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Mouse SNP Summary
Symbol
Name
ID 		Tssr15162
transcription start site region 15162
MGI:5942929

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48928652
MGI SNP Detail		 Chr1:172026270 Pea15a within coordinates of
Tssr15162 1838 bp downstream
 SNP A/G G G A G G A
rs246830343
MGI SNP Detail		 Chr1:172026276 Pea15a within coordinates of
Tssr15162 1832 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262371353
MGI SNP Detail		 Chr1:172026280 Pea15a within coordinates of
Tssr15162 1828 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31573228
MGI SNP Detail		 Chr1:172026296 Pea15a within coordinates of
Tssr15162 1812 bp downstream
 SNP C/T T T T T T C T C C T T T T C T T T T
rs247280960
MGI SNP Detail		 Chr1:172026302 Pea15a within coordinates of
Tssr15162 1806 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G A G
rs259175826
MGI SNP Detail		 Chr1:172026313 Pea15a within coordinates of
Tssr15162 1795 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G
rs229345257
MGI SNP Detail		 Chr1:172026324 Pea15a within coordinates of
Tssr15162 1784 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254137404
MGI SNP Detail		 Chr1:172026340 Pea15a within coordinates of
Tssr15162 1768 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs580043381
MGI SNP Detail		 Chr1:172026385 Pea15a within coordinates of
Tssr15162 1723 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583579691
MGI SNP Detail		 Chr1:172026389 Pea15a within coordinates of
Tssr15162 1719 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31174435
MGI SNP Detail		 Chr1:172026408 Pea15a within coordinates of
Tssr15162 1700 bp downstream
 SNP A/C A A C A A A
rs234984086
MGI SNP Detail		 Chr1:172026434 Pea15a within coordinates of
Tssr15162 1674 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587048525
MGI SNP Detail		 Chr1:172026524 Pea15a within coordinates of
Tssr15162 1584 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs387411869
MGI SNP Detail		 Chr1:172026548 Pea15a within coordinates of
Tssr15162 1560 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G C G C
rs256695788
MGI SNP Detail		 Chr1:172026571 Pea15a within coordinates of
Tssr15162 1537 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584381055
MGI SNP Detail		 Chr1:172026610 Pea15a within coordinates of
Tssr15162 1498 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213969179
MGI SNP Detail		 Chr1:172026627 Pea15a within coordinates of
Tssr15162 1481 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233917213
MGI SNP Detail		 Chr1:172026656 Pea15a within coordinates of
Tssr15162 1452 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250896855
MGI SNP Detail		 Chr1:172026711 Pea15a within coordinates of
Tssr15158 within coordinates of
Tssr15162 1397 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13474172
MGI SNP Detail		 Chr1:172026817 Pea15a within coordinates of
Tssr15162 1291 bp downstream
 SNP A/T A A A A T A T T A T A A T A A A A T
rs241807585
MGI SNP Detail		 Chr1:172027113 Pea15a within coordinates of
Tssr15162 995 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31573225
MGI SNP Detail		 Chr1:172027245 Pea15a within coordinates of
Tssr15162 863 bp downstream
 SNP G/T G G G G G T G T T G T G G T G G G G T
rs31573224
MGI SNP Detail		 Chr1:172027263 Pea15a within coordinates of
Tssr15162 845 bp downstream
 SNP A/G A A A A A A G A A A A A A A A
rs244004231
MGI SNP Detail		 Chr1:172027370 Pea15a within coordinates of
Tssr15162 738 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31572543
MGI SNP Detail		 Chr1:172027377 Pea15a within coordinates of
Tssr15162 731 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221762430
MGI SNP Detail		 Chr1:172027384 Pea15a within coordinates of
Tssr15162 724 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240507480
MGI SNP Detail		 Chr1:172027398 Pea15a within coordinates of
Tssr15162 710 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs259161672
MGI SNP Detail		 Chr1:172027406 Pea15a within coordinates of
Tssr15162 702 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229332864
MGI SNP Detail		 Chr1:172027408 Pea15a within coordinates of
Tssr15162 700 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31572541
MGI SNP Detail		 Chr1:172027420 Pea15a within coordinates of
Tssr15162 688 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs262048770
MGI SNP Detail		 Chr1:172027470 Pea15a within coordinates of
Tssr15162 638 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228498770
MGI SNP Detail		 Chr1:172027491 Pea15a within coordinates of
Tssr15162 617 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251740528
MGI SNP Detail		 Chr1:172027510 Pea15a within coordinates of
Tssr15162 598 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213918336
MGI SNP Detail		 Chr1:172027570 Pea15a within coordinates of
Tssr15162 538 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs586160189
MGI SNP Detail		 Chr1:172027586 Pea15a within coordinates of
Tssr15162 522 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47657620
MGI SNP Detail		 Chr1:172027598 Pea15a within coordinates of
Tssr15162 510 bp downstream
 SNP T T T
rs31572540
MGI SNP Detail		 Chr1:172027650 Pea15a within coordinates of
Tssr15162 458 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs245639957
MGI SNP Detail		 Chr1:172027722 Pea15a within coordinates of
Tssr15162 386 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217085253
MGI SNP Detail		 Chr1:172027726 Pea15a within coordinates of
Tssr15162 382 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239194474
MGI SNP Detail		 Chr1:172027790 Pea15a within coordinates of
Tssr15162 318 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261346891
MGI SNP Detail		 Chr1:172027857 Pea15a within coordinates of
Tssr15162 251 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581663943
MGI SNP Detail		 Chr1:172027868 Pea15a within coordinates of
Tssr15162 240 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31572538
MGI SNP Detail		 Chr1:172028018 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 90 bp downstream
 SNP A/G G G G A G A G G G G G G G G G G
rs251066557
MGI SNP Detail		 Chr1:172028036 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 72 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31572536
MGI SNP Detail		 Chr1:172028168 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 46 bp upstream
 SNP A/C C C A A A C A C A C C A
rs31572535
MGI SNP Detail		 Chr1:172028279 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 157 bp upstream
 SNP C/T C C C C C C C C C C C C C C T
rs31572534
MGI SNP Detail		 Chr1:172028353 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 231 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs52387741
MGI SNP Detail		 Chr1:172028427 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 305 bp upstream
 SNP A/C A C A A C
rs223509319
MGI SNP Detail		 Chr1:172028467 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 345 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs387083966
MGI SNP Detail		 Chr1:172028484 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 362 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C G C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31571713
MGI SNP Detail		 Chr1:172028527 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 405 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs227813150
MGI SNP Detail		 Chr1:172028854 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 732 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31524597
MGI SNP Detail		 Chr1:172028982 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 860 bp upstream
 SNP A/G A A G A A A
rs31784857
MGI SNP Detail		 Chr1:172028996 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 874 bp upstream
 SNP A/G A A G A A A
rs227851473
MGI SNP Detail		 Chr1:172029031 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 909 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31571712
MGI SNP Detail		 Chr1:172029061 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 939 bp upstream
 SNP C/T C C C C T C T C C C C C T C C C C C
rs31571711
MGI SNP Detail		 Chr1:172029067 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 945 bp upstream
 SNP C/G G G G G G C G G G G G G G
rs579122042
MGI SNP Detail		 Chr1:172029176 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1054 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234501673
MGI SNP Detail		 Chr1:172029293 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1171 bp upstream
 SNP C/G/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249531131
MGI SNP Detail		 Chr1:172029327 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1205 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108341123
MGI SNP Detail		 Chr1:172029352 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1230 bp upstream
 SNP G/T T G
rs211771558
MGI SNP Detail		 Chr1:172029377 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1255 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31571709
MGI SNP Detail		 Chr1:172029385 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1263 bp upstream
 SNP A/T T T T T T T A T T T T T T T T
rs48828926
MGI SNP Detail		 Chr1:172029463 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1341 bp upstream
 SNP C/G G G C
rs31571708
MGI SNP Detail		 Chr1:172029562 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1440 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs233800866
MGI SNP Detail		 Chr1:172029624 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1502 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255168938
MGI SNP Detail		 Chr1:172029634 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1512 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225698664
MGI SNP Detail		 Chr1:172029720 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1598 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237259587
MGI SNP Detail		 Chr1:172029723 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1601 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31571707
MGI SNP Detail		 Chr1:172029886 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1764 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs31571706
MGI SNP Detail		 Chr1:172030049 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1927 bp upstream
 SNP C/T C C C C C C C C C C T C C C C
rs31571705
MGI SNP Detail		 Chr1:172030106 Pea15a within coordinates of
Rr28998 within coordinates of
Tssr15162 1984 bp upstream
 SNP C/T T T T T T T C T T T T T T T T
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Showing SNP(s) 1 - 72 of 72
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory