Mouse SNP Summary
|
Symbol Name ID |
Tssr14643
transcription start site region 14643 MGI:5942410 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs217895917 MGI SNP Detail |
Chr1:162533503 | Prrc2c Tssr14643 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | |||
| rs230594498 MGI SNP Detail |
Chr1:162533840 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs252621434 MGI SNP Detail |
Chr1:162533858 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs222612077 MGI SNP Detail |
Chr1:162533947 | Prrc2c Tssr14643 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs238888398 MGI SNP Detail |
Chr1:162533967 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs37113023 MGI SNP Detail |
Chr1:162534077 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | C | T | T | C | C | T | T | T | C | T | T | C | C | C | |||||||||||||||||||||||||||||||||||||||
| rs38626523 MGI SNP Detail |
Chr1:162534106 | Prrc2c Tssr14643 |
SNP | A/G | G | G | G | A | G | G | G | A | G | G | G | G | G | G | G | |||||||||||||||||||||||||||||||||||||||||
| rs243908381 MGI SNP Detail |
Chr1:162534252 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs264540122 MGI SNP Detail |
Chr1:162534257 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs225245256 MGI SNP Detail |
Chr1:162534259 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs248225885 MGI SNP Detail |
Chr1:162534279 | Prrc2c Tssr14643 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | |||
| rs261575463 MGI SNP Detail |
Chr1:162534285 | Prrc2c Tssr14643 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs37293856 MGI SNP Detail |
Chr1:162534322 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | G | A | A | G | G | A | A | A | G | G | A | A | G | G | G | |||||||||||||||||||||||||||||||||||||
| rs258708665 MGI SNP Detail |
Chr1:162534401 | Prrc2c Tssr14643 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | |||
| rs213894112 MGI SNP Detail |
Chr1:162534478 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs51573726 MGI SNP Detail |
Chr1:162534501 | Prrc2c Tssr14643 |
SNP | A/G | G | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs249308627 MGI SNP Detail |
Chr1:162534511 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs213030088 MGI SNP Detail |
Chr1:162534520 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs230603878 MGI SNP Detail |
Chr1:162534555 | Prrc2c Tssr14643 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs51005790 MGI SNP Detail |
Chr1:162534576 | Prrc2c Tssr14643 |
SNP | A | A | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs32556881 MGI SNP Detail |
Chr1:162534621 | Prrc2c Tssr14643 |
SNP | A/C | A | A | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs237892198 MGI SNP Detail |
Chr1:162534695 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs249750889 MGI SNP Detail |
Chr1:162534697 | Prrc2c Tssr14643 |
SNP | C/G | G | C | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs263324977 MGI SNP Detail |
Chr1:162534744 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||||
| rs222292948 MGI SNP Detail |
Chr1:162534760 | Prrc2c Tssr14643 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | ||||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs246462950 MGI SNP Detail |
Chr1:162534815 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||||
| rs255821142 MGI SNP Detail |
Chr1:162534889 | Prrc2c Tssr14643 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs36684777 MGI SNP Detail |
Chr1:162534898 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
| rs242276802 MGI SNP Detail |
Chr1:162535000 | Prrc2c Tssr14643 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | ||||
| rs261509343 MGI SNP Detail |
Chr1:162535019 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs227615221 MGI SNP Detail |
Chr1:162535186 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs253573630 MGI SNP Detail |
Chr1:162535445 | Prrc2c Tssr14643 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs265169066 MGI SNP Detail |
Chr1:162535733 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||||
| rs37000891 MGI SNP Detail |
Chr1:162535883 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
| rs252650992 MGI SNP Detail |
Chr1:162535885 | Prrc2c Tssr14643 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| rs213091614 MGI SNP Detail |
Chr1:162535933 | Prrc2c Tssr14643 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| rs228620491 MGI SNP Detail |
Chr1:162535974 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | G | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||||
| rs36940669 MGI SNP Detail |
Chr1:162536041 | Prrc2c Tssr14643 |
SNP | A/T | A | A | A | T | A | A | A | T | A | A | A | A | A | A | A | |||||||||||||||||||||||||||||||||||||||||
| rs36934975 MGI SNP Detail |
Chr1:162536159 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | ||||||||||||||||||||||||||||||||||||||||||
| rs31773185 MGI SNP Detail |
Chr1:162536168 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | |||||||||||||||||||||||||||||||||||||||
| rs259447793 MGI SNP Detail |
Chr1:162536200 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||||
| rs214112482 MGI SNP Detail |
Chr1:162536232 | Prrc2c Tssr14643 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||||
| rs236686131 MGI SNP Detail |
Chr1:162536247 | Prrc2c Tssr14643 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||||
| rs249246701 MGI SNP Detail |
Chr1:162536299 | Prrc2c Tssr14643 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | |||
| rs212082165 MGI SNP Detail |
Chr1:162536645 | Prrc2c Tssr14643 |
SNP | C/T | C | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs37203196 MGI SNP Detail |
Chr1:162536778 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | G | |||||||||||||||||||||||||||||||||||||||
| rs241813160 MGI SNP Detail |
Chr1:162536821 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs255028990 MGI SNP Detail |
Chr1:162536852 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs36240524 MGI SNP Detail |
Chr1:162536896 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | T | |||||||||||||||||||||||||||||||||||||||
| rs249430227 MGI SNP Detail |
Chr1:162536905 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
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BTBR T<+> Itpr3<tf>/J
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BUB/BnJ
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C3H/HeH
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C3H/HeJ
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C57BL/10J
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C57BL/10SnJ
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C57BL/6J
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C57BL/6NJ
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C57BR/cdJ
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C57L/J
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C58/J
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CAST/EiJ
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CBA/J
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CE/J
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CZECHII/EiJ
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DBA/1J
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DBA/2J
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FVB/NJ
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I/LnJ
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JF1/MsJ
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KK/HlJ
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LEWES/EiJ
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LG/J
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LP/J
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MA/MyJ
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MOLF/EiJ
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MSM/Ms
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NOD/ShiLtJ
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NON/ShiLtJ
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NZB/BlNJ
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NZO/HlLtJ
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NZW/LacJ
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PL/J
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PWD/PhJ
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PWK/PhJ
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QSi3/Ianm
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QSi5/Ianm
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RF/J
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RIIIS/J
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SEA/GnJ
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SJL/J
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SM/J
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SPRET/EiJ
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ST/bJ
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SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs262566887 MGI SNP Detail |
Chr1:162537028 | Prrc2c Tssr14643 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||||
| rs231586420 MGI SNP Detail |
Chr1:162537047 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||||
| rs32349119 MGI SNP Detail |
Chr1:162537065 | Prrc2c Tssr14643 |
SNP | A/G | G | G | G | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs37859984 MGI SNP Detail |
Chr1:162537075 | Prrc2c Tssr14643 |
SNP | A/C | A | A | A | A | A | A | C | A | A | A | A | A | A | |||||||||||||||||||||||||||||||||||||||||||
| rs228494696 MGI SNP Detail |
Chr1:162537244 | Prrc2c Tssr14643 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs247661700 MGI SNP Detail |
Chr1:162537275 | Prrc2c Tssr14643 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs215318428 MGI SNP Detail |
Chr1:162537405 | Prrc2c Tssr14643 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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