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Mouse SNP Summary
Symbol
Name
ID 		Tssr11733
transcription start site region 11733
MGI:5939500

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Showing SNP(s) 1 - 62 of 62

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212344205
MGI SNP Detail		 Chr1:56674582 Gm70103 within coordinates of
Tssr11733 1985 bp downstream
 SNP A/T T A
rs212965989
MGI SNP Detail		 Chr1:56674755 Gm70103 within coordinates of
Tssr11733 1812 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230114002
MGI SNP Detail		 Chr1:56674808 Gm70103 within coordinates of
Tssr11733 1759 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254887834
MGI SNP Detail		 Chr1:56674858 Gm70103 within coordinates of
Tssr11733 1709 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs235442479
MGI SNP Detail		 Chr1:56674951 Gm70103 within coordinates of
Tssr11733 1616 bp downstream
 SNP A/G A G
rs239342611
MGI SNP Detail		 Chr1:56675098 Gm70103 within coordinates of
Tssr11733 1469 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263301278
MGI SNP Detail		 Chr1:56675158 Gm70103 within coordinates of
Tssr11733 1409 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224178563
MGI SNP Detail		 Chr1:56675162 Gm70103 within coordinates of
Tssr11733 1405 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263834847
MGI SNP Detail		 Chr1:56675165 Gm70103 within coordinates of
Tssr11733 1402 bp downstream
 SNP A/G G A
rs250877038
MGI SNP Detail		 Chr1:56675187 Gm70103 within coordinates of
Tssr11733 1380 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs218586139
MGI SNP Detail		 Chr1:56675202 Gm70103 within coordinates of
Tssr11733 1365 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236935853
MGI SNP Detail		 Chr1:56675212 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1355 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs264324888
MGI SNP Detail		 Chr1:56675300 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1267 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37228149
MGI SNP Detail		 Chr1:56675312 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1255 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs36904637
MGI SNP Detail		 Chr1:56675341 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1226 bp downstream
 SNP C/T C C T T C C T C C C T T T C T C C
rs265588074
MGI SNP Detail		 Chr1:56675355 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1212 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226403181
MGI SNP Detail		 Chr1:56675441 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1126 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38171831
MGI SNP Detail		 Chr1:56675493 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 1074 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
rs244184500
MGI SNP Detail		 Chr1:56675664 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 903 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254663332
MGI SNP Detail		 Chr1:56675673 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 894 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223583923
MGI SNP Detail		 Chr1:56675706 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 861 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36787684
MGI SNP Detail		 Chr1:56675711 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 856 bp downstream
 SNP C/G C C C C C C C C C C G C C G C
rs240012272
MGI SNP Detail		 Chr1:56675909 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 658 bp downstream
 SNP A/T T A
rs241356805
MGI SNP Detail		 Chr1:56676461 Gm70103 within coordinates of
Hsfy2 within coordinates of
Tssr11733 106 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253035192
MGI SNP Detail		 Chr1:56676639 Gm70103 within coordinates of
Tssr11733 65 bp upstream
Tssr11737 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215066773
MGI SNP Detail		 Chr1:56676715 Gm70103 within coordinates of
Tssr11733 141 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs583310220
MGI SNP Detail		 Chr1:56676716 Gm70103 within coordinates of
Tssr11733 142 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232724207
MGI SNP Detail		 Chr1:56676721 Gm70103 within coordinates of
Tssr11733 147 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs36855393
MGI SNP Detail		 Chr1:56676745 Gm70103 within coordinates of
Tssr11733 171 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs212517808
MGI SNP Detail		 Chr1:56676764 Gm70103 within coordinates of
Tssr11733 190 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A
rs38129021
