About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr14479
transcription start site region 14479
MGI:5942246

<< first < prev1 next > last >>
Showing SNP(s) 1 - 64 of 64

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250983481
MGI SNP Detail		 Chr1:156765235 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1963 bp downstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48860457
MGI SNP Detail		 Chr1:156765237 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1961 bp downstream
 SNP A A A
rs49056219
MGI SNP Detail		 Chr1:156765247 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1951 bp downstream
 SNP C C C
rs51514089
MGI SNP Detail		 Chr1:156765248 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1950 bp downstream
 SNP A A A
rs46790502
MGI SNP Detail		 Chr1:156765254 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1944 bp downstream
 SNP G G G
rs51652335
MGI SNP Detail		 Chr1:156765298 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1900 bp downstream
 SNP A A A
rs50726864
MGI SNP Detail		 Chr1:156765376 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1822 bp downstream
 SNP T T T
rs47238017
MGI SNP Detail		 Chr1:156765377 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1821 bp downstream
 SNP T T T
rs581105631
MGI SNP Detail		 Chr1:156765403 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1795 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31264481
MGI SNP Detail		 Chr1:156765707 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1491 bp downstream
 SNP C/T T C C C C T C C C C C T
rs213778052
MGI SNP Detail		 Chr1:156765742 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1456 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47847883
MGI SNP Detail		 Chr1:156765756 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1442 bp downstream
 SNP A/G G A A A
rs50102715
MGI SNP Detail		 Chr1:156765760 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1438 bp downstream
 SNP A A A A
rs46112254
MGI SNP Detail		 Chr1:156765811 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1387 bp downstream
 SNP A/G G A A
rs46741022
MGI SNP Detail		 Chr1:156765824 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1374 bp downstream
 SNP C C C C
rs46210660
MGI SNP Detail		 Chr1:156765826 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1372 bp downstream
 SNP C/T C T T
rs216198606
MGI SNP Detail		 Chr1:156765838 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1360 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46370486
MGI SNP Detail		 Chr1:156765845 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1353 bp downstream
 SNP G G G
rs46359764
MGI SNP Detail		 Chr1:156765865 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1333 bp downstream
 SNP A/G A G G
rs218658088
MGI SNP Detail		 Chr1:156765922 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1276 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31264480
MGI SNP Detail		 Chr1:156765924 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1274 bp downstream
 SNP A/G A G G A G G G A
rs260624266
MGI SNP Detail		 Chr1:156766081 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 1117 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225823997
MGI SNP Detail		 Chr1:156766256 Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 942 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C A C C C C C C C C C C C C C C C C C C A C C C A
rs245986845
MGI SNP Detail		 Chr1:156766296 Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 902 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs265488449
MGI SNP Detail		 Chr1:156766299 Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 899 bp downstream
 SNP C/T C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226064039
MGI SNP Detail		 Chr1:156766390 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Rr367037 within coordinates of
Tssr14476 within coordinates of
Tssr14479 808 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237349254
MGI SNP Detail		 Chr1:156766395 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Rr367037 within coordinates of
Tssr14476 within coordinates of
Tssr14479 803 bp downstream
 SNP A/G G G G A A G A A G G A A G G G G A A A A A A A A A A A A G A G G A A G G A A G A A G G A A G G G A A G G A
rs31843043
MGI SNP Detail		 Chr1:156766434 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Rr367037 within coordinates of
Tssr14479 764 bp downstream
 SNP A/C A C C A
rs224565886
MGI SNP Detail		 Chr1:156766453 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Rr367037 within coordinates of
Tssr14479 745 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242511538
MGI SNP Detail		 Chr1:156766573 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 625 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs219258227
MGI SNP Detail		 Chr1:156766665 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 533 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234131037
MGI SNP Detail		 Chr1:156766769 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 429 bp downstream
