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Mouse SNP Summary
Symbol
Name
ID
Tssr12355
transcription start site region 12355
MGI:5940122

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243948789
MGI SNP Detail
Chr1:75116388 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1985 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217247203
MGI SNP Detail
Chr1:75116415 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1958 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238670938
MGI SNP Detail
Chr1:75116440 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1933 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262862728
MGI SNP Detail
Chr1:75116473 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1900 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32644549
MGI SNP Detail
Chr1:75116586 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1787 bp downstream
SNP C/T T C C T T
rs241891312
MGI SNP Detail
Chr1:75116682 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1691 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250281759
MGI SNP Detail
Chr1:75116772 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1601 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217990623
MGI SNP Detail
Chr1:75116852 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1521 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239473641
MGI SNP Detail
Chr1:75116854 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1519 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250926651
MGI SNP Detail
Chr1:75116860 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1513 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224721374
MGI SNP Detail
Chr1:75116897 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1476 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245830072
MGI SNP Detail
Chr1:75116908 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1465 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs266233200
MGI SNP Detail
Chr1:75116927 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1446 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs587003654
MGI SNP Detail
Chr1:75116950 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1423 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226165213
MGI SNP Detail
Chr1:75117005 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1368 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237004567
MGI SNP Detail
Chr1:75117081 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1292 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254148097
MGI SNP Detail
Chr1:75117183 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1190 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226303229
MGI SNP Detail
Chr1:75117230 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1143 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243961539
MGI SNP Detail
Chr1:75117232 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1141 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263612767
MGI SNP Detail
Chr1:75117246 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 1127 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580593443
MGI SNP Detail
Chr1:75117529 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 844 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T C T T C T T T
rs232189812
MGI SNP Detail
Chr1:75117718 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 655 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252261987
MGI SNP Detail
Chr1:75117730 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 643 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219097810
MGI SNP Detail
Chr1:75117774 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 599 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235509292
MGI SNP Detail
Chr1:75117791 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 582 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244194870
MGI SNP Detail
Chr1:75117829 Cnppd1 within coordinates of
Rr29646 within coordinates of
Tssr12355 544 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211899300
MGI SNP Detail
Chr1:75118005 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Rr29646 within coordinates of
Tssr12355 368 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232516406
MGI SNP Detail
Chr1:75118039 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Rr29646 within coordinates of
Tssr12355 334 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250983152
MGI SNP Detail
Chr1:75118108 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Rr29646 within coordinates of
Tssr12355 265 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224676373
MGI SNP Detail
Chr1:75118123 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Rr29646 within coordinates of
Tssr12355 250 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs239608641
MGI SNP Detail
Chr1:75118304 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 69 bp downstream
Tssr7484 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260616339
MGI SNP Detail
Chr1:75118318 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 55 bp downstream
Tssr7484 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C A A C C C C C C C C C
rs226707234
MGI SNP Detail
Chr1:75118332 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 41 bp downstream
Tssr7484 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237068735
MGI SNP Detail
Chr1:75118388 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 1 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254158916
MGI SNP Detail
Chr1:75118471 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 84 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579224583
MGI SNP Detail
Chr1:75118506 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 119 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220236509
MGI SNP Detail
Chr1:75118573 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 186 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs237780907
MGI SNP Detail
Chr1:75118684 Cnppd1 within coordinates of
Cpgi410 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 297 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265750796
MGI SNP Detail
Chr1:75118779 Cnppd1 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 392 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231798646
MGI SNP Detail
Chr1:75118805 Cnppd1 within coordinates of
Gm57175 within coordinates of
Rr29646 within coordinates of
Tssr12355 418 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260333494
MGI SNP Detail
Chr1:75118952 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 565 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264054354
MGI SNP Detail
Chr1:75119121 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 734 bp upstream
Tssr7486 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228537075
MGI SNP Detail
Chr1:75119124 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 737 bp upstream
Tssr7486 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244206599
MGI SNP Detail
Chr1:75119183 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 796 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G G G G G G G G G G G
rs211962778
MGI SNP Detail
Chr1:75119318 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 931 bp upstream
Tssr12359 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A A A A A C A A A A A A C A A A A
rs232592128
MGI SNP Detail
Chr1:75119319 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 932 bp upstream
Tssr12359 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250567252
MGI SNP Detail
Chr1:75119353 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 966 bp upstream
Tssr12359 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs216930459
MGI SNP Detail
Chr1:75119370 Cnppd1 within coordinates of
Cpgi411 within coordinates of
Rr29646 within coordinates of
Tssr12355 983 bp upstream
Tssr7488 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237650196
MGI SNP Detail
Chr1:75119502 Cpgi411 within coordinates of
Retreg2 within coordinates of
Rr29646 within coordinates of
Tssr12355 1115 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264057925
MGI SNP Detail
Chr1:75119785 Cpgi411 within coordinates of
Retreg2 within coordinates of
Rr29646 within coordinates of
Tssr12355 1398 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221727743
MGI SNP Detail
Chr1:75119824 Cpgi411 within coordinates of
Retreg2 within coordinates of
Rr29646 within coordinates of
Tssr12355 1437 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231049676
MGI SNP Detail
Chr1:75120158 Retreg2 within coordinates of
Rr29646 within coordinates of
Tssr12355 1771 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs51352044
MGI SNP Detail
Chr1:75120266 Retreg2 within coordinates of
Rr29646 within coordinates of
Tssr12355 1879 bp upstream
SNP A/G G G A
rs248499854
MGI SNP Detail
Chr1:75120289 Retreg2 within coordinates of
Rr29646 within coordinates of
Tssr12355 1902 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 54 of 54

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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