MGI SNP Detail		 Chr1:56676792 Gm70103 within coordinates of
Tssr11733 218 bp upstream
 SNP C/G C C G G C C C C C C G C G C C C C
rs264053762
MGI SNP Detail		 Chr1:56676793 Gm70103 within coordinates of
Tssr11733 219 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs225529021
MGI SNP Detail		 Chr1:56676816 Gm70103 within coordinates of
Tssr11733 242 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs248731714
MGI SNP Detail		 Chr1:56676820 Gm70103 within coordinates of
Tssr11733 246 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258870101
MGI SNP Detail		 Chr1:56676824 Gm70103 within coordinates of
Tssr11733 250 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs220289546
MGI SNP Detail		 Chr1:56676911 Gm70103 within coordinates of
Tssr11733 337 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237927738
MGI SNP Detail		 Chr1:56676915 Gm70103 within coordinates of
Tssr11733 341 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs219673561
MGI SNP Detail		 Chr1:56676919 Gm70103 within coordinates of
Tssr11733 345 bp upstream
 SNP C/T C T
rs223895754
MGI SNP Detail		 Chr1:56676938 Gm70103 within coordinates of
Tssr11733 364 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248400840
MGI SNP Detail		 Chr1:56676985 Gm70103 within coordinates of
Tssr11733 411 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265956757
MGI SNP Detail		 Chr1:56677021 Gm70103 within coordinates of
Tssr11733 447 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T C T T T T
rs232503768
MGI SNP Detail		 Chr1:56677196 Gm70103 within coordinates of
Tssr11733 622 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257488378
MGI SNP Detail		 Chr1:56677211 Gm70103 within coordinates of
Tssr11733 637 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215028580
MGI SNP Detail		 Chr1:56677226 Gm70103 within coordinates of
Tssr11733 652 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs226460502
MGI SNP Detail		 Chr1:56677313 Gm70103 within coordinates of
Tssr11733 739 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244906372
MGI SNP Detail		 Chr1:56677352 Gm70103 within coordinates of
Tssr11733 778 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs37495698
MGI SNP Detail		 Chr1:56677365 Gm70103 within coordinates of
Tssr11733 791 bp upstream
 SNP C/T T T T T T T C T T T T T T T
rs236248363
MGI SNP Detail		 Chr1:56677386 Gm70103 within coordinates of
Tssr11733 812 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G A
rs4137627
MGI SNP Detail		 Chr1:56677585 Gm70103 within coordinates of
Tssr11733 1011 bp upstream
 SNP C/T C C T T C C C C C C C T T T C T C C
rs4138537
MGI SNP Detail		 Chr1:56677639 Gm70103 within coordinates of
Tssr11733 1065 bp upstream
 SNP C/T T C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586949147
MGI SNP Detail		 Chr1:56677641 Gm70103 within coordinates of
Tssr11733 1067 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs217714783
MGI SNP Detail		 Chr1:56677645 Gm70103 within coordinates of
Tssr11733 1071 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238418342
MGI SNP Detail		 Chr1:56677768 Gm70103 within coordinates of
Tssr11733 1194 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs251045519
MGI SNP Detail		 Chr1:56677808 Gm70103 within coordinates of
Tssr11733 1234 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219894487
MGI SNP Detail		 Chr1:56677819 Gm70103 within coordinates of
Tssr11733 1245 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237841075
MGI SNP Detail		 Chr1:56678024 Gm70103 within coordinates of
Tssr11733 1450 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A C A A A A A A A C A A A A
rs249216915
MGI SNP Detail		 Chr1:56678192 Gm70103 within coordinates of
Tssr11733 1618 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218286092
MGI SNP Detail		 Chr1:56678238 Gm70103 within coordinates of
Tssr11733 1664 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251862035
MGI SNP Detail		 Chr1:56678278 Gm70103 within coordinates of
Tssr11733 1704 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264038934
MGI SNP Detail		 Chr1:56678289 Gm70103 within coordinates of
Tssr11733 1715 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs37167097
MGI SNP Detail		 Chr1:56678473 Gm70103 within coordinates of
Tssr11733 1899 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs36366501
MGI SNP Detail		 Chr1:56678574 Tssr11733 2000 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
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Showing SNP(s) 1 - 62 of 62
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory