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Mouse SNP Summary
Symbol
Name
ID 		Tssr15175
transcription start site region 15175
MGI:5942942

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227304392
MGI SNP Detail		 Chr1:172037584 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1966 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247612999
MGI SNP Detail		 Chr1:172037632 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1918 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579927648
MGI SNP Detail		 Chr1:172037640 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1910 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs46532526
MGI SNP Detail		 Chr1:172037673 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15168 within coordinates of
Tssr15175 1877 bp downstream
 SNP A/C C A C C C
rs48792872
MGI SNP Detail		 Chr1:172037830 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1720 bp downstream
 SNP A/G G A G G G
rs238619672
MGI SNP Detail		 Chr1:172037887 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15172 within coordinates of
Tssr15175 1663 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52360017
MGI SNP Detail		 Chr1:172037888 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15172 within coordinates of
Tssr15175 1662 bp downstream
 SNP G/T G T G G G
rs227861474
MGI SNP Detail		 Chr1:172037891 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr10179 within coordinates of
Tssr15172 within coordinates of
Tssr15175 1659 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13466551
MGI SNP Detail		 Chr1:172037906 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr10179 within coordinates of
Tssr15175 1644 bp downstream
 SNP G/T T G T
rs52137616
MGI SNP Detail		 Chr1:172037921 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1629 bp downstream
 SNP A/G A A G A
rs586725512
MGI SNP Detail		 Chr1:172037924 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1626 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs52448283
MGI SNP Detail		 Chr1:172037930 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1620 bp downstream
 SNP A/G G G A G
rs52268756
MGI SNP Detail		 Chr1:172037933 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1617 bp downstream
 SNP A/G A A G A
rs580619272
MGI SNP Detail		 Chr1:172037936 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1614 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs50830642
MGI SNP Detail		 Chr1:172038068 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1482 bp downstream
 SNP C/G C C G C C C
rs264257436
MGI SNP Detail		 Chr1:172038104 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1446 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585265990
MGI SNP Detail		 Chr1:172038119 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1431 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G A G A
rs108477754
MGI SNP Detail		 Chr1:172038136 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1414 bp downstream
 SNP A/C A C
rs108086877
MGI SNP Detail		 Chr1:172038142 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1408 bp downstream
 SNP C/T C T C T
rs587102705
MGI SNP Detail		 Chr1:172038144 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1406 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs48944282
MGI SNP Detail		 Chr1:172038148 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1402 bp downstream
 SNP C/T T T C T C T
rs249589367
MGI SNP Detail		 Chr1:172038165 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1385 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs211803083
MGI SNP Detail		 Chr1:172038187 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1363 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232524391
MGI SNP Detail		 Chr1:172038194 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1356 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244834256
MGI SNP Detail		 Chr1:172038214 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1336 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215836529
MGI SNP Detail		 Chr1:172038219 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1331 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237848694
MGI SNP Detail		 Chr1:172038439 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1111 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31568825
MGI SNP Detail		 Chr1:172038566 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 984 bp downstream
 SNP C/G C G G G G C G G G C
rs52128304
MGI SNP Detail		 Chr1:172038591 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 959 bp downstream
 SNP C/T T C T T T
rs47959443
MGI SNP Detail		 Chr1:172038720 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 830 bp downstream
 SNP C/T T C T T T
rs242138038
MGI SNP Detail		 Chr1:172038725 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 825 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248995740
MGI SNP Detail		 Chr1:172038726 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 824 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108789053
MGI SNP Detail		 Chr1:172038869 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 681 bp downstream
 SNP A/T T A
rs32815764
MGI SNP Detail		 Chr1:172038945 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 605 bp downstream
 SNP C/T T C T T T
rs238556307
MGI SNP Detail		 Chr1:172038987 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 563 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249974564
MGI SNP Detail		 Chr1:172039087 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 463 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A C A
rs32022221
MGI SNP Detail		 Chr1:172039098 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 452 bp downstream
 SNP A/G A A G A A A
rs245772896
MGI SNP Detail		 Chr1:172039126 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 424 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs266250897
MGI SNP Detail		 Chr1:172039143 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 407 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233480680
MGI SNP Detail		 Chr1:172039148 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 402 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244578730
MGI SNP Detail		 Chr1:172039167 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 383 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs108925272
MGI SNP Detail		 Chr1:172039172 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 378 bp downstream
 SNP C/T T C T C
rs226348967
MGI SNP Detail		 Chr1:172039173 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 377 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs45688075
MGI SNP Detail		 Chr1:172039196 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 354 bp downstream
 SNP A/G G G A G G G
rs215777371
MGI SNP Detail		 Chr1:172039208 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 342 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47781233
MGI SNP Detail		 Chr1:172039250 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 300 bp downstream
 SNP A/T A A T A A A
rs52028457
MGI SNP Detail		 Chr1:172039262 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 288 bp downstream
 SNP A/G G G A G G G
rs50972532
MGI SNP Detail		 Chr1:172039268 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 282 bp downstream
 SNP A/G A A G A A A
rs31568824
MGI SNP Detail		 Chr1:172039326 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 224 bp downstream
 SNP C/T T T T C T T T T T
rs47475201
MGI SNP Detail		 Chr1:172039339 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 211 bp downstream
 SNP C/T T T C T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49137590
MGI SNP Detail		 Chr1:172039367 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 183 bp downstream
 SNP A/G G G A G G G
rs212199770
MGI SNP Detail		 Chr1:172039410 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 140 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232279885
MGI SNP Detail		 Chr1:172039411 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 139 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50135828
MGI SNP Detail		 Chr1:172039416 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 134 bp downstream
 SNP C/T C C T C C C
rs48980743
MGI SNP Detail		 Chr1:172039488 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 62 bp downstream
 SNP A/G A A G A A A
rs248214229
MGI SNP Detail		 Chr1:172039499 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 51 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs261108018
MGI SNP Detail		 Chr1:172039557 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31567913
MGI SNP Detail		 Chr1:172039608 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 19 bp upstream
 SNP A/G G G G G A A G G G G G
rs238491776
MGI SNP Detail		 Chr1:172039610 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 21 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255719553
MGI SNP Detail		 Chr1:172039637 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 48 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32720838
MGI SNP Detail		 Chr1:172039754 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 165 bp upstream
 SNP A/G A A A G
rs238605092
MGI SNP Detail		 Chr1:172039761 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 172 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259658225
MGI SNP Detail		 Chr1:172039763 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 174 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231460438
MGI SNP Detail		 Chr1:172039820 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 231 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259971952
MGI SNP Detail		 Chr1:172039848 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 259 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31492351
MGI SNP Detail		 Chr1:172039909 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 320 bp upstream
 SNP A/C C C A C
rs32549203
MGI SNP Detail		 Chr1:172039911 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 322 bp upstream
 SNP A/C A A C A
rs31750310
MGI SNP Detail		 Chr1:172039913 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 324 bp upstream
 SNP A/G A A G A
rs584962800
MGI SNP Detail		 Chr1:172039919 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 330 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578891701
MGI SNP Detail		 Chr1:172039920 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 331 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579325376
MGI SNP Detail		 Chr1:172039941 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 352 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31935674
MGI SNP Detail		 Chr1:172039945 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 356 bp upstream
 SNP A/G G G A G A G
rs217839715
MGI SNP Detail		 Chr1:172040023 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 434 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229196763
MGI SNP Detail		 Chr1:172040069 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 480 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242324832
MGI SNP Detail		 Chr1:172040217 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 628 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51035719
MGI SNP Detail		 Chr1:172040315 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 726 bp upstream
 SNP A/G A G A A A
rs232222196
MGI SNP Detail		 Chr1:172040359 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 770 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32664169
MGI SNP Detail		 Chr1:172040417 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 828 bp upstream
 SNP C/T C C T
rs582757738
MGI SNP Detail		 Chr1:172040431 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 842 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217334755
MGI SNP Detail		 Chr1:172040445 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 856 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238059650
MGI SNP Detail		 Chr1:172040467 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 878 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G C G G G G G G G G C G G C G
rs264369574
MGI SNP Detail		 Chr1:172040598 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1009 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226122493
MGI SNP Detail		 Chr1:172040691 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1102 bp upstream
Tssr15177 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49317822
MGI SNP Detail		 Chr1:172040753 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1164 bp upstream
 SNP C/T C T C C C
rs250032981
MGI SNP Detail		 Chr1:172040783 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1194 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220654958
MGI SNP Detail		 Chr1:172040794 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1205 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238507701
MGI SNP Detail		 Chr1:172040795 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1206 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs263411287
MGI SNP Detail		 Chr1:172040842 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1253 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223844463
MGI SNP Detail		 Chr1:172040845 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1256 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G A G
rs248164351
MGI SNP Detail		 Chr1:172040849 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1260 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265888633
MGI SNP Detail		 Chr1:172040850 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1261 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C T C
rs224258774
MGI SNP Detail		 Chr1:172040881 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1292 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C A C C C C C C C C C C C A C
rs49288122
MGI SNP Detail		 Chr1:172040905 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1316 bp upstream
 SNP A/G A G A A A
rs256246286
MGI SNP Detail		 Chr1:172040926 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1337 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G A G
rs225276217
MGI SNP Detail		 Chr1:172040932 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1343 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A A A A A A A A A G A
rs586221513
MGI SNP Detail		 Chr1:172041038 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1449 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31567912
MGI SNP Detail		 Chr1:172041091 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1502 bp upstream
 SNP C/T C C C C C T C C C C
rs216847880
MGI SNP Detail		 Chr1:172041092 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1503 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240175036
MGI SNP Detail		 Chr1:172041165 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1576 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31567911
MGI SNP Detail		 Chr1:172041168 Casq1 within coordinates of
Gm17224 within coordinates of
Tssr15175 1579 bp upstream
 SNP A/G A A A G G A A A A A A
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Showing SNP(s) 1 - 100 of 106
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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