A A G G G A A G G A G A A A A A A A A G A G A
rs51837924
MGI SNP Detail		 Chr1:54946705 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 371 bp upstream
 SNP C/T T T T T T T C T T T C C C C C
rs49006361
MGI SNP Detail		 Chr1:54946735 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 401 bp upstream
 SNP C/T T T T T T T C T T T C C C C C
rs582113503
MGI SNP Detail		 Chr1:54946761 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 427 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs257758157
MGI SNP Detail		 Chr1:54946762 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 428 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C T T C C C C T T T C C T T C T C C C C C C C C T C T C
rs219002810
MGI SNP Detail		 Chr1:54946765 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 431 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G A A G G G G A A A G G A A G A G G G G G G G G A G A G
rs237574057
MGI SNP Detail		 Chr1:54946766 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 432 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A C C A A A A C C C A A C C A C A A A A A A A C C A C A
rs261457330
MGI SNP Detail		 Chr1:54946767 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 433 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G A A A G G A A G A G G G G G G G G A G A G
rs234503893
MGI SNP Detail		 Chr1:54946769 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 435 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T A A T T T T A A A T T A A T A T T T T T T T T A T A T
rs51541476
MGI SNP Detail		 Chr1:54946796 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 462 bp upstream
 SNP C/G C C C C C C G C C C C C C C C
rs265632616
MGI SNP Detail		 Chr1:54946807 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 473 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231398415
MGI SNP Detail		 Chr1:54946857 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 523 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46820885
MGI SNP Detail		 Chr1:54946889 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 555 bp upstream
 SNP A/G A A A A A A A A A A G G G G G
rs47593717
MGI SNP Detail		 Chr1:54946899 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 565 bp upstream
 SNP A/G A A A A A A G A A A G G
rs584210072
MGI SNP Detail		 Chr1:54946953 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 619 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230479912
MGI SNP Detail		 Chr1:54946965 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 631 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242213871
MGI SNP Detail		 Chr1:54946967 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 633 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218938348
MGI SNP Detail		 Chr1:54946999 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 665 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs51873436
MGI SNP Detail		 Chr1:54947083 Ankrd44 within coordinates of
Rr1418 within coordinates of
Tssr11696 749 bp upstream
 SNP A/C A A A A A A A A A A C C C C C
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Showing SNP(s) 1 - 100 of 128
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory