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Mouse SNP Summary
Symbol
Name
ID 		Tssr12013
transcription start site region 12013
MGI:5939780

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Showing SNP(s) 1 - 46 of 46

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs32762541
MGI SNP Detail		 Chr1:66900525 Acadl within coordinates of
Tssr12013 1929 bp downstream
 SNP C/T T T T C T T T
rs32333389
MGI SNP Detail		 Chr1:66900546 Acadl within coordinates of
Tssr12013 1908 bp downstream
 SNP A/G A G G G A
rs32203698
MGI SNP Detail		 Chr1:66900637 Acadl within coordinates of
Tssr12013 1817 bp downstream
 SNP C/T C C T C C
rs32498805
MGI SNP Detail		 Chr1:66900643 Acadl within coordinates of
Tssr12013 1811 bp downstream
 SNP C/T C C T C C
rs31520117
MGI SNP Detail		 Chr1:66900892 Acadl within coordinates of
Tssr12013 1562 bp downstream
 SNP G/T T T G T T
rs32432509
MGI SNP Detail		 Chr1:66900960 Acadl within coordinates of
Tssr12013 1494 bp downstream
 SNP A/T A A T A A
rs31689999
MGI SNP Detail		 Chr1:66900988 Acadl within coordinates of
Rr412477 within coordinates of
Tssr12013 1466 bp downstream
 SNP A/G G G A G G
rs32661852
MGI SNP Detail		 Chr1:66901031 Acadl within coordinates of
Rr412477 within coordinates of
Tssr12013 1423 bp downstream
 SNP G/T T T G G T
rs31875513
MGI SNP Detail		 Chr1:66901226 Acadl within coordinates of
Rr412477 within coordinates of
Tssr12013 1228 bp downstream
 SNP A/G G G A G G G
rs31401492
MGI SNP Detail		 Chr1:66901381 Acadl within coordinates of
Tssr12013 1073 bp downstream
 SNP G/T G G T T G T G
rs31106823
MGI SNP Detail		 Chr1:66901507 Acadl within coordinates of
Rr412478 within coordinates of
Tssr12013 947 bp downstream
 SNP G/T T T T G T T
rs46636808
MGI SNP Detail		 Chr1:66901802 Acadl within coordinates of
Rr412478 within coordinates of
Tssr12013 652 bp downstream
 SNP C C C C C
rs45668875
MGI SNP Detail		 Chr1:66901871 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 583 bp downstream
 SNP C C C C
rs48120628
MGI SNP Detail		 Chr1:66901872 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 582 bp downstream
 SNP T T T T
rs32296941
MGI SNP Detail		 Chr1:66901999 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 455 bp downstream
 SNP C/T T T T C T T T
rs50769170
MGI SNP Detail		 Chr1:66902017 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 437 bp downstream
 SNP C C C C C
rs51739535
MGI SNP Detail		 Chr1:66902242 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 212 bp downstream
 SNP A A A
rs46218380
MGI SNP Detail		 Chr1:66902299 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 155 bp downstream
 SNP A/G G A
rs51887868
MGI SNP Detail		 Chr1:66902305 Acadl within coordinates of
Cpgi339 within coordinates of
Rr412478 within coordinates of
Tssr12013 149 bp downstream
 SNP C/G G C
rs49893568
MGI SNP Detail		 Chr1:66902595 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 139 bp upstream
 SNP G G G
rs51290378
MGI SNP Detail		 Chr1:66902599 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 143 bp upstream
 SNP C C C
rs47365317
MGI SNP Detail		 Chr1:66902693 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 237 bp upstream
 SNP T T T T T T
rs51889165
MGI SNP Detail		 Chr1:66902694 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 238 bp upstream
 SNP C C C C C C
rs49519898
MGI SNP Detail		 Chr1:66902738 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 282 bp upstream
 SNP T T T T T T
rs51850346
MGI SNP Detail		 Chr1:66902750 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 294 bp upstream
 SNP G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs222201228
MGI SNP Detail		 Chr1:66902788 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 332 bp upstream
 SNP A A A
rs47910971
MGI SNP Detail		 Chr1:66902836 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 380 bp upstream
 SNP A A A A A A
rs49321046
MGI SNP Detail		 Chr1:66902842 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 386 bp upstream
 SNP G G G G G G
rs46007264
MGI SNP Detail		 Chr1:66902857 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 401 bp upstream
 SNP G G G G G G
rs51230074
MGI SNP Detail		 Chr1:66902861 Cpgi339 within coordinates of
Rr412479 within coordinates of
Tssr12013 405 bp upstream
 SNP T T T T T T
rs48195874
MGI SNP Detail		 Chr1:66903013 Tssr12013 557 bp upstream
 SNP A/C A A C A
rs51796560
MGI SNP Detail		 Chr1:66903108 Tssr12013 652 bp upstream
 SNP T T T T T
rs50124643
MGI SNP Detail		 Chr1:66903343 Tssr12013 887 bp upstream
 SNP A/T A T
rs47334727
MGI SNP Detail		 Chr1:66903420 Tssr12013 964 bp upstream
 SNP A A A
rs228798595
MGI SNP Detail		 Chr1:66903492 Tssr12013 1036 bp upstream
 SNP A/G A G
rs240822118
MGI SNP Detail		 Chr1:66903689 Tssr12013 1233 bp upstream
 SNP A/G G A
rs45847979
MGI SNP Detail		 Chr1:66903743 Tssr12013 1287 bp upstream
 SNP G G G G G
rs49955075
MGI SNP Detail		 Chr1:66903813 Tssr12013 1357 bp upstream
 SNP A/C A C
rs47732302
MGI SNP Detail		 Chr1:66903923 Tssr12013 1467 bp upstream
 SNP G G G G G G
rs47064631
MGI SNP Detail		 Chr1:66904021 Tssr12013 1565 bp upstream
 SNP A A A A A A
rs47195279
MGI SNP Detail		 Chr1:66904132 Tssr12013 1676 bp upstream
 SNP C/T T T T C T
rs47480470
MGI SNP Detail		 Chr1:66904144 Tssr12013 1688 bp upstream
 SNP A A A A A
rs48757490
MGI SNP Detail		 Chr1:66904231 Tssr12013 1775 bp upstream
 SNP C C C C C
rs51352781
MGI SNP Detail		 Chr1:66904289 Tssr12013 1833 bp upstream
 SNP C C C C C C
rs50365889
MGI SNP Detail		 Chr1:66904331 Tssr12013 1875 bp upstream
 SNP G G G G G G
rs49087518
MGI SNP Detail		 Chr1:66904432 Tssr12013 1976 bp upstream
 SNP C C C C C C
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Showing SNP(s) 1 - 46 of 46
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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