 SNP A/G A G G A G G A A G A A A G G G G G G G A A A G G A A G G A G G A A G G A A A G G A A
rs253255652
MGI SNP Detail		 Chr1:156766908 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 290 bp downstream
 SNP C/G C C C C C C C C C C C C C C G C C C C C C C C C C G C C C C C C C C
rs216582708
MGI SNP Detail		 Chr1:156767074 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 124 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233394344
MGI SNP Detail		 Chr1:156767082 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14479 116 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs251462041
MGI SNP Detail		 Chr1:156767108 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Ralgps2 within coordinates of
Rr28786 within coordinates of
Tssr14477 within coordinates of
Tssr14479 90 bp downstream
 SNP G/T T G G T G G T G T T T G G G G G G G T G G G T T G G G T T G T T G G T G G
rs213193056
MGI SNP Detail		 Chr1:156767267 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Rr28786 within coordinates of
Tssr14479 40 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G
rs229734770
MGI SNP Detail		 Chr1:156767386 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Rr28786 within coordinates of
Tssr14479 159 bp upstream
 SNP C/G C C G C C G G C C C C C C C G G G C C G G G C G G C C C G G C C G G C G G C C C G C C C G G C C
rs264075464
MGI SNP Detail		 Chr1:156767493 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Rr28786 within coordinates of
Tssr14479 266 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs48694642
MGI SNP Detail		 Chr1:156767745 4930439D14Rik within coordinates of
Cpgi904 within coordinates of
Rr28786 within coordinates of
Tssr14479 518 bp upstream
 SNP T T
rs51995568
MGI SNP Detail		 Chr1:156767844 Rr28786 within coordinates of
Tssr14479 617 bp upstream
 SNP A A A
rs48955459
MGI SNP Detail		 Chr1:156767868 Rr28786 within coordinates of
Tssr14479 641 bp upstream
 SNP A A A
rs584615900
MGI SNP Detail		 Chr1:156767944 Rr28786 within coordinates of
Tssr14479 717 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T
rs220015903
MGI SNP Detail		 Chr1:156768022 Rr28786 within coordinates of
Tssr14479 795 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs229556023
MGI SNP Detail		 Chr1:156768025 Rr28786 within coordinates of
Tssr14479 798 bp upstream
 SNP A/T A T
rs254499938
MGI SNP Detail		 Chr1:156768095 Rr28786 within coordinates of
Tssr14479 868 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46655743
MGI SNP Detail		 Chr1:156768147 Rr28786 within coordinates of
Tssr14479 920 bp upstream
 SNP C C C
rs47457046
MGI SNP Detail		 Chr1:156768210 Rr28786 within coordinates of
Tssr14479 983 bp upstream
 SNP T T T
rs46912053
MGI SNP Detail		 Chr1:156768240 Rr28786 within coordinates of
Tssr14479 1013 bp upstream
 SNP G G G
rs45834953
MGI SNP Detail		 Chr1:156768269 Rr28786 within coordinates of
Tssr14479 1042 bp upstream
 SNP C/G C C C G C C G G C C C C C C C C G G G G C C G G G C G G C G C C G G C C G G C G G C C C G C C C C G C C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs45746258
MGI SNP Detail		 Chr1:156768270 Rr28786 within coordinates of
Tssr14479 1043 bp upstream
 SNP A/G A A A G A A G G A A A A A A A A G G G G A A G G G A G G A G A A G G A A G G A G G A A A G A A A A G A A G
rs259234964
MGI SNP Detail		 Chr1:156768287 Rr28786 within coordinates of
Tssr14479 1060 bp upstream
 SNP C/T T T T C T C C C T T T T C C C C C C C C T T C C C T C C T C C C C C T T C C T C C T T T C T C C C T C C
rs226932686
MGI SNP Detail		 Chr1:156768376 Rr28786 within coordinates of
Tssr14479 1149 bp upstream
 SNP A/T T T T A T T A A T T T T T T T T A A A A T T A A A T A A T A T T A A T T A A T A A T T T A T T T A A T T A
rs578535540
MGI SNP Detail		 Chr1:156768428 Rr28786 within coordinates of
Tssr14479 1201 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245372603
MGI SNP Detail		 Chr1:156768451 Rr28786 within coordinates of
Tssr14479 1224 bp upstream
 SNP A/C C C C A C C A A C C C C C C C C A A A A C C A A A C A A C A C C A A C C A A C A A C C C A C C C A C C A
rs213268254
MGI SNP Detail		 Chr1:156768586 Rr28786 within coordinates of
Tssr14479 1359 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581958734
MGI SNP Detail		 Chr1:156768658 Tssr14479 1431 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52605610
MGI SNP Detail		 Chr1:156768692 Tssr14479 1465 bp upstream
 SNP T T T
rs48025687
MGI SNP Detail		 Chr1:156768754 Tssr14479 1527 bp upstream
 SNP T T T
rs254985129
MGI SNP Detail		 Chr1:156768961 Tssr14479 1734 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs47269061
MGI SNP Detail		 Chr1:156769059 Rr19959 within coordinates of
Tssr14479 1832 bp upstream
 SNP A/G A G G
rs46843583
MGI SNP Detail		 Chr1:156769083 Rr19959 within coordinates of
Tssr14479 1856 bp upstream
 SNP A/T T A A
rs262709716
MGI SNP Detail		 Chr1:156769102 Rr19959 within coordinates of
Tssr14479 1875 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs50205188
MGI SNP Detail		 Chr1:156769180 Rr19959 within coordinates of
Tssr14479 1953 bp upstream
 SNP A/G A G G G A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory